Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06230 and CA264_06235 overlap by 1 nucleotides CA264_06235 and CA264_06240 are separated by 99 nucleotides CA264_06240 and CA264_06245 overlap by 1 nucleotides
CA264_06230: CA264_06230 - acetylornithine deacetylase, at 1,449,983 to 1,451,059
_06230
CA264_06235: CA264_06235 - acetylglutamate kinase, at 1,451,059 to 1,451,847
_06235
CA264_06240: CA264_06240 - acetylornithine carbamoyltransferase, at 1,451,947 to 1,452,897
_06240
CA264_06245: CA264_06245 - aspartate aminotransferase family protein, at 1,452,897 to 1,454,051
_06245
Position (kb)
1451
1452
1453 Strain fitness (log2 ratio)
-1
0
1 at 1450.988 kb on - strand at 1451.040 kb on + strand at 1451.061 kb on - strand at 1451.071 kb on + strand at 1451.227 kb on - strand, within CA264_06235 at 1451.228 kb on + strand, within CA264_06235 at 1451.228 kb on + strand, within CA264_06235 at 1451.228 kb on + strand, within CA264_06235 at 1451.228 kb on + strand, within CA264_06235 at 1451.229 kb on - strand, within CA264_06235 at 1451.229 kb on - strand, within CA264_06235 at 1451.229 kb on - strand, within CA264_06235 at 1451.229 kb on - strand, within CA264_06235 at 1451.262 kb on + strand, within CA264_06235 at 1451.605 kb on + strand, within CA264_06235 at 1451.667 kb on + strand, within CA264_06235 at 1451.667 kb on + strand, within CA264_06235 at 1451.746 kb on + strand, within CA264_06235 at 1451.836 kb on + strand at 1451.839 kb on + strand at 1451.841 kb on + strand at 1451.841 kb on + strand at 1451.842 kb on - strand at 1451.847 kb on + strand at 1451.914 kb on + strand at 1451.920 kb on + strand at 1451.920 kb on + strand at 1451.920 kb on + strand at 1451.920 kb on + strand at 1451.927 kb on - strand at 1451.927 kb on - strand at 1451.933 kb on + strand at 1452.014 kb on - strand at 1452.038 kb on - strand at 1452.107 kb on - strand, within CA264_06240 at 1452.194 kb on + strand, within CA264_06240 at 1452.276 kb on - strand, within CA264_06240 at 1452.291 kb on + strand, within CA264_06240 at 1452.429 kb on + strand, within CA264_06240 at 1452.429 kb on + strand, within CA264_06240 at 1452.429 kb on + strand, within CA264_06240 at 1452.506 kb on - strand, within CA264_06240 at 1452.507 kb on + strand, within CA264_06240 at 1452.532 kb on - strand, within CA264_06240 at 1452.621 kb on + strand, within CA264_06240 at 1452.772 kb on + strand, within CA264_06240 at 1452.772 kb on + strand, within CA264_06240 at 1452.809 kb on + strand at 1452.809 kb on + strand at 1452.815 kb on + strand at 1452.888 kb on - strand at 1453.037 kb on - strand, within CA264_06245 at 1453.037 kb on - strand, within CA264_06245 at 1453.123 kb on - strand, within CA264_06245 at 1453.123 kb on - strand, within CA264_06245 at 1453.164 kb on + strand, within CA264_06245 at 1453.164 kb on + strand, within CA264_06245 at 1453.165 kb on - strand, within CA264_06245 at 1453.241 kb on - strand, within CA264_06245 at 1453.284 kb on + strand, within CA264_06245 at 1453.416 kb on + strand, within CA264_06245 at 1453.590 kb on - strand, within CA264_06245 at 1453.881 kb on + strand, within CA264_06245 at 1453.882 kb on - strand, within CA264_06245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 1,450,988 - -0.2 1,451,040 + +0.1 1,451,061 - +0.1 1,451,071 + -0.3 1,451,227 - CA264_06235 0.21 -0.1 1,451,228 + CA264_06235 0.21 +0.1 1,451,228 + CA264_06235 0.21 -1.0 1,451,228 + CA264_06235 0.21 -0.2 1,451,228 + CA264_06235 0.21 +0.3 1,451,229 - CA264_06235 0.22 -0.1 1,451,229 - CA264_06235 0.22 +0.3 1,451,229 - CA264_06235 0.22 -0.3 1,451,229 - CA264_06235 0.22 +0.7 1,451,262 + CA264_06235 0.26 +0.0 1,451,605 + CA264_06235 0.69 -0.0 1,451,667 + CA264_06235 0.77 -0.4 1,451,667 + CA264_06235 0.77 +1.1 1,451,746 + CA264_06235 0.87 -0.2 1,451,836 + -0.1 1,451,839 + +0.2 1,451,841 + +0.2 1,451,841 + -0.0 1,451,842 - -1.7 1,451,847 + -0.8 1,451,914 + -0.1 1,451,920 + -0.8 1,451,920 + -0.3 1,451,920 + +0.0 1,451,920 + -0.1 1,451,927 - -1.7 1,451,927 - -0.5 1,451,933 + -0.1 1,452,014 - +0.4 1,452,038 - +0.2 1,452,107 - CA264_06240 0.17 -1.0 1,452,194 + CA264_06240 0.26 +0.1 1,452,276 - CA264_06240 0.35 +0.4 1,452,291 + CA264_06240 0.36 +1.5 1,452,429 + CA264_06240 0.51 +0.2 1,452,429 + CA264_06240 0.51 -0.3 1,452,429 + CA264_06240 0.51 +0.6 1,452,506 - CA264_06240 0.59 -0.3 1,452,507 + CA264_06240 0.59 +1.2 1,452,532 - CA264_06240 0.62 +0.0 1,452,621 + CA264_06240 0.71 +0.8 1,452,772 + CA264_06240 0.87 -0.6 1,452,772 + CA264_06240 0.87 +0.1 1,452,809 + +0.3 1,452,809 + +0.0 1,452,815 + -0.3 1,452,888 - +1.2 1,453,037 - CA264_06245 0.12 -0.4 1,453,037 - CA264_06245 0.12 +0.4 1,453,123 - CA264_06245 0.20 -0.8 1,453,123 - CA264_06245 0.20 -0.3 1,453,164 + CA264_06245 0.23 -0.1 1,453,164 + CA264_06245 0.23 +0.6 1,453,165 - CA264_06245 0.23 -1.3 1,453,241 - CA264_06245 0.30 +0.1 1,453,284 + CA264_06245 0.34 +0.2 1,453,416 + CA264_06245 0.45 +0.0 1,453,590 - CA264_06245 0.60 -0.1 1,453,881 + CA264_06245 0.85 -0.2 1,453,882 - CA264_06245 0.85 -1.2
Or see this region's nucleotide sequence