Strain Fitness in Pseudomonas simiae WCS417 around PS417_22200

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,808,312	-		PS417_22195	0.36	+1.0
4,808,513	+		PS417_22195	0.51	-0.4
4,808,646	-		PS417_22195	0.61	+0.1
4,808,822	+		PS417_22195	0.74	+0.3
4,809,017	+		PS417_22195	0.88	-1.1
4,809,188	+				+0.2
4,809,266	+				-0.7
4,809,305	+				+0.7
4,809,305	+				+0.1
4,809,329	+				-0.0
4,809,330	-				-0.6
4,809,330	-				+0.7
4,809,388	+				+0.3
4,809,426	+				-0.3
4,809,503	-				+0.5
4,809,700	-		PS417_22200	0.11	+0.0
4,809,727	+		PS417_22200	0.11	+0.3
4,809,727	+		PS417_22200	0.11	-0.4
4,809,728	-		PS417_22200	0.11	+0.3
4,809,728	-		PS417_22200	0.11	+0.4
4,809,728	-		PS417_22200	0.11	-1.7
4,809,883	+				-0.7
4,809,883	+		PS417_22200	0.15	-1.2
4,809,883	+		PS417_22200	0.15	-0.2
4,809,884	-		PS417_22200	0.15	-0.1
4,809,884	-		PS417_22200	0.15	+0.8
4,809,884	-		PS417_22200	0.15	+0.6
4,809,884	-		PS417_22200	0.15	+0.9
4,809,884	-		PS417_22200	0.15	-0.2
4,809,884	-		PS417_22200	0.15	-3.0
4,809,973	+				-0.2
4,809,974	-		PS417_22200	0.17	-0.2
4,809,974	-		PS417_22200	0.17	+0.3
4,809,974	-		PS417_22200	0.17	-0.4
4,810,012	+		PS417_22200	0.18	-0.4
4,810,013	-		PS417_22200	0.18	+0.2
4,810,044	+		PS417_22200	0.19	-0.1
4,810,045	-		PS417_22200	0.19	-0.9
4,810,045	-		PS417_22200	0.19	+0.0
4,810,108	+		PS417_22200	0.20	-0.1
4,810,108	+		PS417_22200	0.20	-1.0
4,810,108	+				-0.7
4,810,108	+		PS417_22200	0.20	-0.1
4,810,109	-		PS417_22200	0.20	-0.0
4,810,109	-		PS417_22200	0.20	+0.0
4,810,581	+		PS417_22200	0.32	-1.3
4,810,582	-		PS417_22200	0.32	+0.7
4,810,622	-		PS417_22200	0.33	-0.1
4,810,627	+		PS417_22200	0.33	-0.7
4,810,628	-		PS417_22200	0.33	+1.4
4,810,720	+		PS417_22200	0.35	+0.8
4,810,721	-		PS417_22200	0.35	+0.0
4,810,721	-		PS417_22200	0.35	+0.2
4,810,756	+		PS417_22200	0.36	-0.1
4,810,924	+		PS417_22200	0.40	-0.1
4,811,153	-		PS417_22200	0.45	-0.1
4,811,272	+		PS417_22200	0.48	-0.1
4,811,365	+		PS417_22200	0.50	+1.2
4,811,366	-		PS417_22200	0.50	+0.6
4,811,620	+		PS417_22200	0.56	+1.4
4,811,621	-		PS417_22200	0.56	-0.1
4,811,981	+		PS417_22200	0.65	-0.2
4,811,982	-		PS417_22200	0.65	+0.1
4,812,430	+		PS417_22200	0.75	-0.6
4,812,431	-		PS417_22200	0.75	+0.2
4,812,615	+		PS417_22200	0.80	+0.4
4,812,771	+		PS417_22200	0.83	+0.6
4,812,779	-		PS417_22200	0.84	+0.2
4,813,007	-		PS417_22200	0.89	+0.1
4,813,491	-				+2.8
4,813,530	+				+0.2
4,813,530	+				+0.4
4,813,535	-				-0.6
4,813,535	-				+0.4
4,813,566	+				-0.2
4,813,566	+				-0.1
4,813,567	-				-0.5
4,813,642	+				-0.2
4,813,643	-				+0.4
4,813,841	+		PS417_22205	0.15	-0.0
4,813,841	+		PS417_22205	0.15	-0.6
4,813,841	+		PS417_22205	0.15	+0.5
4,813,842	-		PS417_22205	0.15	-0.2
4,813,876	+		PS417_22205	0.17	-0.5
4,813,877	-		PS417_22205	0.18	-0.5
4,813,877	-		PS417_22205	0.18	-0.8
4,813,919	+		PS417_22205	0.20	-0.1
4,813,919	+		PS417_22205	0.20	-0.6
4,813,920	-		PS417_22205	0.20	-0.5
4,813,969	+		PS417_22205	0.24	-0.9
4,814,387	+		PS417_22205	0.53	-1.0
4,814,388	-		PS417_22205	0.53	-0.0