Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16945
Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,943,681 | + | -0.6 | |||
3,943,691 | + | -0.6 | |||
3,943,692 | - | -1.0 | |||
3,944,578 | + | -0.4 | |||
3,944,596 | - | +0.1 | |||
3,944,624 | + | +1.0 | |||
3,944,625 | - | -1.2 | |||
3,944,628 | - | +2.3 | |||
3,944,707 | + | CA264_16945 | 0.18 | +0.2 | |
3,944,728 | + | CA264_16945 | 0.23 | -1.3 | |
3,945,048 | - | +0.4 | |||
3,945,071 | + | +0.1 | |||
3,945,119 | - | -0.0 | |||
3,945,124 | + | +0.5 | |||
3,945,125 | - | +0.9 | |||
3,945,133 | + | +0.3 | |||
3,945,133 | + | +1.2 | |||
3,945,137 | + | +0.4 | |||
3,945,168 | - | -0.4 | |||
3,945,197 | + | -0.3 | |||
3,945,212 | - | -0.4 | |||
3,945,213 | + | +1.0 | |||
3,945,213 | + | +0.1 | |||
3,945,255 | + | -1.2 | |||
3,945,256 | - | +0.3 | |||
3,945,259 | + | +0.0 | |||
3,945,259 | + | +0.4 | |||
3,945,259 | + | +0.2 | |||
3,945,260 | - | -0.2 | |||
3,945,261 | + | -0.5 | |||
3,945,262 | - | -0.2 | |||
3,945,262 | - | -0.8 | |||
3,945,262 | - | +0.3 |
Or see this region's nucleotide sequence