Strain Fitness in Pseudomonas simiae WCS417 around PS417_13255
Experiment: Tetracycline 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,898,971 | - | +0.8 | |||
2,898,971 | - | PS417_13250 | 0.65 | +0.3 | |
2,898,971 | - | PS417_13250 | 0.65 | -2.2 | |
2,899,370 | + | PS417_13250 | 0.88 | -1.6 | |
2,899,371 | - | PS417_13250 | 0.88 | -0.4 | |
2,899,561 | + | +0.3 | |||
2,899,562 | - | -1.0 | |||
2,899,562 | - | -0.5 | |||
2,899,562 | - | +0.9 | |||
2,900,801 | - | PS417_13255 | 0.70 | -0.7 | |
2,900,801 | - | PS417_13255 | 0.70 | -1.2 | |
2,901,508 | - | +0.3 | |||
2,901,639 | + | +0.2 | |||
2,901,871 | - | PS417_13260 | 0.10 | +0.4 | |
2,902,095 | + | PS417_13260 | 0.14 | -0.5 |
Or see this region's nucleotide sequence