Strain Fitness in Pseudomonas simiae WCS417 around PS417_19540

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
4,236,089	+		PS417_19535	0.37	+0.3
4,236,089	+		PS417_19535	0.37	+0.3
4,236,090	-		PS417_19535	0.37	-0.7
4,236,090	-		PS417_19535	0.37	-0.1
4,236,090	-		PS417_19535	0.37	-2.0
4,236,485	+		PS417_19535	0.89	+0.7
4,236,485	+		PS417_19535	0.89	-0.5
4,236,567	-				-0.2
4,236,581	+				-0.6
4,236,582	-				+1.2
4,236,784	+				+0.3
4,236,787	+				+0.2
4,236,787	+				-1.8
4,236,787	+				+1.3
4,236,788	-				+0.2
4,236,808	-				+0.2
4,236,878	+				-0.2
4,236,878	+				-0.0
4,236,948	+		PS417_19540	0.11	-0.5
4,236,949	-		PS417_19540	0.11	-0.0
4,236,949	-		PS417_19540	0.11	-0.7
4,236,949	-		PS417_19540	0.11	+0.3
4,236,955	-		PS417_19540	0.12	+0.0
4,236,955	-		PS417_19540	0.12	+0.1
4,236,957	-		PS417_19540	0.12	-0.5
4,237,016	-		PS417_19540	0.14	-0.0
4,237,087	-				+0.5
4,237,162	-		PS417_19540	0.19	-0.2
4,237,211	+		PS417_19540	0.21	-0.2
4,237,212	-		PS417_19540	0.21	+0.0
4,237,291	+		PS417_19540	0.24	+0.1
4,237,527	+		PS417_19540	0.33	-0.6
4,237,528	-		PS417_19540	0.33	+0.1
4,237,548	-		PS417_19540	0.33	-1.0
4,237,729	+		PS417_19540	0.40	+0.1
4,237,729	+		PS417_19540	0.40	+0.4
4,237,730	-		PS417_19540	0.40	+1.2
4,237,730	-		PS417_19540	0.40	-0.0
4,237,736	+		PS417_19540	0.40	-1.1
4,237,791	+		PS417_19540	0.42	-0.0
4,237,791	+		PS417_19540	0.42	-0.1
4,237,791	+		PS417_19540	0.42	-0.5
4,237,791	+		PS417_19540	0.42	-0.5
4,237,791	+		PS417_19540	0.42	+0.3
4,237,792	-		PS417_19540	0.42	-0.6
4,237,792	-		PS417_19540	0.42	+2.5
4,237,942	-		PS417_19540	0.48	+0.2
4,238,027	+		PS417_19540	0.51	+0.2
4,238,027	+		PS417_19540	0.51	+0.3
4,238,091	+		PS417_19540	0.54	-0.5
4,238,113	+		PS417_19540	0.54	-0.0
4,238,113	+		PS417_19540	0.54	-0.5
4,238,115	+		PS417_19540	0.54	-1.1
4,238,115	+		PS417_19540	0.54	-0.9
4,238,115	+		PS417_19540	0.54	+0.2
4,238,116	-		PS417_19540	0.54	+0.9
4,238,116	-		PS417_19540	0.54	-0.2
4,238,137	-		PS417_19540	0.55	-0.3
4,238,203	+		PS417_19540	0.58	-0.0
4,238,275	-		PS417_19540	0.60	+0.2
4,238,312	+		PS417_19540	0.62	-1.8
4,238,390	+		PS417_19540	0.65	-0.5
4,238,391	-		PS417_19540	0.65	+0.1
4,238,394	+		PS417_19540	0.65	-1.1
4,238,395	-		PS417_19540	0.65	+0.4
4,238,395	-		PS417_19540	0.65	-0.4
4,238,407	+		PS417_19540	0.65	-3.4
4,238,407	+		PS417_19540	0.65	+0.1
4,238,407	+		PS417_19540	0.65	-0.7
4,238,407	+		PS417_19540	0.65	+0.2
4,238,407	+		PS417_19540	0.65	-0.3
4,238,407	+		PS417_19540	0.65	-0.1
4,238,407	+		PS417_19540	0.65	-0.3
4,238,407	+		PS417_19540	0.65	-0.6
4,238,407	+		PS417_19540	0.65	-1.0
4,238,408	-		PS417_19540	0.65	-0.2
4,238,408	-		PS417_19540	0.65	+0.5
4,238,408	-		PS417_19540	0.65	+0.1
4,238,408	-		PS417_19540	0.65	+0.5
4,238,413	+		PS417_19540	0.65	-0.4
4,238,413	+		PS417_19540	0.65	+0.0
4,238,414	-		PS417_19540	0.65	-0.4
4,238,414	-		PS417_19540	0.65	-0.3
4,238,414	-		PS417_19540	0.65	+0.1
4,238,465	+		PS417_19540	0.67	+1.5
4,238,497	+		PS417_19540	0.68	-0.7
4,238,498	-		PS417_19540	0.69	+0.5
4,238,498	-		PS417_19540	0.69	-0.1
4,238,521	+		PS417_19540	0.69	-0.6
4,238,522	-		PS417_19540	0.69	-0.8
4,238,704	+		PS417_19540	0.76	-0.4
4,238,705	-		PS417_19540	0.76	+0.1
4,238,739	+		PS417_19540	0.77	+0.8
4,238,739	+		PS417_19540	0.77	-0.2
4,238,740	-		PS417_19540	0.77	-0.0
4,238,741	+				+1.5
4,238,742	-		PS417_19540	0.78	-0.1
4,238,748	-		PS417_19540	0.78	+0.1
4,238,804	+		PS417_19540	0.80	+0.5
4,238,882	+				+1.5
4,238,882	+		PS417_19540	0.83	-0.4
4,238,882	+		PS417_19540	0.83	-1.8
4,238,883	-		PS417_19540	0.83	-0.5
4,238,883	-		PS417_19540	0.83	-0.0
4,238,887	-		PS417_19540	0.83	+0.4
4,238,895	+		PS417_19540	0.83	+0.8
4,238,917	+		PS417_19540	0.84	-1.8
4,238,917	+		PS417_19540	0.84	-0.1
4,238,918	-		PS417_19540	0.84	-1.5
4,238,918	-		PS417_19540	0.84	+0.2
4,238,921	+		PS417_19540	0.84	-0.4
4,238,921	+		PS417_19540	0.84	-1.8
4,238,922	-		PS417_19540	0.84	+0.1
4,238,922	-		PS417_19540	0.84	-0.1
4,238,954	+		PS417_19540	0.85	-0.6
4,238,954	+		PS417_19540	0.85	-0.2
4,239,057	-		PS417_19540	0.89	-1.0
4,239,073	+		PS417_19540	0.90	-0.8
4,239,121	+				+0.0
4,239,122	-				-0.1
4,239,231	+				+0.1
4,239,250	+				+0.3
4,239,476	-				-0.0
4,239,543	+				-2.0
4,239,543	+				+1.0
4,239,544	-				+0.1
4,239,586	+				-0.1
4,239,587	-				-1.7
4,239,587	-				-0.5
4,239,773	+				+0.3
4,239,916	+				+0.1
4,239,916	+				+0.4
4,239,916	+				-0.5
4,240,147	+				+0.0
4,240,148	-				-0.2
4,240,351	+				-0.1