Strain Fitness in Pseudomonas simiae WCS417 around PS417_05690

Experiment: Tetracycline 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.001 mg/ml
1,279,062	-		PS417_05680	0.87	-0.8
1,279,168	+				+0.3
1,279,169	-				+1.2
1,279,283	-				+0.5
1,279,294	+				+0.6
1,279,313	-				-0.7
1,279,354	+				+0.2
1,279,401	-				-0.1
1,279,487	+				+0.7
1,279,529	-				+0.3
1,279,529	-				+0.1
1,279,567	+				+0.1
1,279,567	+				+0.5
1,279,567	+				+0.8
1,279,568	-				+0.2
1,279,568	-				-0.6
1,279,578	-				+0.2
1,279,659	+		PS417_05685	0.22	-0.0
1,279,660	-		PS417_05685	0.23	-0.2
1,279,665	+		PS417_05685	0.24	+0.3
1,279,666	-		PS417_05685	0.24	+0.2
1,279,706	+		PS417_05685	0.35	+0.6
1,279,706	+		PS417_05685	0.35	+0.4
1,279,707	-		PS417_05685	0.35	+0.2
1,279,735	+		PS417_05685	0.43	+0.3
1,279,736	-		PS417_05685	0.43	-0.4
1,279,736	-		PS417_05685	0.43	+0.3
1,279,791	-				-1.1
1,280,083	-		PS417_05690	0.29	-1.0
1,280,087	-		PS417_05690	0.30	+1.6
1,280,087	-		PS417_05690	0.30	-0.3
1,280,118	+		PS417_05690	0.36	-1.4
1,280,118	+		PS417_05690	0.36	+0.9
1,280,119	-		PS417_05690	0.37	+0.4
1,280,119	-		PS417_05690	0.37	-0.7
1,280,119	-		PS417_05690	0.37	+0.1
1,280,119	-		PS417_05690	0.37	+0.9
1,280,119	-		PS417_05690	0.37	-0.7
1,280,119	-		PS417_05690	0.37	-0.2
1,280,177	-		PS417_05690	0.48	+0.5
1,280,325	+		PS417_05690	0.79	-0.9
1,280,326	-		PS417_05690	0.79	-0.7
1,280,411	+				-0.4
1,280,411	+				+0.0
1,280,421	+				+1.0
1,280,421	+				+1.1
1,280,422	-				+0.3
1,280,451	+				-0.0
1,280,452	-				-2.1
1,280,459	+				-2.1
1,280,460	-				-0.0
1,280,471	+				+1.5
1,280,471	+				-0.4
1,280,471	+				-0.3
1,280,472	-				+0.2
1,280,472	-				-0.0
1,280,472	-				+0.0
1,280,472	-				+0.5
1,280,472	-				+1.2
1,280,473	+				+0.1
1,280,473	+				-0.0
1,280,474	-				+0.3
1,280,475	+				+0.5
1,280,475	+				+0.2
1,280,475	+				+0.1
1,280,476	-				-0.1
1,280,476	-				-0.5
1,280,571	+				+0.0
1,280,571	+				+0.3
1,280,571	+				+0.2
1,280,571	+				+0.9
1,280,572	-				-0.8
1,280,572	-				+0.1
1,280,572	-				+0.0
1,280,640	+				+0.0
1,280,640	+				-0.1
1,280,717	-				-1.9
1,280,724	+				-1.8
1,280,845	+		PS417_05695	0.21	-0.1
1,280,846	-		PS417_05695	0.21	-1.0
1,280,961	+		PS417_05695	0.37	+0.1
1,280,961	+		PS417_05695	0.37	-1.6
1,280,962	-		PS417_05695	0.37	-2.3
1,281,248	+		PS417_05695	0.75	-1.7
1,281,248	+		PS417_05695	0.75	-2.2
1,281,248	+		PS417_05695	0.75	-1.8
1,281,249	-		PS417_05695	0.76	-0.8
1,281,353	+		PS417_05695	0.90	-1.6
1,281,353	+		PS417_05695	0.90	-0.3
1,281,354	-		PS417_05695	0.90	-1.3
1,281,354	-		PS417_05695	0.90	-0.7
1,281,355	+		PS417_05695	0.90	-1.7
1,281,356	-				-2.0
1,281,356	-				-0.7
1,281,356	-				-1.0
1,281,356	-				-1.8
1,281,356	-				-0.7
1,281,420	-				-1.3