Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3212

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,809,172	-		Echvi_3210	0.57	-1.8
3,809,173	+		Echvi_3210	0.57	-0.3
3,809,174	-		Echvi_3210	0.57	-1.1
3,809,174	-		Echvi_3210	0.57	+0.7
3,809,178	+		Echvi_3210	0.58	+2.5
3,809,179	-		Echvi_3210	0.58	+1.0
3,809,179	-		Echvi_3210	0.58	-0.6
3,809,179	-		Echvi_3210	0.58	-0.6
3,809,180	+		Echvi_3210	0.59	+0.2
3,809,180	+		Echvi_3210	0.59	-1.4
3,809,180	+		Echvi_3210	0.59	+1.0
3,809,180	+		Echvi_3210	0.59	+1.2
3,809,181	-		Echvi_3210	0.59	+0.2
3,809,181	-		Echvi_3210	0.59	+0.6
3,809,190	+		Echvi_3210	0.61	+1.0
3,809,200	+		Echvi_3210	0.63	-1.4
3,809,212	+		Echvi_3210	0.65	-0.2
3,809,288	+		Echvi_3210	0.80	-0.1
3,809,289	-		Echvi_3210	0.80	-0.8
3,809,363	+				-0.3
3,809,363	+				-0.6
3,809,363	+				-0.6
3,809,364	-				+1.8
3,809,406	+				+0.4
3,809,406	-				-0.8
3,809,407	+				+0.2
3,809,407	+				-0.9
3,809,408	-				-1.5
3,809,410	+				-0.7
3,809,410	+				-1.1
3,809,410	+				-1.3
3,809,411	-				+2.0
3,809,411	-				-1.6
3,809,417	+				-1.0
3,809,417	+				+0.2
3,809,417	+				-1.6
3,809,418	-				+0.6
3,809,422	+				+0.4
3,809,422	+				-0.6
3,809,520	+		Echvi_3211	0.21	-2.9
3,809,546	+		Echvi_3211	0.27	-0.0
3,809,546	+		Echvi_3211	0.27	-0.2
3,809,547	-		Echvi_3211	0.27	+0.2
3,809,638	-		Echvi_3211	0.45	+0.2
3,809,638	-		Echvi_3211	0.45	-1.0
3,809,775	+		Echvi_3211	0.73	-0.2
3,809,777	+		Echvi_3211	0.74	-0.5
3,809,777	+		Echvi_3211	0.74	+0.7
3,809,777	+		Echvi_3211	0.74	-2.0
3,809,787	-		Echvi_3211	0.76	-2.0
3,809,817	+		Echvi_3211	0.82	+0.3
3,809,817	+		Echvi_3211	0.82	-1.5
3,809,817	+		Echvi_3211	0.82	+2.3
3,809,817	+		Echvi_3211	0.82	-1.3
3,809,817	+		Echvi_3211	0.82	-1.1
3,809,818	-		Echvi_3211	0.82	-0.8
3,809,881	+				+0.1
3,809,893	+				+0.2
3,809,894	-				-1.7
3,809,912	-				-0.5
3,809,914	+				-1.1
3,809,981	+				-0.8
3,809,982	-				-2.1
3,809,984	+				+0.4
3,809,987	+				-0.7
3,810,220	+				-0.6
3,810,224	-				-1.2
3,810,249	+				-0.6
3,810,249	+				+0.1
3,810,249	+				+0.0
3,810,249	+				-0.2
3,810,249	+				-0.4
3,810,271	+				-2.4
3,810,272	-				+2.0
3,810,385	+		Echvi_3212	0.15	+0.4
3,810,385	+		Echvi_3212	0.15	-0.3
3,810,387	+		Echvi_3212	0.15	-0.6
3,810,387	+		Echvi_3212	0.15	+0.1
3,810,387	+		Echvi_3212	0.15	+0.0
3,810,387	+		Echvi_3212	0.15	+0.3
3,810,430	+		Echvi_3212	0.17	-1.2
3,810,430	+		Echvi_3212	0.17	-0.1
3,810,430	+		Echvi_3212	0.17	+0.2
3,810,511	+		Echvi_3212	0.22	-0.2
3,810,511	+		Echvi_3212	0.22	-0.1
3,810,531	+		Echvi_3212	0.23	+0.4
3,810,531	+		Echvi_3212	0.23	+0.0
3,810,531	+		Echvi_3212	0.23	+0.2
3,810,566	-		Echvi_3212	0.25	+2.4
3,810,637	+		Echvi_3212	0.29	+0.2
3,810,821	+		Echvi_3212	0.39	-0.4
3,810,854	+		Echvi_3212	0.41	-0.9
3,810,925	+		Echvi_3212	0.45	+0.1
3,810,925	+		Echvi_3212	0.45	-0.4
3,810,925	+		Echvi_3212	0.45	-0.4
3,810,933	-		Echvi_3212	0.45	+1.6
3,811,043	+		Echvi_3212	0.52	-1.0
3,811,043	+		Echvi_3212	0.52	-0.3
3,811,109	+		Echvi_3212	0.55	+0.4
3,811,109	+		Echvi_3212	0.55	-1.1
3,811,109	+		Echvi_3212	0.55	+1.0
3,811,120	+		Echvi_3212	0.56	-0.5
3,811,120	+		Echvi_3212	0.56	-1.0
3,811,131	+		Echvi_3212	0.57	-1.0
3,811,131	+		Echvi_3212	0.57	+0.7
3,811,176	+		Echvi_3212	0.59	+0.9
3,811,180	+		Echvi_3212	0.59	-1.1
3,811,181	-		Echvi_3212	0.59	-0.3
3,811,201	-		Echvi_3212	0.60	-0.2
3,811,298	+		Echvi_3212	0.66	+0.1
3,811,352	+		Echvi_3212	0.69	+0.0
3,811,408	+		Echvi_3212	0.72	+0.4
3,811,408	+		Echvi_3212	0.72	+0.8
3,811,412	+		Echvi_3212	0.72	-1.4
3,811,425	+		Echvi_3212	0.73	-0.7
3,811,429	+		Echvi_3212	0.73	+1.0
3,811,429	+		Echvi_3212	0.73	-1.0
3,811,430	-		Echvi_3212	0.73	-0.4
3,811,431	+		Echvi_3212	0.73	+0.0
3,811,432	-		Echvi_3212	0.73	-0.3
3,811,439	+		Echvi_3212	0.74	-0.8
3,811,458	+		Echvi_3212	0.75	-2.5
3,811,458	+		Echvi_3212	0.75	+0.3
3,811,458	+		Echvi_3212	0.75	-0.6
3,811,459	-		Echvi_3212	0.75	-0.1
3,811,603	+		Echvi_3212	0.83	-1.6
3,811,604	-		Echvi_3212	0.83	-0.8
3,811,607	-		Echvi_3212	0.83	-1.2
3,811,614	-		Echvi_3212	0.83	-1.8
3,811,636	+		Echvi_3212	0.85	+0.6
3,811,636	+		Echvi_3212	0.85	+0.6
3,811,636	+		Echvi_3212	0.85	+0.0
3,811,636	+		Echvi_3212	0.85	+0.1
3,811,637	-		Echvi_3212	0.85	+0.2
3,811,640	+		Echvi_3212	0.85	-0.8
3,811,640	+		Echvi_3212	0.85	+0.1
3,811,658	+		Echvi_3212	0.86	-1.6
3,811,658	+		Echvi_3212	0.86	-0.3
3,811,659	-		Echvi_3212	0.86	-1.6
3,811,659	-		Echvi_3212	0.86	-1.3
3,811,659	-		Echvi_3212	0.86	+2.6
3,811,705	+		Echvi_3212	0.89	-2.6
3,811,747	+				-0.8
3,811,748	-				-1.0
3,811,929	+				-0.2
3,811,960	+				-0.5
3,811,998	+				+0.0
3,812,048	+		Echvi_3213	0.11	+0.2
3,812,107	+		Echvi_3213	0.16	+0.0
3,812,109	+		Echvi_3213	0.16	-0.4
3,812,168	+		Echvi_3213	0.21	-1.5
3,812,203	+		Echvi_3213	0.23	+1.3
3,812,203	+		Echvi_3213	0.23	-0.3
3,812,362	+		Echvi_3213	0.36	-2.5
3,812,495	+		Echvi_3213	0.47	+0.4
3,812,563	-		Echvi_3213	0.52	-0.3
3,812,643	-		Echvi_3213	0.59	+1.0
3,812,708	+		Echvi_3213	0.64	+0.2
3,812,708	+		Echvi_3213	0.64	+0.4
3,812,710	+		Echvi_3213	0.64	+0.2
3,812,759	+		Echvi_3213	0.68	+0.6
3,812,767	+		Echvi_3213	0.69	+0.4
3,812,780	-		Echvi_3213	0.70	-0.3
3,812,800	+		Echvi_3213	0.71	-0.2
3,812,800	+		Echvi_3213	0.71	-1.3
3,812,820	+		Echvi_3213	0.73	+1.0
3,812,850	+		Echvi_3213	0.75	+0.5