Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3512

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
4,161,511	+				+2.3
4,161,512	-				-2.6
4,161,513	+				+0.7
4,161,514	-				-0.5
4,161,514	-				-1.9
4,161,531	+				+1.9
4,161,545	+				-0.7
4,161,545	+				-0.4
4,161,580	-				+0.2
4,161,597	+				-1.3
4,161,597	+				-1.4
4,161,615	-				-1.2
4,161,625	-				+0.1
4,161,628	+				-0.2
4,161,635	+				-0.2
4,161,647	-		Echvi_3511	0.11	-0.3
4,161,655	+		Echvi_3511	0.12	-1.3
4,161,656	-		Echvi_3511	0.12	+0.8
4,161,656	-		Echvi_3511	0.12	+0.3
4,161,659	+		Echvi_3511	0.13	-0.5
4,161,696	-		Echvi_3511	0.17	-1.0
4,161,701	-		Echvi_3511	0.17	-0.0
4,161,744	-		Echvi_3511	0.22	-0.2
4,161,744	-		Echvi_3511	0.22	-1.2
4,161,745	+		Echvi_3511	0.23	-0.5
4,161,745	+		Echvi_3511	0.23	-1.2
4,161,745	+		Echvi_3511	0.23	-0.9
4,161,745	+		Echvi_3511	0.23	-0.6
4,161,746	-		Echvi_3511	0.23	-0.8
4,161,746	-		Echvi_3511	0.23	-0.4
4,161,746	-		Echvi_3511	0.23	-0.3
4,161,746	-		Echvi_3511	0.23	-1.1
4,161,751	+		Echvi_3511	0.23	+0.6
4,161,887	-		Echvi_3511	0.39	+0.5
4,161,887	-		Echvi_3511	0.39	+0.6
4,161,887	-		Echvi_3511	0.39	+0.2
4,161,888	+		Echvi_3511	0.39	+1.6
4,161,888	+		Echvi_3511	0.39	+0.6
4,161,888	+		Echvi_3511	0.39	+0.1
4,161,888	+		Echvi_3511	0.39	-0.0
4,161,889	-		Echvi_3511	0.39	-1.1
4,161,889	-		Echvi_3511	0.39	+1.3
4,161,889	-		Echvi_3511	0.39	-1.4
4,161,889	-		Echvi_3511	0.39	-0.8
4,161,889	-		Echvi_3511	0.39	-1.0
4,161,919	+		Echvi_3511	0.43	-0.3
4,162,009	+		Echvi_3511	0.53	-0.4
4,162,094	+		Echvi_3511	0.63	-0.8
4,162,181	-		Echvi_3511	0.73	-1.2
4,162,181	-		Echvi_3511	0.73	+1.8
4,162,212	-		Echvi_3511	0.77	-0.5
4,162,235	+		Echvi_3511	0.80	-0.4
4,162,235	+		Echvi_3511	0.80	+0.3
4,162,235	+		Echvi_3511	0.80	-0.0
4,162,236	-		Echvi_3511	0.80	+0.8
4,162,236	-		Echvi_3511	0.80	+2.1
4,162,236	-		Echvi_3511	0.80	-0.7
4,162,236	-		Echvi_3511	0.80	+1.5
4,162,236	-		Echvi_3511	0.80	-0.1
4,162,236	-		Echvi_3511	0.80	+0.9
4,162,243	+		Echvi_3511	0.81	-0.2
4,162,244	-		Echvi_3511	0.81	-0.8
4,162,313	+		Echvi_3511	0.89	-0.5
4,162,333	+				+1.3
4,162,333	+				-0.1
4,162,334	-				+0.7
4,162,334	-				-0.8
4,162,340	+				-1.3
4,162,358	+				+0.4
4,162,359	-				-0.1
4,162,359	-				-0.5
4,162,361	-				+0.0
4,162,401	+				-1.6
4,162,401	+				+1.3
4,162,401	+				-0.9
4,162,402	-				-0.1
4,162,402	-				+2.1
4,162,402	-				+2.6
4,162,467	+				-0.9
4,162,520	+				-0.7
4,162,553	+		Echvi_3512	0.17	-1.5
4,162,582	+		Echvi_3512	0.27	+0.1
4,162,600	-		Echvi_3512	0.34	-0.4
4,162,730	+		Echvi_3512	0.80	+0.1
4,162,873	+				-0.8
4,162,874	-				+0.3
4,162,874	-				-1.1
4,162,877	+				+0.8
4,162,878	-				+0.2
4,162,878	-				+0.5
4,162,878	-				-0.6
4,162,917	-				-0.3
4,162,917	-				-0.1
4,162,986	-		Echvi_3513	0.14	-0.5
4,162,992	+		Echvi_3513	0.14	+2.2
4,162,992	+		Echvi_3513	0.14	+0.2
4,162,992	+		Echvi_3513	0.14	-1.6
4,162,993	-		Echvi_3513	0.14	-0.9
4,162,993	-		Echvi_3513	0.14	+2.1
4,162,996	+		Echvi_3513	0.15	-2.2
4,162,996	+		Echvi_3513	0.15	+0.7
4,162,996	+		Echvi_3513	0.15	-1.7
4,162,996	+		Echvi_3513	0.15	-1.3
4,162,997	-		Echvi_3513	0.15	-0.3
4,162,997	-		Echvi_3513	0.15	+1.2
4,162,997	-		Echvi_3513	0.15	+0.6
4,162,997	-		Echvi_3513	0.15	+0.5
4,162,997	-		Echvi_3513	0.15	+0.3
4,162,997	-		Echvi_3513	0.15	+1.3
4,163,038	+		Echvi_3513	0.18	-0.3
4,163,039	-		Echvi_3513	0.18	-1.4
4,163,061	+		Echvi_3513	0.20	-1.4
4,163,061	+		Echvi_3513	0.20	+0.8
4,163,062	-		Echvi_3513	0.20	+1.1
4,163,062	-		Echvi_3513	0.20	-0.6
4,163,064	-		Echvi_3513	0.20	+1.4
4,163,091	+		Echvi_3513	0.22	-3.4
4,163,092	-		Echvi_3513	0.23	-0.5
4,163,092	-		Echvi_3513	0.23	+0.6
4,163,113	+		Echvi_3513	0.24	+0.6
4,163,139	+		Echvi_3513	0.26	-0.0
4,163,139	+		Echvi_3513	0.26	-1.1
4,163,139	+		Echvi_3513	0.26	+1.5
4,163,140	-		Echvi_3513	0.27	+0.1
4,163,141	+		Echvi_3513	0.27	-0.1
4,163,141	+		Echvi_3513	0.27	-0.1
4,163,142	-		Echvi_3513	0.27	-0.4
4,163,160	+		Echvi_3513	0.28	-1.1
4,163,160	+		Echvi_3513	0.28	-1.1
4,163,160	+		Echvi_3513	0.28	-2.0
4,163,160	+		Echvi_3513	0.28	-0.3
4,163,160	+		Echvi_3513	0.28	+1.7
4,163,160	+		Echvi_3513	0.28	+0.0
4,163,161	-		Echvi_3513	0.28	+0.1
4,163,161	-		Echvi_3513	0.28	+0.4
4,163,161	-		Echvi_3513	0.28	-1.4
4,163,161	-		Echvi_3513	0.28	-0.2
4,163,163	-		Echvi_3513	0.28	-0.5
4,163,190	-		Echvi_3513	0.31	+0.5
4,163,195	-		Echvi_3513	0.31	-0.2
4,163,195	-		Echvi_3513	0.31	-0.8
4,163,195	-		Echvi_3513	0.31	+1.2
4,163,234	+		Echvi_3513	0.34	+0.1
4,163,234	+		Echvi_3513	0.34	-0.9
4,163,234	+		Echvi_3513	0.34	-0.2
4,163,235	-		Echvi_3513	0.34	-1.3
4,163,236	+		Echvi_3513	0.34	-0.3
4,163,237	-		Echvi_3513	0.34	+0.8
4,163,237	-		Echvi_3513	0.34	+1.0
4,163,247	+		Echvi_3513	0.35	-0.3
4,163,248	-		Echvi_3513	0.35	-0.1
4,163,250	+		Echvi_3513	0.36	+0.0
4,163,251	-		Echvi_3513	0.36	-0.8
4,163,251	-		Echvi_3513	0.36	-0.9
4,163,343	+		Echvi_3513	0.43	+1.2
4,163,343	+		Echvi_3513	0.43	+0.5
4,163,344	-		Echvi_3513	0.43	-0.3
4,163,346	+		Echvi_3513	0.43	+3.6
4,163,346	+		Echvi_3513	0.43	-0.3
4,163,346	+		Echvi_3513	0.43	+0.7
4,163,347	-		Echvi_3513	0.44	-0.5
4,163,358	-		Echvi_3513	0.44	+0.4
4,163,500	-		Echvi_3513	0.56	-0.1
4,163,549	+		Echvi_3513	0.60	-1.2
4,163,633	+		Echvi_3513	0.67	+0.6
4,163,634	-		Echvi_3513	0.67	+0.8
4,163,654	+		Echvi_3513	0.69	-0.1
4,163,655	-		Echvi_3513	0.69	-0.6
4,163,674	-		Echvi_3513	0.70	-0.8
4,163,762	+		Echvi_3513	0.78	-0.9