Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1466

Experiment: L-Serine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntEchvi_1465 and Echvi_1466 are separated by 0 nucleotidesEchvi_1466 and Echvi_1467 overlap by 8 nucleotidesEchvi_1467 and Echvi_1468 are separated by 7 nucleotides Echvi_1465: Echvi_1465 - penicillin-binding protein 2, at 1,678,735 to 1,680,537 _1465 Echvi_1466: Echvi_1466 - hypothetical protein, at 1,680,538 to 1,681,059 _1466 Echvi_1467: Echvi_1467 - rod shape-determining protein MreC, at 1,681,052 to 1,681,885 _1467 Echvi_1468: Echvi_1468 - cell shape determining protein, MreB/Mrl family, at 1,681,893 to 1,682,921 _1468 Position (kb) 1680 1681 1682Strain fitness (log2 ratio) -1 0 1at 1681.119 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
remove
1,681,119 - -1.6

Or see this region's nucleotide sequence