Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10975 and CA264_10980 are separated by 54 nucleotides CA264_10980 and CA264_10985 are separated by 79 nucleotides CA264_10985 and CA264_10990 are separated by 74 nucleotides
CA264_10975: CA264_10975 - Pathogenesis-related transcriptional factor and ERF protein, at 2,531,543 to 2,532,112
_10975
CA264_10980: CA264_10980 - peptidase M23, at 2,532,167 to 2,532,883
_10980
CA264_10985: CA264_10985 - mechanosensitive ion channel protein MscS, at 2,532,963 to 2,533,805
_10985
CA264_10990: CA264_10990 - ABC transporter permease, at 2,533,880 to 2,535,088
_10990
Position (kb)
2532
2533
2534 Strain fitness (log2 ratio)
-2
-1
0
1 at 2531.997 kb on + strand, within CA264_10975 at 2532.018 kb on - strand, within CA264_10975 at 2532.166 kb on + strand at 2532.166 kb on + strand at 2532.167 kb on - strand at 2532.568 kb on + strand, within CA264_10980 at 2532.602 kb on + strand, within CA264_10980 at 2532.603 kb on - strand, within CA264_10980 at 2532.611 kb on + strand, within CA264_10980 at 2532.612 kb on - strand, within CA264_10980 at 2532.742 kb on + strand, within CA264_10980 at 2532.744 kb on + strand, within CA264_10980 at 2532.744 kb on + strand, within CA264_10980 at 2532.809 kb on + strand, within CA264_10980 at 2532.809 kb on + strand, within CA264_10980 at 2532.810 kb on - strand, within CA264_10980 at 2532.881 kb on + strand at 2532.951 kb on + strand at 2532.957 kb on - strand at 2533.015 kb on - strand at 2533.015 kb on - strand at 2533.079 kb on - strand, within CA264_10985 at 2533.079 kb on - strand, within CA264_10985 at 2533.091 kb on - strand, within CA264_10985 at 2533.153 kb on + strand, within CA264_10985 at 2533.160 kb on + strand, within CA264_10985 at 2533.160 kb on + strand, within CA264_10985 at 2533.226 kb on - strand, within CA264_10985 at 2533.415 kb on + strand, within CA264_10985 at 2533.467 kb on + strand, within CA264_10985 at 2533.506 kb on - strand, within CA264_10985 at 2533.537 kb on + strand, within CA264_10985 at 2533.537 kb on + strand, within CA264_10985 at 2533.547 kb on + strand, within CA264_10985 at 2533.548 kb on - strand, within CA264_10985 at 2533.548 kb on - strand, within CA264_10985 at 2533.548 kb on - strand, within CA264_10985 at 2533.549 kb on + strand, within CA264_10985 at 2533.549 kb on + strand, within CA264_10985 at 2533.549 kb on + strand, within CA264_10985 at 2533.550 kb on - strand, within CA264_10985 at 2533.550 kb on - strand, within CA264_10985 at 2533.582 kb on + strand, within CA264_10985 at 2533.634 kb on + strand, within CA264_10985 at 2533.803 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,531,997 + CA264_10975 0.80 +0.6 2,532,018 - CA264_10975 0.83 -0.9 2,532,166 + -1.1 2,532,166 + -0.5 2,532,167 - +0.0 2,532,568 + CA264_10980 0.56 -0.1 2,532,602 + CA264_10980 0.61 -0.8 2,532,603 - CA264_10980 0.61 +0.0 2,532,611 + CA264_10980 0.62 +1.0 2,532,612 - CA264_10980 0.62 -0.3 2,532,742 + CA264_10980 0.80 +0.3 2,532,744 + CA264_10980 0.80 -0.3 2,532,744 + CA264_10980 0.80 -0.7 2,532,809 + CA264_10980 0.90 +0.7 2,532,809 + CA264_10980 0.90 -0.4 2,532,810 - CA264_10980 0.90 -0.9 2,532,881 + +0.2 2,532,951 + -1.5 2,532,957 - -1.1 2,533,015 - -0.6 2,533,015 - -0.8 2,533,079 - CA264_10985 0.14 -0.7 2,533,079 - CA264_10985 0.14 -0.1 2,533,091 - CA264_10985 0.15 -2.7 2,533,153 + CA264_10985 0.23 +0.1 2,533,160 + CA264_10985 0.23 -0.6 2,533,160 + CA264_10985 0.23 -1.8 2,533,226 - CA264_10985 0.31 -2.2 2,533,415 + CA264_10985 0.54 -0.5 2,533,467 + CA264_10985 0.60 -1.2 2,533,506 - CA264_10985 0.64 -0.8 2,533,537 + CA264_10985 0.68 -1.0 2,533,537 + CA264_10985 0.68 -1.1 2,533,547 + CA264_10985 0.69 +0.2 2,533,548 - CA264_10985 0.69 -0.9 2,533,548 - CA264_10985 0.69 -0.6 2,533,548 - CA264_10985 0.69 +0.1 2,533,549 + CA264_10985 0.70 +1.2 2,533,549 + CA264_10985 0.70 -0.3 2,533,549 + CA264_10985 0.70 -1.3 2,533,550 - CA264_10985 0.70 -1.0 2,533,550 - CA264_10985 0.70 -0.3 2,533,582 + CA264_10985 0.73 +0.0 2,533,634 + CA264_10985 0.80 -0.8 2,533,803 + +0.2
Or see this region's nucleotide sequence