Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07060 and CA264_07065 are separated by 5 nucleotides CA264_07065 and CA264_07070 are separated by 320 nucleotides
CA264_07060: CA264_07060 - toxic anion resistance protein, at 1,627,308 to 1,628,393
_07060
CA264_07065: CA264_07065 - hypothetical protein, at 1,628,399 to 1,628,839
_07065
CA264_07070: CA264_07070 - DNA polymerase III subunit epsilon, at 1,629,160 to 1,629,714
_07070
Position (kb)
1628
1629 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1627.488 kb on + strand, within CA264_07060 at 1627.489 kb on - strand, within CA264_07060 at 1627.489 kb on - strand, within CA264_07060 at 1627.495 kb on - strand, within CA264_07060 at 1627.495 kb on - strand, within CA264_07060 at 1627.685 kb on + strand, within CA264_07060 at 1627.685 kb on + strand, within CA264_07060 at 1627.685 kb on + strand, within CA264_07060 at 1627.686 kb on - strand, within CA264_07060 at 1627.686 kb on - strand, within CA264_07060 at 1627.686 kb on - strand, within CA264_07060 at 1627.690 kb on - strand, within CA264_07060 at 1627.690 kb on - strand, within CA264_07060 at 1627.690 kb on - strand, within CA264_07060 at 1627.760 kb on + strand, within CA264_07060 at 1627.805 kb on + strand, within CA264_07060 at 1627.834 kb on - strand, within CA264_07060 at 1627.834 kb on - strand, within CA264_07060 at 1627.941 kb on + strand, within CA264_07060 at 1627.942 kb on - strand, within CA264_07060 at 1627.952 kb on + strand, within CA264_07060 at 1627.954 kb on + strand, within CA264_07060 at 1627.954 kb on + strand, within CA264_07060 at 1627.970 kb on + strand, within CA264_07060 at 1627.970 kb on - strand, within CA264_07060 at 1627.991 kb on + strand, within CA264_07060 at 1628.066 kb on + strand, within CA264_07060 at 1628.066 kb on + strand, within CA264_07060 at 1628.066 kb on + strand, within CA264_07060 at 1628.067 kb on - strand, within CA264_07060 at 1628.330 kb on + strand at 1628.331 kb on - strand at 1628.331 kb on - strand at 1628.419 kb on + strand at 1628.419 kb on + strand at 1628.419 kb on + strand at 1628.419 kb on + strand at 1628.420 kb on - strand at 1628.423 kb on + strand at 1628.423 kb on + strand at 1628.424 kb on - strand at 1628.424 kb on - strand at 1628.441 kb on + strand at 1628.442 kb on - strand at 1628.489 kb on + strand, within CA264_07065 at 1628.499 kb on + strand, within CA264_07065 at 1628.499 kb on + strand, within CA264_07065 at 1628.499 kb on + strand, within CA264_07065 at 1628.500 kb on - strand, within CA264_07065 at 1628.509 kb on - strand, within CA264_07065 at 1628.618 kb on + strand, within CA264_07065 at 1628.645 kb on + strand, within CA264_07065 at 1628.796 kb on + strand at 1628.801 kb on + strand at 1628.802 kb on - strand at 1628.886 kb on + strand at 1628.949 kb on + strand at 1628.968 kb on + strand at 1629.286 kb on + strand, within CA264_07070 at 1629.287 kb on - strand, within CA264_07070 at 1629.462 kb on + strand, within CA264_07070 at 1629.473 kb on + strand, within CA264_07070 at 1629.473 kb on + strand, within CA264_07070 at 1629.474 kb on - strand, within CA264_07070 at 1629.474 kb on - strand, within CA264_07070 at 1629.702 kb on - strand at 1629.742 kb on + strand at 1629.743 kb on - strand at 1629.743 kb on - strand at 1629.743 kb on - strand at 1629.747 kb on + strand at 1629.798 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 1,627,488 + CA264_07060 0.17 +0.4 1,627,489 - CA264_07060 0.17 +0.7 1,627,489 - CA264_07060 0.17 +0.7 1,627,495 - CA264_07060 0.17 -0.6 1,627,495 - CA264_07060 0.17 +1.2 1,627,685 + CA264_07060 0.35 +0.7 1,627,685 + CA264_07060 0.35 +0.3 1,627,685 + CA264_07060 0.35 +0.0 1,627,686 - CA264_07060 0.35 +0.5 1,627,686 - CA264_07060 0.35 +0.6 1,627,686 - CA264_07060 0.35 +0.5 1,627,690 - CA264_07060 0.35 +1.4 1,627,690 - CA264_07060 0.35 +1.5 1,627,690 - CA264_07060 0.35 +0.6 1,627,760 + CA264_07060 0.42 +0.1 1,627,805 + CA264_07060 0.46 +0.6 1,627,834 - CA264_07060 0.48 +1.2 1,627,834 - CA264_07060 0.48 +0.6 1,627,941 + CA264_07060 0.58 -2.8 1,627,942 - CA264_07060 0.58 +0.6 1,627,952 + CA264_07060 0.59 -0.5 1,627,954 + CA264_07060 0.59 +0.6 1,627,954 + CA264_07060 0.59 +0.1 1,627,970 + CA264_07060 0.61 +0.2 1,627,970 - CA264_07060 0.61 +0.9 1,627,991 + CA264_07060 0.63 -0.3 1,628,066 + CA264_07060 0.70 +1.3 1,628,066 + CA264_07060 0.70 +0.2 1,628,066 + CA264_07060 0.70 -0.8 1,628,067 - CA264_07060 0.70 +0.8 1,628,330 + +0.0 1,628,331 - +0.8 1,628,331 - +0.0 1,628,419 + +0.2 1,628,419 + -0.1 1,628,419 + +0.4 1,628,419 + +0.5 1,628,420 - +1.4 1,628,423 + -0.2 1,628,423 + -0.0 1,628,424 - +0.1 1,628,424 - +1.1 1,628,441 + +0.1 1,628,442 - +0.6 1,628,489 + CA264_07065 0.20 +0.0 1,628,499 + CA264_07065 0.23 +0.2 1,628,499 + CA264_07065 0.23 +2.3 1,628,499 + CA264_07065 0.23 +0.3 1,628,500 - CA264_07065 0.23 +3.4 1,628,509 - CA264_07065 0.25 +0.9 1,628,618 + CA264_07065 0.50 +0.5 1,628,645 + CA264_07065 0.56 +0.8 1,628,796 + +0.6 1,628,801 + +1.3 1,628,802 - +1.7 1,628,886 + +0.1 1,628,949 + +0.8 1,628,968 + +0.9 1,629,286 + CA264_07070 0.23 +1.6 1,629,287 - CA264_07070 0.23 +1.3 1,629,462 + CA264_07070 0.54 -0.3 1,629,473 + CA264_07070 0.56 +0.5 1,629,473 + CA264_07070 0.56 +0.5 1,629,474 - CA264_07070 0.57 -0.3 1,629,474 - CA264_07070 0.57 +0.8 1,629,702 - +1.5 1,629,742 + +0.6 1,629,743 - +1.4 1,629,743 - +1.4 1,629,743 - +1.4 1,629,747 + -0.1 1,629,798 + +0.3
Or see this region's nucleotide sequence