Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03660 and CA264_03665 are separated by 492 nucleotides CA264_03665 and CA264_03670 are separated by 95 nucleotides CA264_03670 and CA264_03675 are separated by 346 nucleotides
CA264_03660: CA264_03660 - hypothetical protein, at 855,436 to 855,912
_03660
CA264_03665: CA264_03665 - FUSC family protein, at 856,405 to 857,457
_03665
CA264_03670: CA264_03670 - polyisoprenoid-binding protein, at 857,553 to 858,086
_03670
CA264_03675: CA264_03675 - hypothetical protein, at 858,433 to 859,383
_03675
Position (kb) 856
857
858 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 855.427 kb on + strand at 855.504 kb on + strand, within CA264_03660 at 855.743 kb on - strand, within CA264_03660 at 855.824 kb on - strand, within CA264_03660 at 855.863 kb on - strand, within CA264_03660 at 855.863 kb on - strand, within CA264_03660 at 855.869 kb on + strand at 855.870 kb on - strand at 855.917 kb on + strand at 855.918 kb on - strand at 855.953 kb on + strand at 855.954 kb on - strand at 855.958 kb on + strand at 855.978 kb on - strand at 855.982 kb on + strand at 855.996 kb on + strand at 856.190 kb on + strand at 856.192 kb on + strand at 856.196 kb on + strand at 856.196 kb on + strand at 856.197 kb on - strand at 856.225 kb on - strand at 856.309 kb on - strand at 856.311 kb on + strand at 856.330 kb on - strand at 856.411 kb on - strand at 856.428 kb on - strand at 856.477 kb on - strand at 856.501 kb on + strand at 856.561 kb on + strand, within CA264_03665 at 856.561 kb on + strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.693 kb on + strand, within CA264_03665 at 856.720 kb on + strand, within CA264_03665 at 856.721 kb on - strand, within CA264_03665 at 856.721 kb on - strand, within CA264_03665 at 856.723 kb on + strand, within CA264_03665 at 856.724 kb on - strand, within CA264_03665 at 856.729 kb on - strand, within CA264_03665 at 856.729 kb on - strand, within CA264_03665 at 856.869 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.874 kb on - strand, within CA264_03665 at 856.874 kb on - strand, within CA264_03665 at 856.939 kb on + strand, within CA264_03665 at 857.201 kb on + strand, within CA264_03665 at 857.202 kb on - strand, within CA264_03665 at 857.244 kb on + strand, within CA264_03665 at 857.251 kb on - strand, within CA264_03665 at 857.251 kb on - strand, within CA264_03665 at 857.258 kb on + strand, within CA264_03665 at 857.259 kb on - strand, within CA264_03665 at 857.402 kb on - strand at 857.402 kb on - strand at 857.455 kb on + strand at 857.456 kb on - strand at 857.481 kb on - strand at 857.536 kb on + strand at 857.538 kb on + strand at 857.538 kb on + strand at 857.566 kb on - strand at 857.746 kb on - strand, within CA264_03670 at 857.796 kb on - strand, within CA264_03670 at 857.840 kb on + strand, within CA264_03670 at 857.840 kb on + strand, within CA264_03670 at 857.926 kb on - strand, within CA264_03670 at 857.980 kb on - strand, within CA264_03670 at 858.063 kb on + strand at 858.063 kb on + strand at 858.064 kb on - strand at 858.086 kb on + strand at 858.086 kb on + strand at 858.086 kb on + strand at 858.090 kb on - strand at 858.090 kb on - strand at 858.115 kb on - strand at 858.158 kb on - strand at 858.158 kb on - strand at 858.190 kb on - strand at 858.229 kb on - strand at 858.250 kb on + strand at 858.278 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml remove 855,427 + -0.4 855,504 + CA264_03660 0.14 -1.0 855,743 - CA264_03660 0.64 -1.3 855,824 - CA264_03660 0.81 -1.2 855,863 - CA264_03660 0.90 -0.9 855,863 - CA264_03660 0.90 +0.1 855,869 + -0.9 855,870 - +0.0 855,917 + -0.8 855,918 - -1.0 855,953 + +0.6 855,954 - -1.0 855,958 + -0.3 855,978 - -1.0 855,982 + +1.8 855,996 + +0.1 856,190 + +1.3 856,192 + -0.6 856,196 + -0.0 856,196 + -0.2 856,197 - -0.2 856,225 - +2.0 856,309 - +1.1 856,311 + -0.1 856,330 - +0.4 856,411 - +0.6 856,428 - -0.4 856,477 - -1.1 856,501 + +0.4 856,561 + CA264_03665 0.15 -0.1 856,561 + CA264_03665 0.15 +0.2 856,562 - CA264_03665 0.15 -0.4 856,562 - CA264_03665 0.15 -0.6 856,562 - CA264_03665 0.15 -1.0 856,599 - CA264_03665 0.18 +0.2 856,599 - CA264_03665 0.18 -1.1 856,599 - CA264_03665 0.18 -1.2 856,693 + CA264_03665 0.27 -0.7 856,720 + CA264_03665 0.30 -0.1 856,721 - CA264_03665 0.30 -0.3 856,721 - CA264_03665 0.30 -1.1 856,723 + CA264_03665 0.30 +0.8 856,724 - CA264_03665 0.30 -1.4 856,729 - CA264_03665 0.31 +0.1 856,729 - CA264_03665 0.31 -0.5 856,869 + CA264_03665 0.44 -0.7 856,873 + CA264_03665 0.44 +1.6 856,873 + CA264_03665 0.44 -1.3 856,873 + CA264_03665 0.44 -0.2 856,874 - CA264_03665 0.45 -0.5 856,874 - CA264_03665 0.45 -0.5 856,939 + CA264_03665 0.51 -0.2 857,201 + CA264_03665 0.76 +0.6 857,202 - CA264_03665 0.76 -0.5 857,244 + CA264_03665 0.80 -0.1 857,251 - CA264_03665 0.80 -0.1 857,251 - CA264_03665 0.80 -0.6 857,258 + CA264_03665 0.81 -0.0 857,259 - CA264_03665 0.81 -0.5 857,402 - +1.9 857,402 - -1.7 857,455 + -1.4 857,456 - -1.0 857,481 - +0.2 857,536 + +1.1 857,538 + +0.2 857,538 + +0.5 857,566 - +0.0 857,746 - CA264_03670 0.36 -0.4 857,796 - CA264_03670 0.46 -0.1 857,840 + CA264_03670 0.54 +2.1 857,840 + CA264_03670 0.54 -0.1 857,926 - CA264_03670 0.70 +0.3 857,980 - CA264_03670 0.80 -0.2 858,063 + +1.2 858,063 + -0.9 858,064 - -0.1 858,086 + +1.1 858,086 + -0.7 858,086 + -1.6 858,090 - -0.1 858,090 - +3.9 858,115 - +0.4 858,158 - -0.2 858,158 - -1.0 858,190 - +0.6 858,229 - +0.2 858,250 + -0.1 858,278 + -2.0
Or see this region's nucleotide sequence