Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17905 and CA264_17910 are separated by 2 nucleotides CA264_17910 and CA264_17915 are separated by 23 nucleotides
CA264_17905: CA264_17905 - UDP-glucose 4-epimerase GalE, at 4,162,651 to 4,163,685
_17905
CA264_17910: CA264_17910 - dTDP-glucose 4,6-dehydratase, at 4,163,688 to 4,164,737
_17910
CA264_17915: CA264_17915 - LPS biosynthesis protein WbpP, at 4,164,761 to 4,165,786
_17915
Position (kb) 4163
4164
4165 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4162.690 kb on + strand at 4162.691 kb on - strand at 4162.692 kb on + strand at 4162.693 kb on - strand at 4162.712 kb on + strand at 4162.722 kb on - strand at 4162.733 kb on - strand at 4162.799 kb on + strand, within CA264_17905 at 4162.800 kb on - strand, within CA264_17905 at 4162.800 kb on - strand, within CA264_17905 at 4162.909 kb on + strand, within CA264_17905 at 4162.910 kb on - strand, within CA264_17905 at 4162.911 kb on + strand, within CA264_17905 at 4162.912 kb on - strand, within CA264_17905 at 4162.920 kb on - strand at 4162.948 kb on + strand, within CA264_17905 at 4162.948 kb on + strand, within CA264_17905 at 4162.948 kb on + strand, within CA264_17905 at 4163.011 kb on - strand, within CA264_17905 at 4163.044 kb on + strand, within CA264_17905 at 4163.044 kb on + strand, within CA264_17905 at 4163.044 kb on + strand, within CA264_17905 at 4163.175 kb on - strand, within CA264_17905 at 4163.175 kb on - strand, within CA264_17905 at 4163.275 kb on - strand, within CA264_17905 at 4163.292 kb on - strand, within CA264_17905 at 4163.362 kb on + strand, within CA264_17905 at 4163.362 kb on + strand, within CA264_17905 at 4163.363 kb on - strand, within CA264_17905 at 4163.527 kb on + strand, within CA264_17905 at 4163.579 kb on + strand, within CA264_17905 at 4163.579 kb on + strand, within CA264_17905 at 4163.579 kb on + strand, within CA264_17905 at 4163.586 kb on - strand at 4163.635 kb on - strand at 4163.661 kb on - strand at 4164.685 kb on + strand at 4164.709 kb on - strand at 4164.725 kb on + strand at 4164.758 kb on + strand at 4164.759 kb on - strand at 4164.760 kb on + strand at 4164.760 kb on + strand at 4164.869 kb on - strand, within CA264_17915 at 4164.923 kb on - strand, within CA264_17915 at 4164.991 kb on + strand, within CA264_17915 at 4165.079 kb on - strand, within CA264_17915 at 4165.262 kb on + strand, within CA264_17915 at 4165.520 kb on + strand, within CA264_17915 at 4165.698 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 4,162,690 + -0.8 4,162,691 - -0.9 4,162,692 + -1.5 4,162,693 - -2.0 4,162,712 + -1.1 4,162,722 - -0.8 4,162,733 - -0.1 4,162,799 + CA264_17905 0.14 -0.9 4,162,800 - CA264_17905 0.14 -1.1 4,162,800 - CA264_17905 0.14 -2.1 4,162,909 + CA264_17905 0.25 -1.2 4,162,910 - CA264_17905 0.25 -3.4 4,162,911 + CA264_17905 0.25 -0.2 4,162,912 - CA264_17905 0.25 -1.9 4,162,920 - +1.1 4,162,948 + CA264_17905 0.29 -2.1 4,162,948 + CA264_17905 0.29 -3.6 4,162,948 + CA264_17905 0.29 -2.0 4,163,011 - CA264_17905 0.35 -2.3 4,163,044 + CA264_17905 0.38 -1.5 4,163,044 + CA264_17905 0.38 -2.1 4,163,044 + CA264_17905 0.38 -3.1 4,163,175 - CA264_17905 0.51 -0.5 4,163,175 - CA264_17905 0.51 -0.9 4,163,275 - CA264_17905 0.60 -1.2 4,163,292 - CA264_17905 0.62 -2.5 4,163,362 + CA264_17905 0.69 -2.0 4,163,362 + CA264_17905 0.69 -2.3 4,163,363 - CA264_17905 0.69 -1.7 4,163,527 + CA264_17905 0.85 -0.6 4,163,579 + CA264_17905 0.90 -2.1 4,163,579 + CA264_17905 0.90 -2.0 4,163,579 + CA264_17905 0.90 -0.3 4,163,586 - -0.6 4,163,635 - +0.7 4,163,661 - +1.0 4,164,685 + -0.1 4,164,709 - +0.4 4,164,725 + -0.6 4,164,758 + -0.5 4,164,759 - +0.0 4,164,760 + +0.7 4,164,760 + +0.6 4,164,869 - CA264_17915 0.11 -1.1 4,164,923 - CA264_17915 0.16 -0.7 4,164,991 + CA264_17915 0.22 -0.3 4,165,079 - CA264_17915 0.31 -0.9 4,165,262 + CA264_17915 0.49 -1.7 4,165,520 + CA264_17915 0.74 +1.1 4,165,698 + +0.9
Or see this region's nucleotide sequence