Strain Fitness in Pseudomonas simiae WCS417 around PS417_24800

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
5,376,272	-				+1.1
5,376,272	-				+1.7
5,376,272	-				+0.0
5,376,272	-				+0.0
5,376,274	+				+0.1
5,376,274	+				-0.1
5,376,274	+				-0.4
5,376,521	+		PS417_24790	0.66	-0.0
5,376,521	+		PS417_24790	0.66	+0.3
5,376,521	+		PS417_24790	0.66	+0.5
5,376,521	+		PS417_24790	0.66	-0.7
5,376,521	+		PS417_24790	0.66	+1.5
5,376,522	-		PS417_24790	0.66	-0.2
5,377,570	-		PS417_24800	0.25	-0.7
5,377,608	-		PS417_24800	0.27	-1.5
5,377,608	-		PS417_24800	0.27	-0.6
5,377,608	-		PS417_24800	0.27	-0.9
5,378,061	-		PS417_24800	0.61	-0.3
5,378,325	-		PS417_24800	0.81	+1.3
5,378,345	-		PS417_24800	0.82	-1.0
5,378,575	-				-2.3
5,378,587	-				-2.4
5,378,689	-				-0.2
5,378,689	-				-2.1
5,378,689	-				-0.5
5,379,093	-		PS417_24805	0.24	-0.2
5,379,095	+		PS417_24805	0.24	+0.6
5,379,096	-		PS417_24805	0.24	+0.1
5,379,096	-		PS417_24805	0.24	+0.3
5,379,115	-		PS417_24805	0.25	-1.2
5,379,159	+		PS417_24805	0.27	+0.6
5,379,166	+		PS417_24805	0.27	-0.2
5,379,167	-		PS417_24805	0.28	+0.0
5,379,226	+		PS417_24805	0.31	-2.0
5,379,227	-		PS417_24805	0.31	+0.0
5,379,571	-		PS417_24805	0.49	+0.3