Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2840

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,398,913	+		Echvi_2837	0.70	-1.8
3,398,913	+		Echvi_2837	0.70	-0.5
3,398,914	-		Echvi_2837	0.70	-0.0
3,398,917	+		Echvi_2837	0.70	+0.6
3,398,951	+		Echvi_2837	0.74	+0.2
3,398,951	+		Echvi_2837	0.74	-0.5
3,399,155	-				+0.7
3,399,299	-		Echvi_2838	0.26	+0.9
3,399,357	-		Echvi_2838	0.39	+1.4
3,399,375	+		Echvi_2838	0.44	+0.1
3,399,483	+		Echvi_2838	0.68	+0.2
3,399,484	-		Echvi_2838	0.68	-0.2
3,399,484	-		Echvi_2838	0.68	-0.4
3,399,507	+		Echvi_2838	0.74	+0.3
3,399,607	+				+0.4
3,399,607	+				-0.2
3,399,608	-				+0.4
3,399,622	-				-0.5
3,399,631	-				+0.5
3,399,633	-				-0.7
3,399,636	-				-0.5
3,399,636	-				-0.6
3,399,667	+		Echvi_2839	0.17	+0.1
3,399,667	+		Echvi_2839	0.17	+0.7
3,399,667	+		Echvi_2839	0.17	+0.4
3,399,794	-		Echvi_2839	0.83	+0.1
3,399,815	-				+0.5
3,399,815	-				-0.3
3,399,820	-				+0.3
3,399,848	-				+0.6
3,399,848	-				+0.4
3,399,850	+				-1.1
3,399,856	+				-1.3
3,399,902	+				-0.3
3,399,974	-				+0.7
3,399,981	+				-0.5
3,400,072	-		Echvi_2840	0.11	-0.1
3,400,092	-		Echvi_2840	0.12	-1.2
3,400,092	-		Echvi_2840	0.12	-0.4
3,400,103	-		Echvi_2840	0.13	-0.7
3,400,108	-		Echvi_2840	0.13	+0.1
3,400,215	+		Echvi_2840	0.19	-0.5
3,400,270	-		Echvi_2840	0.22	+0.1
3,400,275	+		Echvi_2840	0.22	-0.0
3,400,276	-		Echvi_2840	0.22	-0.3
3,400,297	+		Echvi_2840	0.23	+0.4
3,400,316	+		Echvi_2840	0.25	-0.0
3,400,317	-		Echvi_2840	0.25	-0.4
3,400,317	-		Echvi_2840	0.25	-0.3
3,400,317	-		Echvi_2840	0.25	-1.4
3,400,317	-		Echvi_2840	0.25	+0.5
3,400,317	-		Echvi_2840	0.25	-0.9
3,400,317	-		Echvi_2840	0.25	-1.2
3,400,318	+		Echvi_2840	0.25	-0.5
3,400,319	-		Echvi_2840	0.25	-2.0
3,400,327	+		Echvi_2840	0.25	+1.2
3,400,340	+		Echvi_2840	0.26	-2.0
3,400,364	+		Echvi_2840	0.27	-0.0
3,400,364	+		Echvi_2840	0.27	-0.8
3,400,364	+		Echvi_2840	0.27	-1.6
3,400,365	-		Echvi_2840	0.27	-0.7
3,400,390	+		Echvi_2840	0.29	-0.7
3,400,391	-		Echvi_2840	0.29	-0.4
3,400,403	+		Echvi_2840	0.29	+2.7
3,400,404	-		Echvi_2840	0.29	+0.2
3,400,520	-		Echvi_2840	0.36	+0.6
3,400,520	-		Echvi_2840	0.36	-1.4
3,400,575	+		Echvi_2840	0.39	-0.2
3,400,629	+		Echvi_2840	0.42	-0.3
3,400,650	+		Echvi_2840	0.43	-0.8
3,400,650	+		Echvi_2840	0.43	-0.6
3,400,651	-		Echvi_2840	0.43	-1.6
3,400,659	+		Echvi_2840	0.44	-1.0
3,400,660	-		Echvi_2840	0.44	-0.4
3,400,687	+		Echvi_2840	0.45	-0.5
3,400,713	+		Echvi_2840	0.47	-0.3
3,400,713	+		Echvi_2840	0.47	-0.2
3,400,713	+		Echvi_2840	0.47	-1.0
3,400,714	-		Echvi_2840	0.47	-1.2
3,400,714	-		Echvi_2840	0.47	-0.5
3,400,714	-		Echvi_2840	0.47	-0.6
3,400,714	-		Echvi_2840	0.47	-0.3
3,400,719	+		Echvi_2840	0.47	+0.5
3,400,719	+		Echvi_2840	0.47	+1.0
3,400,720	-		Echvi_2840	0.47	-0.3
3,400,720	-		Echvi_2840	0.47	-0.2
3,400,729	-		Echvi_2840	0.48	-0.1
3,400,821	-		Echvi_2840	0.53	+0.2
3,400,858	+		Echvi_2840	0.55	+0.6
3,401,256	+		Echvi_2840	0.78	-0.3
3,401,262	+		Echvi_2840	0.78	-0.6
3,401,288	+		Echvi_2840	0.79	+1.1
3,401,288	+		Echvi_2840	0.79	-0.6
3,401,288	+		Echvi_2840	0.79	-1.2
3,401,309	-		Echvi_2840	0.81	-0.7
3,401,309	-		Echvi_2840	0.81	-0.5
3,401,336	-		Echvi_2840	0.82	+1.1
3,401,429	-		Echvi_2840	0.87	-0.5
3,401,457	+		Echvi_2840	0.89	+2.9
3,401,461	+		Echvi_2840	0.89	+0.8
3,401,461	+		Echvi_2840	0.89	+1.4
3,401,462	-		Echvi_2840	0.89	-2.1
3,401,462	-		Echvi_2840	0.89	-0.1
3,401,462	-		Echvi_2840	0.89	-0.2
3,401,467	-		Echvi_2840	0.89	-0.6
3,401,516	-				-0.0
3,401,615	-				-2.0
3,401,615	-				+0.6
3,401,657	+				+0.3
3,401,657	+				-2.2
3,401,657	+				-0.2
3,401,657	+				+1.4
3,401,658	-				+0.2
3,401,721	+				-1.3
3,401,722	-				-0.8
3,401,772	+				+0.1
3,401,773	-				-0.2
3,401,773	-				+0.1
3,401,773	-				-0.1
3,401,790	+				-1.1
3,401,790	+				+0.2
3,401,792	+				-1.1
3,401,792	+				+0.4
3,401,792	+				+0.6
3,401,792	+				-0.8
3,401,792	+				-0.0
3,401,792	+				-0.2
3,401,793	-				+0.3
3,401,793	-				+0.2
3,401,793	-				+0.0
3,401,793	-				-1.2
3,401,793	-				+1.4
3,401,794	+				-0.7
3,401,794	+				-0.8
3,401,794	+				-0.2
3,401,794	+				+0.2
3,401,794	+				-0.1
3,401,794	+				-0.2
3,401,794	+				+0.6
3,401,794	+				-0.7
3,401,795	-				-1.6
3,401,795	-				-0.7
3,401,795	-				-1.0
3,401,795	-				-1.3
3,401,795	-				+0.8
3,401,795	-				-1.8
3,401,795	-				-0.2
3,401,795	-				+0.5
3,401,795	-				-3.2
3,401,796	+				+0.3
3,401,796	+				+0.7
3,401,796	+				+0.1
3,401,796	+				-1.4
3,401,796	+				-0.6
3,401,797	-				+0.8
3,401,797	-				-0.5
3,401,797	-				+0.4
3,401,797	-				+1.6
3,401,802	-				-0.2
3,401,802	-				+1.7
3,401,871	+		Echvi_2841	0.14	-0.1
3,401,871	+		Echvi_2841	0.14	-0.8
3,401,872	-		Echvi_2841	0.14	+0.9
3,401,872	-		Echvi_2841	0.14	-0.4
3,402,005	+		Echvi_2841	0.24	+0.2
3,402,083	+		Echvi_2841	0.29	-2.4
3,402,113	+		Echvi_2841	0.32	-0.3
3,402,113	+		Echvi_2841	0.32	+0.3
3,402,113	+		Echvi_2841	0.32	-2.9
3,402,114	-		Echvi_2841	0.32	+1.7
3,402,114	-		Echvi_2841	0.32	-0.9
3,402,116	+		Echvi_2841	0.32	-0.1
3,402,116	+		Echvi_2841	0.32	+0.6
3,402,117	-		Echvi_2841	0.32	+1.6
3,402,121	+		Echvi_2841	0.32	+0.8
3,402,123	+		Echvi_2841	0.32	-1.5
3,402,123	+		Echvi_2841	0.32	+1.8
3,402,124	-		Echvi_2841	0.32	+0.4
3,402,124	-		Echvi_2841	0.32	-1.9
3,402,124	-		Echvi_2841	0.32	+1.7
3,402,144	-		Echvi_2841	0.34	+0.0
3,402,163	+		Echvi_2841	0.35	-0.2
3,402,361	+		Echvi_2841	0.50	+0.0
3,402,393	+		Echvi_2841	0.52	-0.4
3,402,394	-		Echvi_2841	0.52	-0.6
3,402,455	-		Echvi_2841	0.57	+0.3