Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11245 and CA264_11250 are separated by 39 nucleotides CA264_11250 and CA264_11255 are separated by 204 nucleotides CA264_11255 and CA264_11260 are separated by 389 nucleotides
CA264_11245: CA264_11245 - hypothetical protein, at 2,603,797 to 2,604,012
_11245
CA264_11250: CA264_11250 - hypothetical protein, at 2,604,052 to 2,604,663
_11250
CA264_11255: CA264_11255 - peptidase M13, at 2,604,868 to 2,606,928
_11255
CA264_11260: CA264_11260 - DNA gyrase subunit B, at 2,607,318 to 2,609,276
_11260
Position (kb)
2604
2605
2606
2607 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2603.959 kb on + strand, within CA264_11245 at 2603.961 kb on + strand, within CA264_11245 at 2603.965 kb on - strand, within CA264_11245 at 2603.982 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.990 kb on - strand, within CA264_11245 at 2603.992 kb on + strand at 2603.992 kb on + strand at 2603.992 kb on + strand at 2604.012 kb on + strand at 2604.072 kb on + strand at 2604.072 kb on + strand at 2604.078 kb on + strand at 2604.079 kb on - strand at 2604.173 kb on - strand, within CA264_11250 at 2604.197 kb on + strand, within CA264_11250 at 2604.197 kb on + strand, within CA264_11250 at 2604.201 kb on + strand, within CA264_11250 at 2604.202 kb on - strand, within CA264_11250 at 2604.202 kb on - strand, within CA264_11250 at 2604.212 kb on + strand, within CA264_11250 at 2604.212 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.222 kb on + strand, within CA264_11250 at 2604.222 kb on + strand, within CA264_11250 at 2604.223 kb on - strand, within CA264_11250 at 2604.383 kb on - strand, within CA264_11250 at 2604.385 kb on - strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.390 kb on + strand, within CA264_11250 at 2604.426 kb on + strand, within CA264_11250 at 2604.426 kb on + strand, within CA264_11250 at 2604.466 kb on - strand, within CA264_11250 at 2604.507 kb on - strand, within CA264_11250 at 2604.540 kb on + strand, within CA264_11250 at 2604.540 kb on + strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.542 kb on + strand, within CA264_11250 at 2604.543 kb on - strand, within CA264_11250 at 2604.553 kb on + strand, within CA264_11250 at 2604.557 kb on + strand, within CA264_11250 at 2604.558 kb on - strand, within CA264_11250 at 2604.558 kb on - strand, within CA264_11250 at 2604.610 kb on + strand at 2604.697 kb on + strand at 2604.839 kb on + strand at 2604.854 kb on + strand at 2604.854 kb on + strand at 2604.909 kb on + strand at 2604.910 kb on - strand at 2604.951 kb on + strand at 2604.951 kb on + strand at 2605.107 kb on + strand, within CA264_11255 at 2605.142 kb on + strand, within CA264_11255 at 2605.152 kb on + strand, within CA264_11255 at 2605.152 kb on + strand, within CA264_11255 at 2605.153 kb on - strand, within CA264_11255 at 2605.163 kb on - strand, within CA264_11255 at 2605.189 kb on - strand, within CA264_11255 at 2605.226 kb on + strand, within CA264_11255 at 2605.236 kb on - strand, within CA264_11255 at 2605.475 kb on + strand, within CA264_11255 at 2605.475 kb on + strand, within CA264_11255 at 2605.479 kb on - strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.554 kb on + strand, within CA264_11255 at 2605.555 kb on - strand, within CA264_11255 at 2605.555 kb on - strand, within CA264_11255 at 2605.557 kb on - strand, within CA264_11255 at 2605.808 kb on + strand, within CA264_11255 at 2605.858 kb on - strand, within CA264_11255 at 2605.858 kb on - strand, within CA264_11255 at 2606.040 kb on + strand, within CA264_11255 at 2606.148 kb on + strand, within CA264_11255 at 2606.148 kb on + strand, within CA264_11255 at 2606.153 kb on + strand, within CA264_11255 at 2606.154 kb on - strand, within CA264_11255 at 2606.179 kb on + strand, within CA264_11255 at 2606.180 kb on - strand, within CA264_11255 at 2606.291 kb on + strand, within CA264_11255 at 2606.291 kb on + strand, within CA264_11255 at 2606.291 kb on + strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.292 kb on - strand, within CA264_11255 at 2606.301 kb on - strand, within CA264_11255 at 2606.343 kb on - strand, within CA264_11255 at 2606.343 kb on - strand, within CA264_11255 at 2606.346 kb on - strand, within CA264_11255 at 2606.397 kb on + strand, within CA264_11255 at 2606.398 kb on - strand, within CA264_11255 at 2606.401 kb on + strand, within CA264_11255 at 2606.401 kb on + strand, within CA264_11255 at 2606.402 kb on - strand, within CA264_11255 at 2606.427 kb on - strand, within CA264_11255 at 2606.427 kb on - strand, within CA264_11255 at 2606.468 kb on + strand, within CA264_11255 at 2606.543 kb on + strand, within CA264_11255 at 2606.553 kb on + strand, within CA264_11255 at 2606.585 kb on + strand, within CA264_11255 at 2606.585 kb on + strand, within CA264_11255 at 2606.585 kb on + strand, within CA264_11255 at 2606.586 kb on - strand, within CA264_11255 at 2606.586 kb on - strand, within CA264_11255 at 2606.596 kb on + strand, within CA264_11255 at 2606.596 kb on + strand, within CA264_11255 at 2606.676 kb on + strand, within CA264_11255 at 2606.765 kb on + strand at 2606.808 kb on + strand at 2606.857 kb on + strand at 2606.857 kb on + strand at 2606.858 kb on - strand at 2606.887 kb on + strand at 2606.941 kb on + strand at 2606.942 kb on - strand at 2606.946 kb on - strand at 2606.951 kb on + strand at 2607.003 kb on - strand at 2607.008 kb on - strand at 2607.008 kb on - strand at 2607.047 kb on + strand at 2607.047 kb on + strand at 2607.048 kb on - strand at 2607.066 kb on + strand at 2607.066 kb on + strand at 2607.067 kb on - strand at 2607.067 kb on - strand at 2607.068 kb on + strand at 2607.068 kb on + strand at 2607.068 kb on + strand at 2607.083 kb on - strand at 2607.134 kb on + strand at 2607.198 kb on + strand at 2607.199 kb on - strand at 2607.246 kb on - strand at 2607.272 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 2,603,959 + CA264_11245 0.75 +0.1 2,603,961 + CA264_11245 0.76 +0.3 2,603,965 - CA264_11245 0.78 -0.4 2,603,982 + CA264_11245 0.86 -1.0 2,603,989 + CA264_11245 0.89 -0.7 2,603,989 + CA264_11245 0.89 -1.7 2,603,989 + CA264_11245 0.89 +0.1 2,603,990 - CA264_11245 0.89 -1.8 2,603,992 + -0.7 2,603,992 + +0.3 2,603,992 + -0.2 2,604,012 + -0.7 2,604,072 + +0.6 2,604,072 + +0.3 2,604,078 + -0.7 2,604,079 - -0.4 2,604,173 - CA264_11250 0.20 -0.7 2,604,197 + CA264_11250 0.24 -0.3 2,604,197 + CA264_11250 0.24 +0.3 2,604,201 + CA264_11250 0.24 +0.5 2,604,202 - CA264_11250 0.25 -0.0 2,604,202 - CA264_11250 0.25 -0.8 2,604,212 + CA264_11250 0.26 -0.6 2,604,212 - CA264_11250 0.26 -0.2 2,604,213 - CA264_11250 0.26 -0.0 2,604,213 - CA264_11250 0.26 +0.1 2,604,213 - CA264_11250 0.26 -0.1 2,604,216 + CA264_11250 0.27 -0.9 2,604,216 + CA264_11250 0.27 -0.9 2,604,216 + CA264_11250 0.27 -0.7 2,604,216 + CA264_11250 0.27 -0.3 2,604,216 + CA264_11250 0.27 -1.0 2,604,216 + CA264_11250 0.27 +0.5 2,604,216 + CA264_11250 0.27 -0.4 2,604,217 - CA264_11250 0.27 +2.5 2,604,217 - CA264_11250 0.27 -0.4 2,604,217 - CA264_11250 0.27 +0.1 2,604,217 - CA264_11250 0.27 -0.5 2,604,218 + CA264_11250 0.27 -0.1 2,604,218 + CA264_11250 0.27 +0.5 2,604,218 + CA264_11250 0.27 +0.0 2,604,218 + CA264_11250 0.27 -0.1 2,604,218 + CA264_11250 0.27 +0.2 2,604,219 - CA264_11250 0.27 +0.4 2,604,219 - CA264_11250 0.27 -0.5 2,604,219 - CA264_11250 0.27 +0.6 2,604,219 - CA264_11250 0.27 -0.7 2,604,222 + CA264_11250 0.28 -1.8 2,604,222 + CA264_11250 0.28 -0.3 2,604,223 - CA264_11250 0.28 -1.2 2,604,383 - CA264_11250 0.54 +0.5 2,604,385 - CA264_11250 0.54 -0.5 2,604,388 + CA264_11250 0.55 -0.2 2,604,388 + CA264_11250 0.55 -0.6 2,604,388 + CA264_11250 0.55 -1.2 2,604,388 + CA264_11250 0.55 -0.2 2,604,388 + CA264_11250 0.55 +0.6 2,604,388 + CA264_11250 0.55 +0.2 2,604,388 + CA264_11250 0.55 -0.3 2,604,389 - CA264_11250 0.55 -0.8 2,604,389 - CA264_11250 0.55 +1.5 2,604,389 - CA264_11250 0.55 +0.1 2,604,390 + CA264_11250 0.55 -1.0 2,604,426 + CA264_11250 0.61 -0.4 2,604,426 + CA264_11250 0.61 +0.4 2,604,466 - CA264_11250 0.68 -0.0 2,604,507 - CA264_11250 0.74 +0.0 2,604,540 + CA264_11250 0.80 +0.7 2,604,540 + CA264_11250 0.80 +0.1 2,604,541 - CA264_11250 0.80 -0.6 2,604,541 - CA264_11250 0.80 -0.8 2,604,541 - CA264_11250 0.80 +0.2 2,604,542 + CA264_11250 0.80 +0.0 2,604,543 - CA264_11250 0.80 +0.3 2,604,553 + CA264_11250 0.82 +0.4 2,604,557 + CA264_11250 0.83 -1.1 2,604,558 - CA264_11250 0.83 -1.8 2,604,558 - CA264_11250 0.83 -0.3 2,604,610 + -0.0 2,604,697 + -0.1 2,604,839 + -0.3 2,604,854 + +1.5 2,604,854 + +0.5 2,604,909 + +0.8 2,604,910 - -0.2 2,604,951 + +0.1 2,604,951 + -0.3 2,605,107 + CA264_11255 0.12 +0.3 2,605,142 + CA264_11255 0.13 -0.5 2,605,152 + CA264_11255 0.14 +0.9 2,605,152 + CA264_11255 0.14 -0.2 2,605,153 - CA264_11255 0.14 +0.5 2,605,163 - CA264_11255 0.14 -0.5 2,605,189 - CA264_11255 0.16 +0.7 2,605,226 + CA264_11255 0.17 -0.9 2,605,236 - CA264_11255 0.18 +0.2 2,605,475 + CA264_11255 0.29 +0.1 2,605,475 + CA264_11255 0.29 -0.4 2,605,479 - CA264_11255 0.30 -0.5 2,605,543 + CA264_11255 0.33 +0.0 2,605,543 + CA264_11255 0.33 -0.3 2,605,543 + CA264_11255 0.33 -0.7 2,605,554 + CA264_11255 0.33 +0.4 2,605,555 - CA264_11255 0.33 +1.1 2,605,555 - CA264_11255 0.33 -2.2 2,605,557 - CA264_11255 0.33 -0.0 2,605,808 + CA264_11255 0.46 -0.0 2,605,858 - CA264_11255 0.48 +0.0 2,605,858 - CA264_11255 0.48 +0.0 2,606,040 + CA264_11255 0.57 -0.0 2,606,148 + CA264_11255 0.62 -0.6 2,606,148 + CA264_11255 0.62 -0.4 2,606,153 + CA264_11255 0.62 -0.2 2,606,154 - CA264_11255 0.62 +0.8 2,606,179 + CA264_11255 0.64 -0.1 2,606,180 - CA264_11255 0.64 +0.1 2,606,291 + CA264_11255 0.69 -0.7 2,606,291 + CA264_11255 0.69 -0.3 2,606,291 + CA264_11255 0.69 -0.1 2,606,292 - CA264_11255 0.69 +0.4 2,606,292 - CA264_11255 0.69 -2.7 2,606,292 - CA264_11255 0.69 -0.3 2,606,292 - CA264_11255 0.69 +0.1 2,606,301 - CA264_11255 0.70 +0.2 2,606,343 - CA264_11255 0.72 -1.2 2,606,343 - CA264_11255 0.72 -0.9 2,606,346 - CA264_11255 0.72 -0.6 2,606,397 + CA264_11255 0.74 -0.5 2,606,398 - CA264_11255 0.74 +0.6 2,606,401 + CA264_11255 0.74 -0.1 2,606,401 + CA264_11255 0.74 -0.2 2,606,402 - CA264_11255 0.74 +0.7 2,606,427 - CA264_11255 0.76 +0.4 2,606,427 - CA264_11255 0.76 +0.2 2,606,468 + CA264_11255 0.78 -0.4 2,606,543 + CA264_11255 0.81 -1.0 2,606,553 + CA264_11255 0.82 +0.2 2,606,585 + CA264_11255 0.83 +1.9 2,606,585 + CA264_11255 0.83 +0.7 2,606,585 + CA264_11255 0.83 -0.3 2,606,586 - CA264_11255 0.83 -0.6 2,606,586 - CA264_11255 0.83 -1.0 2,606,596 + CA264_11255 0.84 -1.2 2,606,596 + CA264_11255 0.84 -0.5 2,606,676 + CA264_11255 0.88 -0.2 2,606,765 + -0.1 2,606,808 + +2.2 2,606,857 + +0.1 2,606,857 + +0.1 2,606,858 - -0.4 2,606,887 + +0.4 2,606,941 + +0.5 2,606,942 - +0.3 2,606,946 - +0.1 2,606,951 + +0.9 2,607,003 - -0.2 2,607,008 - -0.7 2,607,008 - -0.8 2,607,047 + -0.3 2,607,047 + -0.8 2,607,048 - -0.4 2,607,066 + -0.1 2,607,066 + +0.5 2,607,067 - -0.8 2,607,067 - +0.3 2,607,068 + +0.5 2,607,068 + -0.6 2,607,068 + -0.6 2,607,083 - -0.5 2,607,134 + +0.2 2,607,198 + -0.4 2,607,199 - +1.0 2,607,246 - +1.2 2,607,272 - +0.1
Or see this region's nucleotide sequence