Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11110 and CA264_11115 are separated by 45 nucleotides CA264_11115 and CA264_11120 are separated by 48 nucleotides
CA264_11110: CA264_11110 - SNase-like nuclease, at 2,565,635 to 2,566,471
_11110
CA264_11115: CA264_11115 - hypothetical protein, at 2,566,517 to 2,566,942
_11115
CA264_11120: CA264_11120 - universal stress protein UspA, at 2,566,991 to 2,567,845
_11120
Position (kb)
2566
2567 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2565.551 kb on + strand at 2565.551 kb on + strand at 2565.552 kb on - strand at 2565.552 kb on - strand at 2565.553 kb on + strand at 2565.553 kb on + strand at 2565.553 kb on + strand at 2565.554 kb on - strand at 2565.557 kb on + strand at 2565.651 kb on - strand at 2565.738 kb on + strand, within CA264_11110 at 2565.738 kb on + strand, within CA264_11110 at 2565.739 kb on - strand, within CA264_11110 at 2565.739 kb on - strand, within CA264_11110 at 2565.748 kb on + strand, within CA264_11110 at 2565.748 kb on + strand, within CA264_11110 at 2565.748 kb on + strand, within CA264_11110 at 2565.749 kb on - strand, within CA264_11110 at 2565.861 kb on + strand, within CA264_11110 at 2565.861 kb on + strand, within CA264_11110 at 2565.861 kb on + strand, within CA264_11110 at 2565.862 kb on - strand, within CA264_11110 at 2565.862 kb on - strand, within CA264_11110 at 2565.865 kb on - strand, within CA264_11110 at 2565.927 kb on + strand, within CA264_11110 at 2565.928 kb on - strand, within CA264_11110 at 2565.929 kb on + strand, within CA264_11110 at 2565.929 kb on + strand, within CA264_11110 at 2565.941 kb on - strand, within CA264_11110 at 2565.983 kb on + strand, within CA264_11110 at 2565.999 kb on + strand, within CA264_11110 at 2566.148 kb on - strand, within CA264_11110 at 2566.323 kb on - strand, within CA264_11110 at 2566.353 kb on - strand, within CA264_11110 at 2566.353 kb on - strand, within CA264_11110 at 2566.359 kb on + strand, within CA264_11110 at 2566.360 kb on - strand, within CA264_11110 at 2566.483 kb on + strand at 2566.484 kb on - strand at 2566.511 kb on - strand at 2566.511 kb on - strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.515 kb on - strand at 2566.515 kb on - strand at 2566.517 kb on - strand at 2566.536 kb on + strand at 2566.537 kb on - strand at 2566.671 kb on + strand, within CA264_11115 at 2566.672 kb on - strand, within CA264_11115 at 2566.766 kb on - strand, within CA264_11115 at 2566.813 kb on + strand, within CA264_11115 at 2566.868 kb on + strand, within CA264_11115 at 2566.896 kb on + strand, within CA264_11115 at 2566.897 kb on - strand, within CA264_11115 at 2566.897 kb on - strand, within CA264_11115 at 2566.903 kb on + strand at 2566.904 kb on - strand at 2566.932 kb on + strand at 2566.933 kb on - strand at 2566.941 kb on - strand at 2566.992 kb on + strand at 2567.038 kb on - strand at 2567.066 kb on - strand at 2567.124 kb on - strand, within CA264_11120 at 2567.144 kb on + strand, within CA264_11120 at 2567.352 kb on + strand, within CA264_11120 at 2567.353 kb on - strand, within CA264_11120 at 2567.353 kb on - strand, within CA264_11120 at 2567.517 kb on + strand, within CA264_11120 at 2567.571 kb on - strand, within CA264_11120 at 2567.571 kb on - strand, within CA264_11120 at 2567.578 kb on - strand, within CA264_11120 at 2567.633 kb on - strand, within CA264_11120 at 2567.778 kb on + strand at 2567.778 kb on + strand at 2567.778 kb on + strand at 2567.779 kb on - strand at 2567.787 kb on + strand at 2567.788 kb on - strand at 2567.832 kb on - strand at 2567.885 kb on + strand at 2567.886 kb on - strand at 2567.887 kb on + strand at 2567.898 kb on + strand at 2567.899 kb on - strand at 2567.901 kb on + strand at 2567.902 kb on - strand at 2567.905 kb on + strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 2,565,551 + +0.8 2,565,551 + +0.5 2,565,552 - +0.9 2,565,552 - -0.0 2,565,553 + -1.3 2,565,553 + -0.1 2,565,553 + -0.4 2,565,554 - -0.4 2,565,557 + -0.5 2,565,651 - -1.2 2,565,738 + CA264_11110 0.12 +0.3 2,565,738 + CA264_11110 0.12 +0.0 2,565,739 - CA264_11110 0.12 +0.4 2,565,739 - CA264_11110 0.12 -0.4 2,565,748 + CA264_11110 0.14 -1.1 2,565,748 + CA264_11110 0.14 -0.0 2,565,748 + CA264_11110 0.14 -0.8 2,565,749 - CA264_11110 0.14 +0.4 2,565,861 + CA264_11110 0.27 -0.6 2,565,861 + CA264_11110 0.27 +0.2 2,565,861 + CA264_11110 0.27 -0.1 2,565,862 - CA264_11110 0.27 -0.8 2,565,862 - CA264_11110 0.27 -1.5 2,565,865 - CA264_11110 0.27 -0.0 2,565,927 + CA264_11110 0.35 -1.3 2,565,928 - CA264_11110 0.35 +0.2 2,565,929 + CA264_11110 0.35 +0.9 2,565,929 + CA264_11110 0.35 -0.2 2,565,941 - CA264_11110 0.37 +0.6 2,565,983 + CA264_11110 0.42 +0.3 2,565,999 + CA264_11110 0.43 +2.5 2,566,148 - CA264_11110 0.61 +0.4 2,566,323 - CA264_11110 0.82 +0.5 2,566,353 - CA264_11110 0.86 -0.8 2,566,353 - CA264_11110 0.86 -0.4 2,566,359 + CA264_11110 0.86 -1.9 2,566,360 - CA264_11110 0.87 -0.7 2,566,483 + -0.6 2,566,484 - -0.0 2,566,511 - -0.7 2,566,511 - +0.0 2,566,514 + +0.7 2,566,514 + -0.1 2,566,514 + +0.0 2,566,514 + +0.1 2,566,515 - +0.7 2,566,515 - +0.5 2,566,517 - -0.4 2,566,536 + -1.2 2,566,537 - -1.1 2,566,671 + CA264_11115 0.36 -1.0 2,566,672 - CA264_11115 0.36 -0.1 2,566,766 - CA264_11115 0.58 +0.0 2,566,813 + CA264_11115 0.69 +0.2 2,566,868 + CA264_11115 0.82 -0.6 2,566,896 + CA264_11115 0.89 +0.6 2,566,897 - CA264_11115 0.89 -0.4 2,566,897 - CA264_11115 0.89 -0.0 2,566,903 + +0.2 2,566,904 - -0.0 2,566,932 + +0.5 2,566,933 - -0.0 2,566,941 - +0.2 2,566,992 + +0.2 2,567,038 - +0.1 2,567,066 - +0.7 2,567,124 - CA264_11120 0.16 -0.5 2,567,144 + CA264_11120 0.18 -0.3 2,567,352 + CA264_11120 0.42 -1.0 2,567,353 - CA264_11120 0.42 +0.3 2,567,353 - CA264_11120 0.42 +0.0 2,567,517 + CA264_11120 0.62 -2.3 2,567,571 - CA264_11120 0.68 -2.1 2,567,571 - CA264_11120 0.68 +0.7 2,567,578 - CA264_11120 0.69 -1.8 2,567,633 - CA264_11120 0.75 -0.2 2,567,778 + -2.5 2,567,778 + -0.9 2,567,778 + -1.2 2,567,779 - -0.0 2,567,787 + -0.1 2,567,788 - -0.6 2,567,832 - -0.3 2,567,885 + -0.8 2,567,886 - -0.7 2,567,887 + -1.0 2,567,898 + -1.4 2,567,899 - -1.1 2,567,901 + +0.2 2,567,902 - -1.0 2,567,905 + -1.6 2,567,906 - -0.6 2,567,906 - +0.3 2,567,906 - +0.4 2,567,906 - -1.9 2,567,918 - -0.4
Or see this region's nucleotide sequence