Strain Fitness in Pseudomonas simiae WCS417 around PS417_14480

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
3,161,991	+		PS417_14475	0.63	+0.3
3,162,172	+		PS417_14475	0.82	+0.2
3,162,172	+		PS417_14475	0.82	+0.1
3,162,173	-		PS417_14475	0.82	+0.6
3,162,173	-		PS417_14475	0.82	-0.2
3,162,174	+		PS417_14475	0.82	+0.6
3,162,174	+		PS417_14475	0.82	-1.3
3,162,518	+				-0.6
3,162,577	-				+0.3
3,162,577	-				+0.2
3,162,577	-				+0.8
3,162,655	-				+0.5
3,162,655	-				+0.0
3,162,672	-				+0.9
3,162,845	+				-1.6
3,162,845	+				-0.2
3,162,846	-				-1.3
3,162,846	-				-0.1
3,162,862	+				-0.2
3,162,867	-				+0.3
3,163,003	+		PS417_14480	0.10	+0.3
3,163,124	+		PS417_14480	0.18	+0.2
3,163,125	-		PS417_14480	0.18	+0.2
3,163,206	+		PS417_14480	0.23	-0.0
3,163,207	-		PS417_14480	0.23	+0.2
3,163,207	-		PS417_14480	0.23	+0.1
3,163,207	-		PS417_14480	0.23	-0.3
3,163,210	+		PS417_14480	0.23	-0.1
3,163,211	-		PS417_14480	0.23	+0.1
3,163,408	-		PS417_14480	0.36	-0.3
3,163,409	+		PS417_14480	0.36	-0.1
3,163,410	-		PS417_14480	0.36	-0.3
3,163,410	-		PS417_14480	0.36	+0.6
3,163,464	+		PS417_14480	0.40	+0.2
3,163,465	-				+0.2
3,163,560	+		PS417_14480	0.46	-0.1
3,163,615	-		PS417_14480	0.49	-2.8
3,163,914	-		PS417_14480	0.69	-0.3
3,163,914	-		PS417_14480	0.69	-0.1
3,164,091	+				+0.2
3,164,119	-		PS417_14480	0.82	+0.2
3,164,344	-				+0.6
3,164,344	-				+0.7
3,164,397	+				+0.6
3,164,415	+				-1.1
3,164,417	+				+0.5
3,164,417	+				+0.2
3,164,417	+				+0.2
3,164,417	+				+2.2
3,164,418	-				-0.0
3,164,418	-				-0.3
3,164,418	-				+0.2
3,164,418	-				-0.5
3,164,513	+				+0.3
3,164,514	-				-0.1
3,164,514	-				-0.2
3,164,589	+				+1.3
3,164,590	-				+1.2
3,164,643	+		PS417_14485	0.13	+0.4
3,164,680	-		PS417_14485	0.15	-0.2
3,164,769	-		PS417_14485	0.20	+0.5
3,165,041	+		PS417_14485	0.36	-0.6
3,165,041	+		PS417_14485	0.36	+0.6
3,165,304	+		PS417_14485	0.51	-0.1
3,165,304	+		PS417_14485	0.51	+0.2
3,165,304	+		PS417_14485	0.51	-1.2
3,165,361	+		PS417_14485	0.54	-0.2
3,165,375	+		PS417_14485	0.55	+0.7
3,165,376	-		PS417_14485	0.55	+0.4