Strain Fitness in Pseudomonas simiae WCS417 around PS417_27865
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,005,740 | + | +0.9 | |||
6,005,741 | - | -0.1 | |||
6,005,938 | + | -0.1 | |||
6,005,955 | + | -0.6 | |||
6,005,956 | - | -1.9 | |||
6,005,956 | - | +0.6 | |||
6,006,305 | + | PS417_27865 | 0.40 | +0.3 | |
6,006,305 | + | PS417_27865 | 0.40 | -1.8 | |
6,006,306 | - | PS417_27865 | 0.40 | -0.9 | |
6,006,306 | - | PS417_27865 | 0.40 | -1.1 | |
6,006,857 | + | +0.4 | |||
6,006,857 | + | -0.1 | |||
6,006,857 | + | -1.7 | |||
6,007,246 | + | PS417_27870 | 0.18 | -1.4 | |
6,007,247 | - | PS417_27870 | 0.18 | -1.8 |
Or see this region's nucleotide sequence