Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03155

Experiment: m.b. Fusidic 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03150 and CA264_03155 are separated by 244 nucleotidesCA264_03155 and CA264_03160 are separated by 3 nucleotidesCA264_03160 and CA264_03165 are separated by 228 nucleotides CA264_03150: CA264_03150 - hypothetical protein, at 736,035 to 737,237 _03150 CA264_03155: CA264_03155 - hypothetical protein, at 737,482 to 738,237 _03155 CA264_03160: CA264_03160 - metallophosphoesterase, at 738,241 to 738,984 _03160 CA264_03165: CA264_03165 - acyl-CoA desaturase, at 739,213 to 740,283 _03165 Position (kb) 737 738 739Strain fitness (log2 ratio) -2 -1 0 1 2 3at 736.487 kb on - strand, within CA264_03150at 736.487 kb on - strand, within CA264_03150at 736.520 kb on + strand, within CA264_03150at 736.530 kb on - strand, within CA264_03150at 736.530 kb on - strand, within CA264_03150at 736.596 kb on + strand, within CA264_03150at 736.597 kb on - strand, within CA264_03150at 736.601 kb on + strand, within CA264_03150at 736.602 kb on - strand, within CA264_03150at 736.638 kb on + strand, within CA264_03150at 736.638 kb on + strand, within CA264_03150at 736.639 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.644 kb on - strand, within CA264_03150at 736.752 kb on + strand, within CA264_03150at 736.752 kb on + strand, within CA264_03150at 736.753 kb on - strand, within CA264_03150at 736.753 kb on - strand, within CA264_03150at 736.760 kb on + strand, within CA264_03150at 736.760 kb on + strand, within CA264_03150at 736.760 kb on + strand, within CA264_03150at 736.772 kb on + strand, within CA264_03150at 736.773 kb on - strand, within CA264_03150at 736.773 kb on - strand, within CA264_03150at 736.891 kb on - strand, within CA264_03150at 736.900 kb on - strand, within CA264_03150at 736.938 kb on + strand, within CA264_03150at 737.157 kb on + strandat 737.158 kb on - strandat 737.158 kb on - strandat 737.161 kb on + strandat 737.162 kb on - strandat 737.162 kb on - strandat 737.162 kb on - strandat 737.163 kb on + strandat 737.163 kb on + strandat 737.163 kb on + strandat 737.164 kb on - strandat 737.164 kb on - strandat 737.164 kb on - strandat 737.164 kb on - strandat 737.238 kb on + strandat 737.487 kb on + strandat 737.492 kb on + strandat 737.501 kb on + strandat 737.584 kb on - strand, within CA264_03155at 737.623 kb on - strand, within CA264_03155at 737.781 kb on + strand, within CA264_03155at 737.902 kb on + strand, within CA264_03155at 737.903 kb on - strand, within CA264_03155at 737.951 kb on + strand, within CA264_03155at 737.952 kb on - strand, within CA264_03155at 737.968 kb on - strand, within CA264_03155at 738.210 kb on + strandat 738.215 kb on + strandat 738.215 kb on + strandat 738.233 kb on + strandat 738.234 kb on - strandat 738.240 kb on + strandat 738.240 kb on + strandat 738.241 kb on - strandat 738.241 kb on - strandat 738.282 kb on - strandat 738.289 kb on - strandat 738.289 kb on - strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.328 kb on + strand, within CA264_03160at 738.396 kb on + strand, within CA264_03160at 738.475 kb on + strand, within CA264_03160at 738.666 kb on - strand, within CA264_03160at 738.748 kb on + strand, within CA264_03160at 738.967 kb on + strandat 738.968 kb on - strandat 738.970 kb on - strandat 739.000 kb on + strandat 739.001 kb on - strandat 739.023 kb on + strandat 739.043 kb on + strandat 739.069 kb on - strandat 739.069 kb on - strandat 739.072 kb on + strandat 739.120 kb on + strandat 739.123 kb on - strandat 739.133 kb on + strandat 739.140 kb on + strandat 739.140 kb on + strandat 739.140 kb on + strandat 739.169 kb on + strandat 739.169 kb on + strandat 739.191 kb on + strandat 739.213 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml
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736,487 - CA264_03150 0.38 +0.1
736,487 - CA264_03150 0.38 +0.8
736,520 + CA264_03150 0.40 -0.7
736,530 - CA264_03150 0.41 -0.4
736,530 - CA264_03150 0.41 +0.4
736,596 + CA264_03150 0.47 +0.2
736,597 - CA264_03150 0.47 -0.3
736,601 + CA264_03150 0.47 -1.0
736,602 - CA264_03150 0.47 -0.0
736,638 + CA264_03150 0.50 +0.1
736,638 + CA264_03150 0.50 -1.0
736,639 - CA264_03150 0.50 +0.3
736,642 - CA264_03150 0.50 -0.3
736,642 - CA264_03150 0.50 +0.6
736,642 - CA264_03150 0.50 -1.3
736,642 - CA264_03150 0.50 -0.5
736,642 - CA264_03150 0.50 +0.3
736,642 - CA264_03150 0.50 -0.4
736,644 - CA264_03150 0.51 -0.9
736,752 + CA264_03150 0.60 -1.4
736,752 + CA264_03150 0.60 -0.7
736,753 - CA264_03150 0.60 +0.2
736,753 - CA264_03150 0.60 -0.5
736,760 + CA264_03150 0.60 -0.2
736,760 + CA264_03150 0.60 +0.0
736,760 + CA264_03150 0.60 +0.0
736,772 + CA264_03150 0.61 -0.6
736,773 - CA264_03150 0.61 +1.0
736,773 - CA264_03150 0.61 -0.5
736,891 - CA264_03150 0.71 -1.1
736,900 - CA264_03150 0.72 -0.4
736,938 + CA264_03150 0.75 +0.2
737,157 + +0.8
737,158 - +0.3
737,158 - +1.9
737,161 + -0.2
737,162 - -1.0
737,162 - -0.0
737,162 - -0.1
737,163 + -1.5
737,163 + -0.5
737,163 + +0.7
737,164 - +1.3
737,164 - +0.3
737,164 - +1.2
737,164 - +0.5
737,238 + -0.3
737,487 + -0.3
737,492 + -0.5
737,501 + +0.2
737,584 - CA264_03155 0.13 +0.3
737,623 - CA264_03155 0.19 -0.4
737,781 + CA264_03155 0.40 +1.2
737,902 + CA264_03155 0.56 -0.1
737,903 - CA264_03155 0.56 -0.2
737,951 + CA264_03155 0.62 +0.9
737,952 - CA264_03155 0.62 +0.5
737,968 - CA264_03155 0.64 +0.5
738,210 + -0.5
738,215 + +1.1
738,215 + -0.2
738,233 + -0.4
738,234 - -0.6
738,240 + -0.6
738,240 + -0.5
738,241 - -0.0
738,241 - +0.2
738,282 - -0.6
738,289 - -0.2
738,289 - +0.8
738,290 + +3.5
738,290 + -0.6
738,290 + -0.1
738,290 + +0.0
738,290 + -0.7
738,290 + -0.5
738,290 + -0.7
738,291 - -0.1
738,291 - -0.4
738,291 - -1.1
738,291 - +0.3
738,291 - -0.4
738,291 - -0.3
738,291 - -0.4
738,328 + CA264_03160 0.12 -0.7
738,396 + CA264_03160 0.21 -0.0
738,475 + CA264_03160 0.31 +1.5
738,666 - CA264_03160 0.57 +0.2
738,748 + CA264_03160 0.68 +0.4
738,967 + -2.4
738,968 - +0.5
738,970 - +1.6
739,000 + -0.2
739,001 - +2.0
739,023 + +0.0
739,043 + -0.4
739,069 - -0.3
739,069 - +0.0
739,072 + -0.5
739,120 + -0.1
739,123 - +0.2
739,133 + +0.1
739,140 + +0.1
739,140 + +0.5
739,140 + -0.2
739,169 + -1.1
739,169 + -1.0
739,191 + -1.6
739,213 - -0.3

Or see this region's nucleotide sequence