Strain Fitness in Pseudomonas simiae WCS417 around PS417_08840

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,921,508	+				+0.0
1,921,584	+				+0.9
1,921,584	+				+0.1
1,921,584	+				+1.1
1,921,584	+				-0.2
1,921,585	-				+0.0
1,921,590	+				-0.9
1,921,964	-		PS417_08835	0.52	-0.2
1,922,055	+		PS417_08835	0.64	-0.2
1,922,055	+		PS417_08835	0.64	-0.2
1,922,056	-		PS417_08835	0.64	+0.4
1,922,056	-		PS417_08835	0.64	+1.3
1,922,103	+		PS417_08835	0.70	-0.6
1,922,103	+		PS417_08835	0.70	-0.5
1,922,116	-		PS417_08835	0.72	-0.3
1,922,149	-		PS417_08835	0.76	+0.3
1,922,149	-		PS417_08835	0.76	+0.6
1,922,149	-		PS417_08835	0.76	+0.1
1,922,149	-		PS417_08835	0.76	-0.6
1,922,332	+				+0.2
1,922,617	+		PS417_08840	0.22	-1.1
1,922,618	-		PS417_08840	0.22	-0.3
1,922,618	-		PS417_08840	0.22	+0.1
1,922,827	+		PS417_08840	0.38	+0.2
1,922,854	+		PS417_08840	0.40	-0.2
1,922,902	+		PS417_08840	0.44	-0.3
1,922,975	-		PS417_08840	0.50	-1.3
1,923,091	+		PS417_08840	0.59	-1.3
1,923,092	-		PS417_08840	0.59	-0.3
1,923,148	+		PS417_08840	0.63	-1.3
1,923,149	-		PS417_08840	0.63	+0.5
1,923,263	-		PS417_08840	0.72	-0.4
1,923,266	-		PS417_08840	0.72	-0.4
1,923,280	+		PS417_08840	0.73	-0.2
1,923,281	-		PS417_08840	0.73	-0.3
1,923,281	-		PS417_08840	0.73	-0.2
1,923,440	-		PS417_08840	0.85	+0.4
1,923,541	+				-1.1
1,923,541	+				-0.7
1,923,541	+				+0.3
1,923,634	+				-0.4
1,923,635	-				+0.1
1,923,653	+				+0.2
1,923,653	+				-0.4
1,923,654	-				+0.7
1,923,657	+				-0.3
1,923,658	-				-0.1
1,923,658	-				-0.6
1,923,658	-				-0.3
1,923,674	+				-0.8
1,923,674	+				+0.9
1,923,674	+				-1.8
1,923,747	+				+0.2
1,923,747	+				-0.2
1,923,747	+				-0.6
1,923,748	-				-0.9
1,923,748	-				-0.5
1,923,748	-				-0.6
1,923,748	-				-0.6
1,923,775	+				+2.3
1,923,776	-				-0.2
1,923,776	-				-0.1
1,923,776	-				-0.2
1,923,776	-				+0.1
1,923,777	+				-0.6
1,923,777	+				-1.1
1,923,777	+				-0.6
1,923,778	-				-0.3
1,923,781	+				-0.1
1,923,798	+				-1.5
1,923,798	+				-0.1
1,923,799	-				+0.5
1,923,888	-				+0.3
1,923,897	+				+0.2
1,923,898	-				-0.8
1,923,898	-				-1.2
1,923,928	+		PS417_08845	0.17	-0.7
1,924,159	+		PS417_08845	0.80	-0.4
1,924,159	+		PS417_08845	0.80	-0.1
1,924,159	+		PS417_08845	0.80	+0.7
1,924,160	-		PS417_08845	0.80	-0.2
1,924,234	+				-0.0
1,924,300	+				-0.0
1,924,300	+				+0.3
1,924,400	-				-0.3
1,924,431	-				-1.0