Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03150

Experiment: m.b. Fusidic 0.0005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03145 and CA264_03150 are separated by 328 nucleotidesCA264_03150 and CA264_03155 are separated by 244 nucleotides CA264_03145: CA264_03145 - cellulose synthase, at 733,925 to 735,706 _03145 CA264_03150: CA264_03150 - hypothetical protein, at 736,035 to 737,237 _03150 CA264_03155: CA264_03155 - hypothetical protein, at 737,482 to 738,237 _03155 Position (kb) 736 737 738Strain fitness (log2 ratio) -2 -1 0 1 2at 735.077 kb on - strand, within CA264_03145at 735.126 kb on + strand, within CA264_03145at 735.221 kb on + strand, within CA264_03145at 735.222 kb on - strand, within CA264_03145at 735.296 kb on + strand, within CA264_03145at 735.296 kb on + strand, within CA264_03145at 735.383 kb on - strand, within CA264_03145at 735.406 kb on - strand, within CA264_03145at 735.422 kb on + strand, within CA264_03145at 735.423 kb on - strand, within CA264_03145at 735.423 kb on - strand, within CA264_03145at 735.423 kb on - strand, within CA264_03145at 735.472 kb on - strand, within CA264_03145at 735.472 kb on - strand, within CA264_03145at 735.474 kb on + strand, within CA264_03145at 735.474 kb on + strand, within CA264_03145at 735.475 kb on - strand, within CA264_03145at 735.475 kb on - strand, within CA264_03145at 735.475 kb on - strand, within CA264_03145at 735.537 kb on + strandat 735.538 kb on - strandat 735.549 kb on + strandat 735.549 kb on + strandat 735.555 kb on - strandat 735.555 kb on - strandat 735.722 kb on + strandat 735.727 kb on + strandat 735.733 kb on - strandat 735.733 kb on - strandat 735.733 kb on - strandat 735.822 kb on - strandat 735.845 kb on + strandat 735.851 kb on + strandat 735.895 kb on + strandat 735.896 kb on - strandat 735.899 kb on + strandat 735.899 kb on + strandat 735.899 kb on + strandat 735.900 kb on - strandat 735.900 kb on - strandat 735.948 kb on - strandat 735.956 kb on - strandat 736.006 kb on - strandat 736.080 kb on + strandat 736.081 kb on - strandat 736.086 kb on - strandat 736.110 kb on + strandat 736.111 kb on - strandat 736.123 kb on + strandat 736.124 kb on - strandat 736.208 kb on + strand, within CA264_03150at 736.253 kb on + strand, within CA264_03150at 736.253 kb on + strand, within CA264_03150at 736.253 kb on + strand, within CA264_03150at 736.254 kb on - strand, within CA264_03150at 736.257 kb on + strand, within CA264_03150at 736.261 kb on - strand, within CA264_03150at 736.261 kb on - strand, within CA264_03150at 736.261 kb on - strand, within CA264_03150at 736.365 kb on + strand, within CA264_03150at 736.365 kb on + strand, within CA264_03150at 736.366 kb on - strand, within CA264_03150at 736.366 kb on - strand, within CA264_03150at 736.487 kb on - strand, within CA264_03150at 736.487 kb on - strand, within CA264_03150at 736.520 kb on + strand, within CA264_03150at 736.530 kb on - strand, within CA264_03150at 736.530 kb on - strand, within CA264_03150at 736.596 kb on + strand, within CA264_03150at 736.597 kb on - strand, within CA264_03150at 736.601 kb on + strand, within CA264_03150at 736.602 kb on - strand, within CA264_03150at 736.638 kb on + strand, within CA264_03150at 736.638 kb on + strand, within CA264_03150at 736.639 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.642 kb on - strand, within CA264_03150at 736.644 kb on - strand, within CA264_03150at 736.752 kb on + strand, within CA264_03150at 736.752 kb on + strand, within CA264_03150at 736.753 kb on - strand, within CA264_03150at 736.753 kb on - strand, within CA264_03150at 736.760 kb on + strand, within CA264_03150at 736.760 kb on + strand, within CA264_03150at 736.760 kb on + strand, within CA264_03150at 736.772 kb on + strand, within CA264_03150at 736.773 kb on - strand, within CA264_03150at 736.773 kb on - strand, within CA264_03150at 736.891 kb on - strand, within CA264_03150at 736.900 kb on - strand, within CA264_03150at 736.938 kb on + strand, within CA264_03150at 737.157 kb on + strandat 737.158 kb on - strandat 737.158 kb on - strandat 737.161 kb on + strandat 737.162 kb on - strandat 737.162 kb on - strandat 737.162 kb on - strandat 737.163 kb on + strandat 737.163 kb on + strandat 737.163 kb on + strandat 737.164 kb on - strandat 737.164 kb on - strandat 737.164 kb on - strandat 737.164 kb on - strandat 737.238 kb on + strandat 737.487 kb on + strandat 737.492 kb on + strandat 737.501 kb on + strandat 737.584 kb on - strand, within CA264_03155at 737.623 kb on - strand, within CA264_03155at 737.781 kb on + strand, within CA264_03155at 737.902 kb on + strand, within CA264_03155at 737.903 kb on - strand, within CA264_03155at 737.951 kb on + strand, within CA264_03155at 737.952 kb on - strand, within CA264_03155at 737.968 kb on - strand, within CA264_03155at 738.210 kb on + strandat 738.215 kb on + strandat 738.215 kb on + strandat 738.233 kb on + strandat 738.234 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0005 mg/ml
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735,077 - CA264_03145 0.65 -0.2
735,126 + CA264_03145 0.67 -0.7
735,221 + CA264_03145 0.73 +0.0
735,222 - CA264_03145 0.73 -0.2
735,296 + CA264_03145 0.77 -0.8
735,296 + CA264_03145 0.77 -1.7
735,383 - CA264_03145 0.82 -0.1
735,406 - CA264_03145 0.83 -0.9
735,422 + CA264_03145 0.84 +0.7
735,423 - CA264_03145 0.84 +1.7
735,423 - CA264_03145 0.84 -0.3
735,423 - CA264_03145 0.84 +0.0
735,472 - CA264_03145 0.87 -1.1
735,472 - CA264_03145 0.87 +0.7
735,474 + CA264_03145 0.87 +0.2
735,474 + CA264_03145 0.87 -1.0
735,475 - CA264_03145 0.87 +0.2
735,475 - CA264_03145 0.87 +0.1
735,475 - CA264_03145 0.87 -0.5
735,537 + +0.9
735,538 - -0.7
735,549 + +0.4
735,549 + -1.0
735,555 - +0.3
735,555 - -0.1
735,722 + +0.0
735,727 + +0.3
735,733 - -0.1
735,733 - -0.9
735,733 - +0.9
735,822 - -0.1
735,845 + -1.2
735,851 + -1.2
735,895 + +1.5
735,896 - -0.2
735,899 + -0.2
735,899 + +1.2
735,899 + -0.1
735,900 - -0.8
735,900 - -0.3
735,948 - +1.8
735,956 - -0.4
736,006 - -0.1
736,080 + -0.7
736,081 - -1.3
736,086 - +0.4
736,110 + -0.5
736,111 - -0.2
736,123 + +1.5
736,124 - -1.4
736,208 + CA264_03150 0.14 -0.1
736,253 + CA264_03150 0.18 -0.3
736,253 + CA264_03150 0.18 +0.3
736,253 + CA264_03150 0.18 -0.3
736,254 - CA264_03150 0.18 -0.3
736,257 + CA264_03150 0.18 -0.0
736,261 - CA264_03150 0.19 -0.1
736,261 - CA264_03150 0.19 -0.9
736,261 - CA264_03150 0.19 +0.0
736,365 + CA264_03150 0.27 +0.2
736,365 + CA264_03150 0.27 -0.6
736,366 - CA264_03150 0.28 +0.9
736,366 - CA264_03150 0.28 -1.1
736,487 - CA264_03150 0.38 -1.0
736,487 - CA264_03150 0.38 -0.2
736,520 + CA264_03150 0.40 +0.1
736,530 - CA264_03150 0.41 -0.4
736,530 - CA264_03150 0.41 -0.7
736,596 + CA264_03150 0.47 -0.4
736,597 - CA264_03150 0.47 -0.1
736,601 + CA264_03150 0.47 -1.1
736,602 - CA264_03150 0.47 +0.1
736,638 + CA264_03150 0.50 -2.6
736,638 + CA264_03150 0.50 +0.8
736,639 - CA264_03150 0.50 -1.1
736,642 - CA264_03150 0.50 -2.4
736,642 - CA264_03150 0.50 -0.2
736,642 - CA264_03150 0.50 -0.7
736,642 - CA264_03150 0.50 +0.5
736,642 - CA264_03150 0.50 -0.3
736,642 - CA264_03150 0.50 -1.0
736,644 - CA264_03150 0.51 -0.0
736,752 + CA264_03150 0.60 +0.0
736,752 + CA264_03150 0.60 -0.4
736,753 - CA264_03150 0.60 +0.0
736,753 - CA264_03150 0.60 -0.1
736,760 + CA264_03150 0.60 -0.5
736,760 + CA264_03150 0.60 -1.5
736,760 + CA264_03150 0.60 -0.6
736,772 + CA264_03150 0.61 -0.4
736,773 - CA264_03150 0.61 +1.2
736,773 - CA264_03150 0.61 +0.8
736,891 - CA264_03150 0.71 -0.6
736,900 - CA264_03150 0.72 -1.0
736,938 + CA264_03150 0.75 -0.1
737,157 + -0.7
737,158 - +0.2
737,158 - -0.3
737,161 + -0.4
737,162 - -0.3
737,162 - -0.1
737,162 - -0.4
737,163 + -0.3
737,163 + -0.1
737,163 + +0.1
737,164 - -0.1
737,164 - -0.4
737,164 - -1.4
737,164 - +0.8
737,238 + -0.6
737,487 + -0.3
737,492 + -0.2
737,501 + -0.2
737,584 - CA264_03155 0.13 -0.3
737,623 - CA264_03155 0.19 -0.4
737,781 + CA264_03155 0.40 +0.8
737,902 + CA264_03155 0.56 -0.4
737,903 - CA264_03155 0.56 +0.7
737,951 + CA264_03155 0.62 +0.3
737,952 - CA264_03155 0.62 -0.2
737,968 - CA264_03155 0.64 -0.0
738,210 + -0.8
738,215 + +0.3
738,215 + -0.2
738,233 + -0.7
738,234 - -0.2

Or see this region's nucleotide sequence