Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2373 and Echvi_2374 are separated by 40 nucleotides Echvi_2374 and Echvi_2375 overlap by 8 nucleotides Echvi_2375 and Echvi_2376 are separated by 22 nucleotides
Echvi_2373: Echvi_2373 - hypothetical protein, at 2,810,535 to 2,811,389
_2373
Echvi_2374: Echvi_2374 - hypothetical protein, at 2,811,430 to 2,811,966
_2374
Echvi_2375: Echvi_2375 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,811,959 to 2,813,260
_2375
Echvi_2376: Echvi_2376 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 2,813,283 to 2,814,743
_2376
Position (kb)
2811
2812
2813
2814 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2810.968 kb on - strand, within Echvi_2373 at 2810.968 kb on - strand, within Echvi_2373 at 2811.066 kb on - strand, within Echvi_2373 at 2811.260 kb on - strand, within Echvi_2373 at 2811.365 kb on + strand at 2811.366 kb on - strand at 2811.425 kb on + strand at 2813.261 kb on - strand at 2813.261 kb on - strand at 2813.277 kb on - strand at 2813.345 kb on - strand at 2813.345 kb on - strand at 2813.409 kb on - strand at 2813.443 kb on - strand, within Echvi_2376 at 2813.448 kb on + strand, within Echvi_2376 at 2813.448 kb on + strand, within Echvi_2376 at 2813.612 kb on - strand, within Echvi_2376 at 2813.612 kb on - strand, within Echvi_2376 at 2813.640 kb on + strand, within Echvi_2376 at 2813.647 kb on - strand, within Echvi_2376 at 2813.697 kb on - strand, within Echvi_2376 at 2813.759 kb on - strand, within Echvi_2376 at 2813.759 kb on - strand, within Echvi_2376 at 2813.774 kb on - strand, within Echvi_2376 at 2813.774 kb on - strand, within Echvi_2376 at 2813.774 kb on - strand, within Echvi_2376 at 2813.797 kb on - strand, within Echvi_2376 at 2813.799 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.883 kb on - strand, within Echvi_2376 at 2813.952 kb on + strand, within Echvi_2376 at 2813.953 kb on - strand, within Echvi_2376 at 2814.038 kb on - strand, within Echvi_2376 at 2814.196 kb on - strand, within Echvi_2376
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,810,968 - Echvi_2373 0.51 -0.1 2,810,968 - Echvi_2373 0.51 +0.9 2,811,066 - Echvi_2373 0.62 +2.1 2,811,260 - Echvi_2373 0.85 +0.6 2,811,365 + +0.5 2,811,366 - +2.9 2,811,425 + +2.0 2,813,261 - +0.2 2,813,261 - -0.7 2,813,277 - -0.7 2,813,345 - -0.7 2,813,345 - +0.7 2,813,409 - +1.2 2,813,443 - Echvi_2376 0.11 -2.8 2,813,448 + Echvi_2376 0.11 +0.0 2,813,448 + Echvi_2376 0.11 -0.8 2,813,612 - Echvi_2376 0.23 +1.6 2,813,612 - Echvi_2376 0.23 +0.2 2,813,640 + Echvi_2376 0.24 +0.6 2,813,647 - Echvi_2376 0.25 +2.2 2,813,697 - Echvi_2376 0.28 +1.1 2,813,759 - Echvi_2376 0.33 +0.8 2,813,759 - Echvi_2376 0.33 +0.2 2,813,774 - Echvi_2376 0.34 +0.6 2,813,774 - Echvi_2376 0.34 -0.5 2,813,774 - Echvi_2376 0.34 +0.7 2,813,797 - Echvi_2376 0.35 +2.2 2,813,799 - Echvi_2376 0.35 +0.2 2,813,867 - Echvi_2376 0.40 -0.9 2,813,867 - Echvi_2376 0.40 +0.6 2,813,867 - Echvi_2376 0.40 -0.5 2,813,867 - Echvi_2376 0.40 +0.7 2,813,867 - Echvi_2376 0.40 +0.5 2,813,867 - Echvi_2376 0.40 +1.2 2,813,867 - Echvi_2376 0.40 +0.0 2,813,867 - Echvi_2376 0.40 -0.8 2,813,883 - Echvi_2376 0.41 +0.5 2,813,952 + Echvi_2376 0.46 -1.0 2,813,953 - Echvi_2376 0.46 +0.2 2,814,038 - Echvi_2376 0.52 +0.7 2,814,196 - Echvi_2376 0.62 -0.2
Or see this region's nucleotide sequence