Strain Fitness in Pseudomonas simiae WCS417 around PS417_09000

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,960,118	+				+0.1
1,960,118	+				+0.1
1,960,118	+				+0.2
1,960,122	+				-0.1
1,960,122	+				+0.4
1,960,122	+				-0.5
1,960,125	-				-0.6
1,960,125	-				+0.2
1,960,610	+				-1.5
1,960,611	-				-0.2
1,960,883	+				+0.3
1,960,883	+				-0.2
1,960,883	+				-0.6
1,960,901	+				-0.8
1,960,901	+				-0.1
1,960,905	+				-0.2
1,960,924	+				+0.2
1,961,041	-				-0.7
1,961,082	+				+0.4
1,961,082	+				-0.3
1,962,146	+				-0.4
1,962,147	-				+0.3
1,962,249	-		PS417_09005	0.37	+0.9
1,962,614	-		PS417_09010	0.34	+0.5
1,962,656	+		PS417_09010	0.43	-0.3
1,962,656	+		PS417_09010	0.43	-0.6
1,962,657	-		PS417_09010	0.43	+0.4
1,962,937	+				+0.1
1,962,937	+				+0.3
1,962,937	+				+0.5
1,962,937	+				-0.2
1,962,937	+				+0.7
1,962,938	-				-0.3
1,962,938	-				-0.7
1,962,938	-				+0.2
1,962,938	-				+0.2
1,962,939	+				-0.8
1,962,939	+				+2.1
1,962,940	-				-0.3
1,962,940	-				-0.1
1,962,940	-				+0.4
1,962,940	-				+0.5
1,963,108	+				-0.4