Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09290 and CA264_09295 are separated by 360 nucleotides CA264_09295 and CA264_09300 are separated by 251 nucleotides
CA264_09290: CA264_09290 - ribonuclease Z, at 2,173,009 to 2,173,926
_09290
CA264_09295: CA264_09295 - hypothetical protein, at 2,174,287 to 2,175,093
_09295
CA264_09300: CA264_09300 - EamA family transporter, at 2,175,345 to 2,176,259
_09300
Position (kb)
2174
2175
2176 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2173.321 kb on + strand, within CA264_09290 at 2173.388 kb on + strand, within CA264_09290 at 2173.388 kb on + strand, within CA264_09290 at 2173.389 kb on - strand, within CA264_09290 at 2173.412 kb on + strand, within CA264_09290 at 2173.627 kb on + strand, within CA264_09290 at 2173.627 kb on + strand, within CA264_09290 at 2173.628 kb on - strand, within CA264_09290 at 2173.665 kb on - strand, within CA264_09290 at 2173.665 kb on - strand, within CA264_09290 at 2173.673 kb on - strand, within CA264_09290 at 2173.696 kb on + strand, within CA264_09290 at 2173.742 kb on - strand, within CA264_09290 at 2173.743 kb on + strand, within CA264_09290 at 2173.744 kb on - strand, within CA264_09290 at 2173.744 kb on - strand, within CA264_09290 at 2173.755 kb on + strand, within CA264_09290 at 2173.890 kb on - strand at 2173.906 kb on - strand at 2173.924 kb on + strand at 2173.946 kb on - strand at 2174.006 kb on + strand at 2174.007 kb on - strand at 2174.087 kb on + strand at 2174.089 kb on + strand at 2174.090 kb on - strand at 2174.090 kb on - strand at 2174.219 kb on + strand at 2174.219 kb on + strand at 2174.271 kb on - strand at 2174.277 kb on - strand at 2174.277 kb on - strand at 2174.405 kb on + strand, within CA264_09295 at 2174.478 kb on + strand, within CA264_09295 at 2174.532 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.574 kb on + strand, within CA264_09295 at 2174.738 kb on + strand, within CA264_09295 at 2174.831 kb on + strand, within CA264_09295 at 2174.906 kb on - strand, within CA264_09295 at 2174.925 kb on + strand, within CA264_09295 at 2174.926 kb on - strand, within CA264_09295 at 2174.959 kb on + strand, within CA264_09295 at 2174.960 kb on - strand, within CA264_09295 at 2174.960 kb on - strand, within CA264_09295 at 2175.004 kb on + strand, within CA264_09295 at 2175.005 kb on - strand, within CA264_09295 at 2175.016 kb on + strand at 2175.059 kb on + strand at 2175.060 kb on - strand at 2175.113 kb on + strand at 2175.155 kb on + strand at 2175.156 kb on - strand at 2175.158 kb on - strand at 2175.219 kb on + strand at 2175.220 kb on - strand at 2175.220 kb on - strand at 2175.248 kb on + strand at 2175.302 kb on - strand at 2175.344 kb on + strand at 2175.344 kb on + strand at 2175.344 kb on + strand at 2175.344 kb on + strand at 2175.345 kb on - strand at 2175.435 kb on - strand at 2175.578 kb on + strand, within CA264_09300 at 2175.838 kb on - strand, within CA264_09300 at 2175.940 kb on + strand, within CA264_09300
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 2,173,321 + CA264_09290 0.34 +1.5 2,173,388 + CA264_09290 0.41 +0.0 2,173,388 + CA264_09290 0.41 -0.1 2,173,389 - CA264_09290 0.41 -0.1 2,173,412 + CA264_09290 0.44 -0.8 2,173,627 + CA264_09290 0.67 -0.4 2,173,627 + CA264_09290 0.67 +0.9 2,173,628 - CA264_09290 0.67 -2.1 2,173,665 - CA264_09290 0.71 -0.4 2,173,665 - CA264_09290 0.71 -0.8 2,173,673 - CA264_09290 0.72 -0.9 2,173,696 + CA264_09290 0.75 -0.8 2,173,742 - CA264_09290 0.80 -0.4 2,173,743 + CA264_09290 0.80 -1.0 2,173,744 - CA264_09290 0.80 -0.9 2,173,744 - CA264_09290 0.80 -0.3 2,173,755 + CA264_09290 0.81 +0.3 2,173,890 - -0.3 2,173,906 - -0.9 2,173,924 + -0.4 2,173,946 - +0.4 2,174,006 + -0.4 2,174,007 - +1.2 2,174,087 + -0.5 2,174,089 + +3.3 2,174,090 - -0.5 2,174,090 - +0.1 2,174,219 + -0.3 2,174,219 + -1.2 2,174,271 - +0.7 2,174,277 - -0.7 2,174,277 - +0.1 2,174,405 + CA264_09295 0.15 -1.2 2,174,478 + CA264_09295 0.24 -0.4 2,174,532 + CA264_09295 0.30 +0.4 2,174,574 + CA264_09295 0.36 -0.1 2,174,574 + CA264_09295 0.36 +0.5 2,174,574 + CA264_09295 0.36 +0.9 2,174,574 + CA264_09295 0.36 -0.4 2,174,738 + CA264_09295 0.56 -0.7 2,174,831 + CA264_09295 0.67 +1.9 2,174,906 - CA264_09295 0.77 -0.3 2,174,925 + CA264_09295 0.79 +1.4 2,174,926 - CA264_09295 0.79 +0.5 2,174,959 + CA264_09295 0.83 +0.8 2,174,960 - CA264_09295 0.83 +0.5 2,174,960 - CA264_09295 0.83 +0.6 2,175,004 + CA264_09295 0.89 -0.3 2,175,005 - CA264_09295 0.89 -0.1 2,175,016 + -0.0 2,175,059 + -0.4 2,175,060 - -0.7 2,175,113 + +1.8 2,175,155 + +1.8 2,175,156 - -0.9 2,175,158 - -0.3 2,175,219 + +0.0 2,175,220 - -0.5 2,175,220 - +0.3 2,175,248 + +0.6 2,175,302 - +0.1 2,175,344 + -0.3 2,175,344 + -0.8 2,175,344 + -0.5 2,175,344 + -0.1 2,175,345 - -1.2 2,175,435 - -2.9 2,175,578 + CA264_09300 0.25 -1.6 2,175,838 - CA264_09300 0.54 -1.4 2,175,940 + CA264_09300 0.65 -1.2
Or see this region's nucleotide sequence