Strain Fitness in Pseudomonas simiae WCS417 around PS417_07085

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,567,344	+		PS417_07080	0.45	-0.1
1,567,344	+		PS417_07080	0.45	-1.2
1,567,458	+		PS417_07080	0.54	+1.1
1,567,458	+		PS417_07080	0.54	+0.1
1,567,508	+		PS417_07080	0.58	+0.0
1,567,509	-		PS417_07080	0.58	-0.4
1,567,893	+		PS417_07080	0.88	+0.4
1,567,893	+		PS417_07080	0.88	-0.6
1,567,893	+		PS417_07080	0.88	-0.8
1,567,921	+				+0.8
1,568,058	+				-1.4
1,568,059	-				+0.3
1,568,076	-				-0.2
1,568,076	-				-0.6
1,568,076	-				-0.2
1,568,076	-				+0.2
1,568,076	-				+0.8
1,568,137	+				+0.3
1,568,137	+				-0.3
1,568,138	-				+0.9
1,568,138	-				-0.1
1,568,138	-				+1.3
1,568,138	-				-0.0
1,568,147	+				-0.7
1,568,147	+				+0.6
1,568,148	-				-0.8
1,568,277	-				-0.2
1,568,684	+		PS417_07085	0.59	-1.6
1,568,685	-		PS417_07085	0.60	-1.4
1,568,861	+				+1.2
1,568,862	-		PS417_07085	0.86	-1.0
1,568,862	-		PS417_07085	0.86	+0.0
1,568,930	+				+0.2
1,568,954	+				+0.0
1,568,954	+				+0.2
1,568,954	+				+0.3
1,568,955	-				+0.1
1,568,955	-				-0.0
1,569,040	-				-0.1
1,569,073	-				-0.1
1,569,157	-		PS417_07090	0.15	+0.5
1,569,157	-		PS417_07090	0.15	+0.2
1,569,157	-		PS417_07090	0.15	+0.2
1,569,171	-		PS417_07090	0.16	-0.1
1,569,181	-		PS417_07090	0.17	-0.3
1,569,201	+		PS417_07090	0.18	-0.0
1,569,201	+		PS417_07090	0.18	+0.1
1,569,201	+		PS417_07090	0.18	-0.3
1,569,202	-		PS417_07090	0.18	-0.9
1,569,202	-		PS417_07090	0.18	-0.2
1,569,312	+		PS417_07090	0.26	-0.5
1,569,324	+		PS417_07090	0.27	+0.8
1,569,324	+		PS417_07090	0.27	+0.4
1,569,324	+		PS417_07090	0.27	-0.2
1,569,324	+		PS417_07090	0.27	+0.5
1,569,325	-		PS417_07090	0.27	-0.5
1,569,325	-		PS417_07090	0.27	-0.2
1,569,325	-		PS417_07090	0.27	-0.1
1,569,325	-		PS417_07090	0.27	-0.1
1,569,381	-		PS417_07090	0.31	-0.3
1,569,559	+		PS417_07090	0.44	-0.1