Strain Fitness in Pseudomonas simiae WCS417 around PS417_25405

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
5,502,427	+				-1.5
5,502,428	-				+0.0
5,502,428	-				+0.1
5,502,428	-				+0.1
5,502,428	-				+0.6
5,502,428	-				+0.6
5,502,470	+				-0.7
5,502,471	-				+0.4
5,502,621	-				-0.1
5,502,668	-				+0.1
5,502,670	+				-0.5
5,502,670	+				+0.5
5,502,670	+				+1.3
5,502,671	-				-0.3
5,502,671	-				+0.5
5,502,792	-				-1.6
5,502,899	+		PS417_25400	0.27	-0.8
5,502,899	+		PS417_25400	0.27	-0.5
5,502,900	-		PS417_25400	0.28	-1.9
5,502,900	-		PS417_25400	0.28	-0.9
5,502,900	-		PS417_25400	0.28	-0.1
5,502,900	-		PS417_25400	0.28	-0.2
5,502,956	+		PS417_25400	0.40	+0.0
5,502,956	+		PS417_25400	0.40	+0.1
5,502,957	-		PS417_25400	0.40	+0.1
5,502,957	-		PS417_25400	0.40	+0.1
5,502,957	-		PS417_25400	0.40	+0.1
5,502,957	-		PS417_25400	0.40	-0.8
5,502,992	-		PS417_25400	0.47	-0.3
5,503,107	+		PS417_25400	0.72	-0.4
5,503,142	+		PS417_25400	0.80	+0.2
5,503,216	+				-0.5
5,503,217	-				+1.0
5,503,242	+				-0.1
5,503,243	-				+0.5
5,503,243	-				+0.5
5,503,394	-				+0.1
5,503,394	-				+0.8
5,503,453	+				-0.1
5,503,579	+		PS417_25405	0.13	+0.1
5,503,580	-		PS417_25405	0.13	+0.1
5,503,580	-		PS417_25405	0.13	-0.3
5,503,583	-		PS417_25405	0.13	+0.3
5,503,607	-		PS417_25405	0.15	-0.1
5,503,678	+		PS417_25405	0.20	+0.6
5,503,678	+		PS417_25405	0.20	+0.5
5,503,679	-		PS417_25405	0.20	-0.7
5,503,693	+		PS417_25405	0.21	-0.3
5,503,694	-		PS417_25405	0.21	+0.6
5,503,747	+		PS417_25405	0.24	-1.0
5,503,747	+		PS417_25405	0.24	-1.0
5,503,747	+		PS417_25405	0.24	+1.1
5,503,764	-		PS417_25405	0.26	-0.2
5,503,853	+		PS417_25405	0.32	+0.3
5,503,854	-		PS417_25405	0.32	-0.7
5,503,854	-		PS417_25405	0.32	-0.5
5,503,854	-		PS417_25405	0.32	+0.3
5,503,854	-		PS417_25405	0.32	-0.9
5,503,872	+		PS417_25405	0.33	-0.2
5,503,873	-		PS417_25405	0.33	+0.5
5,503,928	-		PS417_25405	0.37	-1.6
5,503,946	+		PS417_25405	0.38	+0.1
5,504,204	+		PS417_25405	0.56	+0.2
5,504,240	+		PS417_25405	0.59	-0.2
5,504,242	+		PS417_25405	0.59	-0.1
5,504,242	+		PS417_25405	0.59	+0.0
5,504,242	+		PS417_25405	0.59	-0.0
5,504,243	-		PS417_25405	0.59	-0.7
5,504,243	-		PS417_25405	0.59	-1.1
5,504,243	-		PS417_25405	0.59	-0.7
5,504,289	-		PS417_25405	0.62	-0.3
5,504,492	-		PS417_25405	0.76	-1.3
5,504,528	+		PS417_25405	0.78	-0.2
5,504,620	+		PS417_25405	0.85	-0.3
5,504,621	-		PS417_25405	0.85	-0.5
5,504,621	-		PS417_25405	0.85	-0.9
5,504,657	-		PS417_25405	0.87	-0.2
5,504,817	-				-0.4
5,504,896	+				-0.4
5,504,897	-				+0.1
5,504,897	-				+0.6
5,504,897	-				+0.3
5,504,909	+				+0.6
5,504,918	+				+0.1
5,505,007	+				-0.2
5,505,008	-				+0.2
5,505,008	-				+0.5
5,505,022	+				-0.4
5,505,023	-				+0.4
5,505,026	-				+0.3