Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19055 and CA264_19060 are separated by 83 nucleotides CA264_19060 and CA264_19065 are separated by 6 nucleotides CA264_19065 and CA264_19070 are separated by 160 nucleotides
CA264_19055: CA264_19055 - epimerase, at 4,428,631 to 4,429,605
_19055
CA264_19060: CA264_19060 - hypothetical protein, at 4,429,689 to 4,431,086
_19060
CA264_19065: CA264_19065 - phosphosulfolactate synthase, at 4,431,093 to 4,431,866
_19065
CA264_19070: CA264_19070 - DUF368 domain-containing protein, at 4,432,027 to 4,432,926
_19070
Position (kb)
4429
4430
4431
4432 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4428.732 kb on - strand, within CA264_19055 at 4428.824 kb on - strand, within CA264_19055 at 4428.854 kb on - strand, within CA264_19055 at 4428.888 kb on - strand, within CA264_19055 at 4428.911 kb on + strand, within CA264_19055 at 4428.911 kb on + strand, within CA264_19055 at 4428.911 kb on + strand, within CA264_19055 at 4428.939 kb on + strand, within CA264_19055 at 4429.180 kb on + strand, within CA264_19055 at 4429.229 kb on + strand, within CA264_19055 at 4429.322 kb on - strand, within CA264_19055 at 4429.625 kb on + strand at 4429.640 kb on + strand at 4429.640 kb on + strand at 4429.641 kb on - strand at 4429.641 kb on - strand at 4429.641 kb on - strand at 4429.645 kb on - strand at 4429.645 kb on - strand at 4429.798 kb on - strand at 4429.799 kb on + strand at 4429.813 kb on - strand at 4429.815 kb on - strand at 4429.832 kb on + strand, within CA264_19060 at 4429.832 kb on + strand, within CA264_19060 at 4429.833 kb on - strand, within CA264_19060 at 4429.833 kb on - strand, within CA264_19060 at 4429.833 kb on - strand, within CA264_19060 at 4429.873 kb on - strand, within CA264_19060 at 4430.047 kb on + strand, within CA264_19060 at 4430.047 kb on + strand, within CA264_19060 at 4430.048 kb on - strand, within CA264_19060 at 4430.048 kb on - strand, within CA264_19060 at 4430.048 kb on - strand, within CA264_19060 at 4430.093 kb on + strand, within CA264_19060 at 4430.093 kb on + strand, within CA264_19060 at 4430.095 kb on + strand, within CA264_19060 at 4430.096 kb on - strand, within CA264_19060 at 4430.098 kb on - strand, within CA264_19060 at 4430.098 kb on - strand, within CA264_19060 at 4430.098 kb on - strand, within CA264_19060 at 4430.102 kb on + strand, within CA264_19060 at 4430.155 kb on - strand, within CA264_19060 at 4430.157 kb on + strand, within CA264_19060 at 4430.158 kb on - strand, within CA264_19060 at 4430.158 kb on - strand, within CA264_19060 at 4430.214 kb on + strand, within CA264_19060 at 4430.215 kb on - strand, within CA264_19060 at 4430.286 kb on + strand, within CA264_19060 at 4430.292 kb on + strand, within CA264_19060 at 4430.327 kb on + strand, within CA264_19060 at 4430.327 kb on + strand, within CA264_19060 at 4430.327 kb on + strand, within CA264_19060 at 4430.328 kb on - strand, within CA264_19060 at 4430.367 kb on + strand, within CA264_19060 at 4430.442 kb on + strand, within CA264_19060 at 4430.444 kb on + strand, within CA264_19060 at 4430.445 kb on - strand, within CA264_19060 at 4430.505 kb on + strand, within CA264_19060 at 4430.505 kb on + strand, within CA264_19060 at 4430.510 kb on + strand, within CA264_19060 at 4430.670 kb on - strand, within CA264_19060 at 4430.876 kb on - strand, within CA264_19060 at 4430.913 kb on + strand, within CA264_19060 at 4430.916 kb on + strand, within CA264_19060 at 4430.931 kb on + strand, within CA264_19060 at 4430.932 kb on - strand, within CA264_19060 at 4430.953 kb on - strand at 4430.965 kb on - strand at 4431.896 kb on - strand at 4431.896 kb on - strand at 4431.963 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 4,428,732 - CA264_19055 0.10 -0.5 4,428,824 - CA264_19055 0.20 -1.9 4,428,854 - CA264_19055 0.23 -2.1 4,428,888 - CA264_19055 0.26 +0.4 4,428,911 + CA264_19055 0.29 -0.7 4,428,911 + CA264_19055 0.29 -1.1 4,428,911 + CA264_19055 0.29 -2.5 4,428,939 + CA264_19055 0.32 +0.7 4,429,180 + CA264_19055 0.56 -0.6 4,429,229 + CA264_19055 0.61 -1.4 4,429,322 - CA264_19055 0.71 -1.1 4,429,625 + -4.0 4,429,640 + -1.3 4,429,640 + -0.9 4,429,641 - -0.9 4,429,641 - -0.8 4,429,641 - -1.2 4,429,645 - +0.5 4,429,645 - +0.4 4,429,798 - -0.6 4,429,799 + -0.3 4,429,813 - -1.6 4,429,815 - -1.6 4,429,832 + CA264_19060 0.10 -0.8 4,429,832 + CA264_19060 0.10 -1.6 4,429,833 - CA264_19060 0.10 -1.0 4,429,833 - CA264_19060 0.10 -1.1 4,429,833 - CA264_19060 0.10 -0.6 4,429,873 - CA264_19060 0.13 +1.2 4,430,047 + CA264_19060 0.26 +0.1 4,430,047 + CA264_19060 0.26 -2.7 4,430,048 - CA264_19060 0.26 -0.4 4,430,048 - CA264_19060 0.26 -0.6 4,430,048 - CA264_19060 0.26 -0.4 4,430,093 + CA264_19060 0.29 -1.1 4,430,093 + CA264_19060 0.29 -1.3 4,430,095 + CA264_19060 0.29 -1.4 4,430,096 - CA264_19060 0.29 -1.4 4,430,098 - CA264_19060 0.29 -1.3 4,430,098 - CA264_19060 0.29 -0.9 4,430,098 - CA264_19060 0.29 -1.2 4,430,102 + CA264_19060 0.30 -1.1 4,430,155 - CA264_19060 0.33 -0.3 4,430,157 + CA264_19060 0.33 +0.4 4,430,158 - CA264_19060 0.34 +2.7 4,430,158 - CA264_19060 0.34 -0.3 4,430,214 + CA264_19060 0.38 -0.5 4,430,215 - CA264_19060 0.38 -1.2 4,430,286 + CA264_19060 0.43 -1.3 4,430,292 + CA264_19060 0.43 +0.2 4,430,327 + CA264_19060 0.46 -0.1 4,430,327 + CA264_19060 0.46 -1.2 4,430,327 + CA264_19060 0.46 -0.8 4,430,328 - CA264_19060 0.46 +2.1 4,430,367 + CA264_19060 0.48 -1.5 4,430,442 + CA264_19060 0.54 -1.2 4,430,444 + CA264_19060 0.54 +0.9 4,430,445 - CA264_19060 0.54 -1.3 4,430,505 + CA264_19060 0.58 -1.0 4,430,505 + CA264_19060 0.58 -0.4 4,430,510 + CA264_19060 0.59 -0.6 4,430,670 - CA264_19060 0.70 -1.2 4,430,876 - CA264_19060 0.85 +0.4 4,430,913 + CA264_19060 0.88 -0.8 4,430,916 + CA264_19060 0.88 +0.3 4,430,931 + CA264_19060 0.89 -1.0 4,430,932 - CA264_19060 0.89 +0.3 4,430,953 - -1.3 4,430,965 - +0.7 4,431,896 - -2.6 4,431,896 - -1.5 4,431,963 - -0.2
Or see this region's nucleotide sequence