Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1583 and Echvi_1584 are separated by 246 nucleotides Echvi_1584 and Echvi_1585 are separated by 74 nucleotides
Echvi_1583: Echvi_1583 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 1,819,590 to 1,822,112
_1583
Echvi_1584: Echvi_1584 - Transcriptional regulators, at 1,822,359 to 1,822,808
_1584
Echvi_1585: Echvi_1585 - Uncharacterized conserved protein, at 1,822,883 to 1,823,410
_1585
Position (kb)
1822
1823 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1821.424 kb on - strand, within Echvi_1583 at 1821.443 kb on - strand, within Echvi_1583 at 1821.495 kb on + strand, within Echvi_1583 at 1821.762 kb on - strand, within Echvi_1583 at 1821.810 kb on + strand, within Echvi_1583 at 1821.818 kb on + strand, within Echvi_1583 at 1821.819 kb on - strand, within Echvi_1583 at 1821.832 kb on + strand, within Echvi_1583 at 1821.833 kb on - strand, within Echvi_1583 at 1821.919 kb on + strand at 1821.919 kb on + strand at 1821.920 kb on - strand at 1821.931 kb on + strand at 1821.956 kb on - strand at 1821.964 kb on + strand at 1821.965 kb on - strand at 1821.965 kb on - strand at 1822.017 kb on + strand at 1822.017 kb on + strand at 1822.017 kb on + strand at 1822.018 kb on - strand at 1822.018 kb on - strand at 1822.018 kb on - strand at 1822.018 kb on - strand at 1822.068 kb on - strand at 1822.070 kb on + strand at 1822.070 kb on + strand at 1822.072 kb on + strand at 1822.073 kb on - strand at 1822.073 kb on - strand at 1822.080 kb on - strand at 1822.100 kb on - strand at 1822.110 kb on + strand at 1822.241 kb on - strand at 1822.394 kb on + strand at 1822.405 kb on - strand, within Echvi_1584 at 1822.407 kb on - strand, within Echvi_1584 at 1822.429 kb on + strand, within Echvi_1584 at 1822.429 kb on + strand, within Echvi_1584 at 1822.443 kb on + strand, within Echvi_1584 at 1822.444 kb on - strand, within Echvi_1584 at 1822.445 kb on + strand, within Echvi_1584 at 1822.446 kb on - strand, within Echvi_1584 at 1822.500 kb on + strand, within Echvi_1584 at 1822.501 kb on - strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.502 kb on + strand, within Echvi_1584 at 1822.503 kb on - strand, within Echvi_1584 at 1822.503 kb on - strand, within Echvi_1584 at 1822.503 kb on - strand, within Echvi_1584 at 1822.503 kb on - strand, within Echvi_1584 at 1822.549 kb on + strand, within Echvi_1584 at 1822.573 kb on + strand, within Echvi_1584 at 1822.612 kb on + strand, within Echvi_1584 at 1822.634 kb on + strand, within Echvi_1584 at 1822.666 kb on + strand, within Echvi_1584 at 1822.666 kb on + strand, within Echvi_1584 at 1822.667 kb on - strand, within Echvi_1584 at 1822.667 kb on - strand, within Echvi_1584 at 1822.670 kb on + strand, within Echvi_1584 at 1822.670 kb on + strand, within Echvi_1584 at 1822.671 kb on - strand, within Echvi_1584 at 1822.673 kb on + strand, within Echvi_1584 at 1822.674 kb on - strand, within Echvi_1584 at 1822.679 kb on + strand, within Echvi_1584 at 1822.679 kb on + strand, within Echvi_1584 at 1822.772 kb on + strand at 1822.773 kb on - strand at 1822.773 kb on - strand at 1822.773 kb on - strand at 1822.773 kb on - strand at 1822.777 kb on + strand at 1822.798 kb on + strand at 1823.026 kb on + strand, within Echvi_1585 at 1823.027 kb on - strand, within Echvi_1585 at 1823.027 kb on - strand, within Echvi_1585 at 1823.027 kb on - strand, within Echvi_1585 at 1823.027 kb on - strand, within Echvi_1585 at 1823.158 kb on + strand, within Echvi_1585 at 1823.174 kb on + strand, within Echvi_1585 at 1823.175 kb on - strand, within Echvi_1585 at 1823.270 kb on - strand, within Echvi_1585 at 1823.270 kb on - strand, within Echvi_1585 at 1823.296 kb on + strand, within Echvi_1585 at 1823.296 kb on + strand at 1823.297 kb on - strand, within Echvi_1585 at 1823.323 kb on + strand, within Echvi_1585 at 1823.372 kb on - strand at 1823.401 kb on + strand at 1823.409 kb on - strand at 1823.421 kb on + strand at 1823.422 kb on - strand at 1823.423 kb on + strand at 1823.424 kb on - strand at 1823.424 kb on - strand at 1823.424 kb on - strand at 1823.424 kb on - strand at 1823.424 kb on - strand at 1823.425 kb on + strand at 1823.425 kb on + strand at 1823.425 kb on + strand at 1823.426 kb on - strand at 1823.426 kb on - strand at 1823.426 kb on - strand at 1823.426 kb on - strand at 1823.436 kb on - strand at 1823.502 kb on - strand at 1823.518 kb on - strand at 1823.576 kb on + strand at 1823.585 kb on + strand at 1823.622 kb on + strand at 1823.774 kb on + strand at 1823.774 kb on + strand at 1823.774 kb on + strand at 1823.774 kb on + strand at 1823.781 kb on + strand at 1823.781 kb on + strand at 1823.794 kb on + strand at 1823.800 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,821,424 - Echvi_1583 0.73 -0.7 1,821,443 - Echvi_1583 0.73 +1.4 1,821,495 + Echvi_1583 0.76 +0.1 1,821,762 - Echvi_1583 0.86 +0.8 1,821,810 + Echvi_1583 0.88 -0.2 1,821,818 + Echvi_1583 0.88 -1.1 1,821,819 - Echvi_1583 0.88 +0.7 1,821,832 + Echvi_1583 0.89 +0.9 1,821,833 - Echvi_1583 0.89 +1.0 1,821,919 + -0.0 1,821,919 + -0.5 1,821,920 - +0.5 1,821,931 + +0.1 1,821,956 - -0.5 1,821,964 + -0.4 1,821,965 - -0.8 1,821,965 - -1.5 1,822,017 + +1.0 1,822,017 + -0.9 1,822,017 + +0.3 1,822,018 - -1.6 1,822,018 - -0.6 1,822,018 - +1.8 1,822,018 - -0.4 1,822,068 - -1.8 1,822,070 + -1.2 1,822,070 + -0.2 1,822,072 + +0.3 1,822,073 - -0.3 1,822,073 - +0.5 1,822,080 - -1.3 1,822,100 - +0.3 1,822,110 + +0.9 1,822,241 - -0.9 1,822,394 + -0.4 1,822,405 - Echvi_1584 0.10 -0.4 1,822,407 - Echvi_1584 0.11 -3.4 1,822,429 + Echvi_1584 0.16 +0.5 1,822,429 + Echvi_1584 0.16 -0.6 1,822,443 + Echvi_1584 0.19 -2.0 1,822,444 - Echvi_1584 0.19 -2.9 1,822,445 + Echvi_1584 0.19 -1.5 1,822,446 - Echvi_1584 0.19 -0.2 1,822,500 + Echvi_1584 0.31 -1.7 1,822,501 - Echvi_1584 0.32 -0.4 1,822,502 + Echvi_1584 0.32 -3.5 1,822,502 + Echvi_1584 0.32 -2.2 1,822,502 + Echvi_1584 0.32 -0.0 1,822,502 + Echvi_1584 0.32 -1.5 1,822,502 + Echvi_1584 0.32 -2.4 1,822,502 + Echvi_1584 0.32 -1.3 1,822,502 + Echvi_1584 0.32 -1.2 1,822,503 - Echvi_1584 0.32 -2.2 1,822,503 - Echvi_1584 0.32 -0.7 1,822,503 - Echvi_1584 0.32 -1.1 1,822,503 - Echvi_1584 0.32 -0.8 1,822,549 + Echvi_1584 0.42 -1.8 1,822,573 + Echvi_1584 0.48 +0.3 1,822,612 + Echvi_1584 0.56 -2.2 1,822,634 + Echvi_1584 0.61 -1.7 1,822,666 + Echvi_1584 0.68 -1.4 1,822,666 + Echvi_1584 0.68 -0.2 1,822,667 - Echvi_1584 0.68 -2.2 1,822,667 - Echvi_1584 0.68 -0.2 1,822,670 + Echvi_1584 0.69 -3.9 1,822,670 + Echvi_1584 0.69 -1.9 1,822,671 - Echvi_1584 0.69 +1.7 1,822,673 + Echvi_1584 0.70 -1.0 1,822,674 - Echvi_1584 0.70 -2.0 1,822,679 + Echvi_1584 0.71 -1.5 1,822,679 + Echvi_1584 0.71 -2.1 1,822,772 + -1.8 1,822,773 - -0.2 1,822,773 - -0.9 1,822,773 - -3.0 1,822,773 - +0.7 1,822,777 + -1.7 1,822,798 + +0.1 1,823,026 + Echvi_1585 0.27 +1.3 1,823,027 - Echvi_1585 0.27 +0.2 1,823,027 - Echvi_1585 0.27 +0.2 1,823,027 - Echvi_1585 0.27 +0.1 1,823,027 - Echvi_1585 0.27 -2.2 1,823,158 + Echvi_1585 0.52 -2.2 1,823,174 + Echvi_1585 0.55 -0.2 1,823,175 - Echvi_1585 0.55 +0.8 1,823,270 - Echvi_1585 0.73 +0.1 1,823,270 - Echvi_1585 0.73 +1.8 1,823,296 + Echvi_1585 0.78 -2.8 1,823,296 + +2.1 1,823,297 - Echvi_1585 0.78 +0.7 1,823,323 + Echvi_1585 0.83 -0.5 1,823,372 - +0.2 1,823,401 + +0.7 1,823,409 - -0.1 1,823,421 + +0.6 1,823,422 - +0.3 1,823,423 + +0.2 1,823,424 - +0.5 1,823,424 - -1.3 1,823,424 - -0.1 1,823,424 - +0.5 1,823,424 - +1.4 1,823,425 + -0.1 1,823,425 + +0.3 1,823,425 + +0.1 1,823,426 - +0.5 1,823,426 - -0.6 1,823,426 - -0.6 1,823,426 - +0.7 1,823,436 - +0.3 1,823,502 - -0.6 1,823,518 - -2.2 1,823,576 + +0.5 1,823,585 + -0.5 1,823,622 + -1.1 1,823,774 + +1.1 1,823,774 + -0.5 1,823,774 + +0.4 1,823,774 + +0.1 1,823,781 + -1.6 1,823,781 + -1.8 1,823,794 + -0.2 1,823,800 + -0.6
Or see this region's nucleotide sequence