Strain Fitness in Pseudomonas simiae WCS417 around PS417_22480

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,865,850	-				-0.5
4,865,850	-				+0.1
4,865,850	-				+0.1
4,865,855	-				-1.0
4,865,855	-				-1.4
4,865,855	-				+0.7
4,866,105	+				-1.0
4,866,105	+				-0.7
4,866,106	-				-1.1
4,866,106	-				+0.3
4,866,106	-				-0.3
4,866,111	+				-0.6
4,866,112	-				-0.3
4,866,112	-				+0.9
4,866,112	-				-1.3
4,866,112	-				+0.9
4,866,112	-				-0.7
4,866,112	-				-0.3
4,866,203	-				-0.0
4,866,203	-				-0.3
4,866,203	-				+0.2
4,866,205	-				+0.0
4,866,399	+		PS417_22475	0.33	+0.5
4,866,400	-		PS417_22475	0.33	+0.9
4,866,400	-		PS417_22475	0.33	+0.0
4,866,455	-		PS417_22475	0.50	-0.2
4,866,455	-		PS417_22475	0.50	-0.2
4,866,462	+		PS417_22475	0.52	+0.4
4,866,462	+		PS417_22475	0.52	+0.1
4,866,462	+		PS417_22475	0.52	+0.2
4,866,569	+		PS417_22475	0.84	-0.1
4,866,569	+		PS417_22475	0.84	+0.2
4,866,570	-		PS417_22475	0.84	+0.0
4,866,575	-		PS417_22475	0.86	-0.1
4,866,622	+				+0.3
4,866,622	+				+0.9
4,866,622	+				+0.3
4,866,622	+				+1.9
4,866,622	+				+0.7
4,866,622	+				+0.0
4,866,623	-				+0.2
4,866,623	-				-3.1
4,866,623	-				+0.3
4,866,623	-				-0.6
4,866,623	-				+0.1
4,866,623	-				-1.1
4,866,623	-				+0.7
4,866,623	-				+0.6
4,866,623	-				+0.7
4,866,734	+				-0.1
4,866,956	+		PS417_22480	0.32	-0.0
4,866,957	-		PS417_22480	0.32	+0.4
4,866,957	-		PS417_22480	0.32	-1.0
4,867,026	+		PS417_22480	0.47	+1.2
4,867,027	-		PS417_22480	0.47	-0.8
4,867,035	+		PS417_22480	0.49	-2.7
4,867,036	-		PS417_22480	0.49	+0.1
4,867,036	-		PS417_22480	0.49	+0.2
4,867,110	+		PS417_22480	0.65	+0.4
4,867,111	-		PS417_22480	0.65	-0.1
4,867,174	+		PS417_22480	0.78	-1.5
4,867,189	-		PS417_22480	0.81	-0.3
4,867,193	+		PS417_22480	0.82	+0.3
4,867,193	+		PS417_22480	0.82	+1.2
4,867,193	+		PS417_22480	0.82	+1.6
4,867,193	+		PS417_22480	0.82	+0.1
4,867,193	+		PS417_22480	0.82	+0.6
4,867,193	+		PS417_22480	0.82	+1.1
4,867,193	+		PS417_22480	0.82	+0.7
4,867,194	-		PS417_22480	0.82	+0.3
4,867,194	-		PS417_22480	0.82	-0.5
4,867,194	-		PS417_22480	0.82	-0.1
4,867,194	-		PS417_22480	0.82	+0.2
4,867,194	-		PS417_22480	0.82	-0.7
4,867,194	-		PS417_22480	0.82	+0.6
4,867,194	-		PS417_22480	0.82	-2.4
4,867,197	+		PS417_22480	0.83	+0.1
4,867,197	+		PS417_22480	0.83	+0.7
4,867,197	+		PS417_22480	0.83	-1.7
4,867,197	+		PS417_22480	0.83	+0.5
4,867,197	+		PS417_22480	0.83	+1.7
4,867,197	+		PS417_22480	0.83	-0.4
4,867,197	+		PS417_22480	0.83	+0.5
4,867,197	+		PS417_22480	0.83	-0.4
4,867,197	+		PS417_22480	0.83	+0.6
4,867,197	+		PS417_22480	0.83	+0.6
4,867,197	+		PS417_22480	0.83	+0.1
4,867,197	+		PS417_22480	0.83	+0.3
4,867,197	+		PS417_22480	0.83	-0.4
4,867,197	+		PS417_22480	0.83	+0.6
4,867,197	+		PS417_22480	0.83	+0.7
4,867,197	+				+0.3
4,867,197	+		PS417_22480	0.83	+0.8
4,867,197	+		PS417_22480	0.83	+0.5
4,867,197	+		PS417_22480	0.83	-0.3
4,867,198	-		PS417_22480	0.83	-0.2
4,867,198	-		PS417_22480	0.83	-2.4
4,867,198	-		PS417_22480	0.83	-0.3
4,867,198	-		PS417_22480	0.83	-0.3
4,867,198	-		PS417_22480	0.83	+0.6
4,867,198	-		PS417_22480	0.83	-0.3
4,867,198	-		PS417_22480	0.83	-1.1
4,867,280	+				+0.8
4,867,329	-				-0.5
4,867,674	+				+0.3