Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00010
Experiment: m.b. Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,437 | - | -1.9 | |||
1,496 | + | +0.2 | |||
1,551 | - | -0.1 | |||
1,634 | + | CA264_00010 | 0.28 | +0.3 | |
1,754 | + | CA264_00010 | 0.55 | +1.6 | |
1,755 | - | CA264_00010 | 0.56 | +0.0 | |
1,755 | - | CA264_00010 | 0.56 | -0.3 | |
1,766 | - | CA264_00010 | 0.58 | -0.1 | |
1,775 | + | CA264_00010 | 0.60 | +0.2 | |
1,776 | - | CA264_00010 | 0.61 | -0.5 | |
1,853 | + | CA264_00010 | 0.79 | +0.4 | |
1,854 | - | CA264_00010 | 0.79 | -0.5 | |
1,857 | - | CA264_00010 | 0.79 | -0.4 | |
1,857 | - | CA264_00010 | 0.79 | -0.4 | |
1,862 | + | CA264_00010 | 0.81 | -1.4 | |
1,874 | + | CA264_00010 | 0.83 | -0.1 | |
1,875 | - | CA264_00010 | 0.84 | +0.3 | |
1,902 | + | -0.2 | |||
1,903 | - | -0.4 | |||
1,903 | - | -0.1 | |||
1,947 | + | -0.2 | |||
1,979 | - | -0.9 | |||
1,991 | - | +0.2 | |||
2,007 | + | +0.8 | |||
2,008 | - | +1.2 | |||
2,008 | - | +0.0 | |||
2,028 | + | -0.1 | |||
2,028 | + | -0.0 | |||
2,029 | - | -0.6 | |||
2,078 | + | +0.8 | |||
2,079 | - | +0.3 | |||
2,080 | + | +1.7 | |||
2,081 | - | +0.8 | |||
2,081 | - | +1.5 | |||
2,108 | + | +0.6 | |||
2,189 | + | -0.3 | |||
2,193 | + | -0.3 | |||
2,194 | - | +0.6 | |||
2,230 | - | +0.3 | |||
2,230 | - | -0.1 | |||
2,230 | - | +2.4 | |||
2,242 | + | +0.8 | |||
2,243 | - | +0.8 | |||
2,300 | - | -0.1 | |||
2,300 | - | +0.7 | |||
2,319 | - | +0.6 | |||
2,363 | - | -0.1 | |||
2,395 | - | +0.0 | |||
2,462 | + | +0.0 | |||
2,677 | - | CA264_00015 | 0.21 | -0.7 | |
2,677 | - | CA264_00015 | 0.21 | -0.4 | |
2,677 | - | CA264_00015 | 0.21 | -0.4 | |
2,677 | - | CA264_00015 | 0.21 | -0.3 | |
2,699 | + | CA264_00015 | 0.23 | -0.2 | |
2,699 | + | CA264_00015 | 0.23 | -0.3 | |
2,742 | + | CA264_00015 | 0.26 | +0.6 | |
2,853 | - | CA264_00015 | 0.33 | -0.2 |
Or see this region's nucleotide sequence