Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10145 and CA264_10150 are separated by 858 nucleotides CA264_10150 and CA264_10155 are separated by 9 nucleotides
CA264_10145: CA264_10145 - DUF1275 family protein, at 2,354,596 to 2,355,327
_10145
CA264_10150: CA264_10150 - hypothetical protein, at 2,356,186 to 2,356,497
_10150
CA264_10155: CA264_10155 - hypothetical protein, at 2,356,507 to 2,358,483
_10155
Position (kb)
2356
2357 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2355.283 kb on + strand at 2355.289 kb on - strand at 2355.397 kb on - strand at 2355.405 kb on + strand at 2355.406 kb on - strand at 2355.443 kb on + strand at 2355.444 kb on - strand at 2355.444 kb on - strand at 2355.449 kb on - strand at 2355.449 kb on - strand at 2355.462 kb on + strand at 2355.519 kb on + strand at 2355.520 kb on - strand at 2355.533 kb on + strand at 2355.534 kb on - strand at 2355.538 kb on - strand at 2355.678 kb on + strand at 2355.999 kb on + strand at 2356.055 kb on + strand at 2356.095 kb on + strand at 2356.132 kb on - strand at 2356.133 kb on + strand at 2356.134 kb on - strand at 2356.152 kb on + strand at 2356.156 kb on + strand at 2356.156 kb on + strand at 2356.156 kb on + strand at 2356.185 kb on - strand at 2356.243 kb on + strand, within CA264_10150 at 2356.244 kb on - strand, within CA264_10150 at 2356.264 kb on - strand, within CA264_10150 at 2356.299 kb on + strand, within CA264_10150 at 2356.300 kb on - strand, within CA264_10150 at 2356.300 kb on - strand, within CA264_10150 at 2356.310 kb on - strand, within CA264_10150 at 2356.322 kb on + strand, within CA264_10150 at 2356.323 kb on - strand, within CA264_10150 at 2356.364 kb on + strand, within CA264_10150 at 2356.365 kb on - strand, within CA264_10150 at 2356.463 kb on - strand, within CA264_10150 at 2356.463 kb on - strand, within CA264_10150 at 2356.463 kb on - strand, within CA264_10150 at 2356.490 kb on - strand at 2356.553 kb on - strand at 2356.569 kb on + strand at 2356.570 kb on - strand at 2356.573 kb on - strand at 2356.743 kb on + strand, within CA264_10155 at 2356.743 kb on + strand, within CA264_10155 at 2356.743 kb on + strand, within CA264_10155 at 2356.954 kb on + strand, within CA264_10155 at 2356.985 kb on + strand, within CA264_10155 at 2356.986 kb on - strand, within CA264_10155 at 2356.986 kb on - strand, within CA264_10155 at 2356.987 kb on + strand, within CA264_10155 at 2356.988 kb on - strand, within CA264_10155 at 2356.988 kb on - strand, within CA264_10155 at 2357.199 kb on + strand, within CA264_10155 at 2357.211 kb on + strand, within CA264_10155 at 2357.218 kb on - strand, within CA264_10155 at 2357.360 kb on + strand, within CA264_10155 at 2357.360 kb on + strand, within CA264_10155 at 2357.361 kb on - strand, within CA264_10155 at 2357.365 kb on + strand, within CA264_10155 at 2357.365 kb on + strand, within CA264_10155 at 2357.365 kb on + strand, within CA264_10155 at 2357.383 kb on + strand, within CA264_10155 at 2357.430 kb on + strand, within CA264_10155 at 2357.431 kb on - strand, within CA264_10155 at 2357.435 kb on - strand, within CA264_10155 at 2357.435 kb on - strand, within CA264_10155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,355,283 + +0.1 2,355,289 - -1.3 2,355,397 - -0.2 2,355,405 + -0.3 2,355,406 - -0.8 2,355,443 + -1.0 2,355,444 - -1.3 2,355,444 - -0.9 2,355,449 - -0.8 2,355,449 - -0.7 2,355,462 + -0.2 2,355,519 + +0.8 2,355,520 - -0.4 2,355,533 + +0.4 2,355,534 - -0.1 2,355,538 - -0.5 2,355,678 + +0.4 2,355,999 + +0.1 2,356,055 + -0.6 2,356,095 + +0.2 2,356,132 - -0.3 2,356,133 + -0.6 2,356,134 - +1.3 2,356,152 + -0.6 2,356,156 + -0.0 2,356,156 + -0.5 2,356,156 + -1.1 2,356,185 - +0.3 2,356,243 + CA264_10150 0.18 -0.8 2,356,244 - CA264_10150 0.19 -0.0 2,356,264 - CA264_10150 0.25 +1.5 2,356,299 + CA264_10150 0.36 -0.3 2,356,300 - CA264_10150 0.37 +1.9 2,356,300 - CA264_10150 0.37 +1.2 2,356,310 - CA264_10150 0.40 -0.1 2,356,322 + CA264_10150 0.44 +0.2 2,356,323 - CA264_10150 0.44 +0.0 2,356,364 + CA264_10150 0.57 +0.5 2,356,365 - CA264_10150 0.57 -1.2 2,356,463 - CA264_10150 0.89 +0.2 2,356,463 - CA264_10150 0.89 +0.9 2,356,463 - CA264_10150 0.89 -0.0 2,356,490 - +0.4 2,356,553 - +0.3 2,356,569 + -1.2 2,356,570 - +0.3 2,356,573 - +1.0 2,356,743 + CA264_10155 0.12 +0.3 2,356,743 + CA264_10155 0.12 +0.1 2,356,743 + CA264_10155 0.12 -2.2 2,356,954 + CA264_10155 0.23 +0.8 2,356,985 + CA264_10155 0.24 +0.3 2,356,986 - CA264_10155 0.24 -0.7 2,356,986 - CA264_10155 0.24 +0.4 2,356,987 + CA264_10155 0.24 +0.6 2,356,988 - CA264_10155 0.24 +0.9 2,356,988 - CA264_10155 0.24 +0.3 2,357,199 + CA264_10155 0.35 +1.0 2,357,211 + CA264_10155 0.36 -0.2 2,357,218 - CA264_10155 0.36 -0.5 2,357,360 + CA264_10155 0.43 -0.2 2,357,360 + CA264_10155 0.43 +0.2 2,357,361 - CA264_10155 0.43 -0.9 2,357,365 + CA264_10155 0.43 -0.2 2,357,365 + CA264_10155 0.43 +0.5 2,357,365 + CA264_10155 0.43 +0.0 2,357,383 + CA264_10155 0.44 -0.3 2,357,430 + CA264_10155 0.47 +0.0 2,357,431 - CA264_10155 0.47 +0.2 2,357,435 - CA264_10155 0.47 +0.1 2,357,435 - CA264_10155 0.47 -0.4
Or see this region's nucleotide sequence