Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0556 and Echvi_0557 are separated by 263 nucleotides Echvi_0557 and Echvi_0558 are separated by 208 nucleotides Echvi_0558 and Echvi_0559 are separated by 498 nucleotides
Echvi_0556: Echvi_0556 - Alpha-L-fucosidase, at 627,746 to 629,080
_0556
Echvi_0557: Echvi_0557 - Molecular chaperone (small heat shock protein), at 629,344 to 629,772
_0557
Echvi_0558: Echvi_0558 - periplasmic serine protease, Do/DeqQ family, at 629,981 to 631,468
_0558
Echvi_0559: Echvi_0559 - hypothetical protein, at 631,967 to 633,889
_0559
Position (kb) 629
630
631
632 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 628.991 kb on + strand at 629.088 kb on - strand at 629.099 kb on + strand at 629.172 kb on - strand at 629.172 kb on - strand at 629.292 kb on - strand at 629.340 kb on + strand at 629.340 kb on + strand at 629.343 kb on + strand at 629.344 kb on - strand at 629.344 kb on - strand at 629.359 kb on + strand at 629.359 kb on + strand at 629.359 kb on + strand at 629.360 kb on - strand at 629.388 kb on + strand, within Echvi_0557 at 629.388 kb on + strand, within Echvi_0557 at 629.388 kb on + strand, within Echvi_0557 at 629.488 kb on + strand, within Echvi_0557 at 629.488 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.547 kb on - strand, within Echvi_0557 at 629.547 kb on - strand, within Echvi_0557 at 629.553 kb on + strand, within Echvi_0557 at 629.727 kb on + strand, within Echvi_0557 at 629.727 kb on + strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.770 kb on + strand at 629.778 kb on - strand at 629.881 kb on - strand at 629.894 kb on + strand at 629.937 kb on - strand at 630.027 kb on + strand at 630.028 kb on - strand at 630.028 kb on - strand at 630.055 kb on - strand at 630.085 kb on + strand at 630.085 kb on + strand at 630.086 kb on - strand at 630.106 kb on + strand at 630.127 kb on - strand at 630.187 kb on - strand, within Echvi_0558 at 630.215 kb on - strand, within Echvi_0558 at 630.275 kb on - strand, within Echvi_0558 at 630.340 kb on - strand, within Echvi_0558 at 630.353 kb on + strand, within Echvi_0558 at 630.354 kb on - strand, within Echvi_0558 at 630.354 kb on - strand, within Echvi_0558 at 630.378 kb on + strand at 630.378 kb on + strand, within Echvi_0558 at 630.396 kb on + strand, within Echvi_0558 at 630.397 kb on - strand, within Echvi_0558 at 630.411 kb on - strand, within Echvi_0558 at 630.425 kb on + strand, within Echvi_0558 at 630.426 kb on - strand, within Echvi_0558 at 630.426 kb on - strand, within Echvi_0558 at 630.433 kb on + strand, within Echvi_0558 at 630.434 kb on - strand, within Echvi_0558 at 630.438 kb on + strand, within Echvi_0558 at 630.454 kb on + strand, within Echvi_0558 at 630.455 kb on - strand, within Echvi_0558 at 630.474 kb on + strand, within Echvi_0558 at 630.504 kb on + strand, within Echvi_0558 at 630.555 kb on + strand, within Echvi_0558 at 630.574 kb on + strand, within Echvi_0558 at 630.718 kb on + strand, within Echvi_0558 at 630.798 kb on + strand, within Echvi_0558 at 630.799 kb on - strand, within Echvi_0558 at 630.842 kb on + strand, within Echvi_0558 at 630.906 kb on - strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.939 kb on + strand, within Echvi_0558 at 630.940 kb on - strand, within Echvi_0558 at 630.941 kb on + strand, within Echvi_0558 at 630.941 kb on + strand, within Echvi_0558 at 630.941 kb on + strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 630.942 kb on - strand, within Echvi_0558 at 631.000 kb on + strand, within Echvi_0558 at 631.001 kb on - strand, within Echvi_0558 at 631.015 kb on - strand, within Echvi_0558 at 631.048 kb on - strand, within Echvi_0558 at 631.097 kb on + strand, within Echvi_0558 at 631.098 kb on - strand, within Echvi_0558 at 631.127 kb on - strand, within Echvi_0558 at 631.156 kb on + strand, within Echvi_0558 at 631.214 kb on - strand, within Echvi_0558 at 631.269 kb on + strand, within Echvi_0558 at 631.270 kb on - strand, within Echvi_0558 at 631.278 kb on + strand, within Echvi_0558 at 631.278 kb on + strand, within Echvi_0558 at 631.279 kb on - strand, within Echvi_0558 at 631.279 kb on - strand, within Echvi_0558 at 631.350 kb on + strand at 631.350 kb on + strand at 631.390 kb on + strand at 631.466 kb on + strand at 631.466 kb on + strand at 631.467 kb on - strand at 631.467 kb on - strand at 631.467 kb on - strand at 631.470 kb on - strand at 631.479 kb on - strand at 631.487 kb on + strand at 631.492 kb on - strand at 631.492 kb on - strand at 631.492 kb on - strand at 631.492 kb on - strand at 631.530 kb on - strand at 631.534 kb on + strand at 631.535 kb on - strand at 631.535 kb on - strand at 631.536 kb on + strand at 631.536 kb on + strand at 631.536 kb on + strand at 631.542 kb on - strand at 631.567 kb on + strand at 631.568 kb on - strand at 631.623 kb on - strand at 631.653 kb on - strand at 631.877 kb on + strand at 631.877 kb on + strand at 631.924 kb on + strand at 631.951 kb on - strand at 631.954 kb on - strand at 631.963 kb on + strand at 632.084 kb on + strand at 632.120 kb on - strand at 632.120 kb on - strand at 632.243 kb on - strand, within Echvi_0559 at 632.262 kb on + strand, within Echvi_0559 at 632.262 kb on + strand, within Echvi_0559 at 632.263 kb on - strand, within Echvi_0559 at 632.263 kb on - strand, within Echvi_0559 at 632.430 kb on - strand, within Echvi_0559
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 628,991 + +0.4 629,088 - +0.1 629,099 + +0.3 629,172 - +0.3 629,172 - +0.1 629,292 - -0.2 629,340 + +0.6 629,340 + -0.7 629,343 + +0.6 629,344 - -0.0 629,344 - +0.4 629,359 + -1.1 629,359 + -1.0 629,359 + +0.1 629,360 - +0.2 629,388 + Echvi_0557 0.10 +0.0 629,388 + Echvi_0557 0.10 -0.6 629,388 + Echvi_0557 0.10 -0.1 629,488 + Echvi_0557 0.34 +0.8 629,488 + Echvi_0557 0.34 -0.5 629,546 + Echvi_0557 0.47 -0.4 629,546 + Echvi_0557 0.47 +0.5 629,546 + Echvi_0557 0.47 +0.1 629,547 - Echvi_0557 0.47 -0.2 629,547 - Echvi_0557 0.47 -2.0 629,553 + Echvi_0557 0.49 -0.4 629,727 + Echvi_0557 0.89 -1.7 629,727 + Echvi_0557 0.89 -1.7 629,728 - Echvi_0557 0.90 +0.0 629,728 - Echvi_0557 0.90 -0.2 629,728 - Echvi_0557 0.90 -0.7 629,728 - Echvi_0557 0.90 -0.1 629,770 + +1.5 629,778 - -0.9 629,881 - -1.8 629,894 + +3.3 629,937 - -0.6 630,027 + +0.4 630,028 - +1.7 630,028 - +0.7 630,055 - +0.1 630,085 + +1.0 630,085 + -0.9 630,086 - -0.1 630,106 + +0.9 630,127 - +0.5 630,187 - Echvi_0558 0.14 -0.2 630,215 - Echvi_0558 0.16 +0.5 630,275 - Echvi_0558 0.20 -0.6 630,340 - Echvi_0558 0.24 +0.8 630,353 + Echvi_0558 0.25 +2.4 630,354 - Echvi_0558 0.25 +0.8 630,354 - Echvi_0558 0.25 +0.9 630,378 + +2.1 630,378 + Echvi_0558 0.27 +1.4 630,396 + Echvi_0558 0.28 +1.3 630,397 - Echvi_0558 0.28 +0.6 630,411 - Echvi_0558 0.29 -0.2 630,425 + Echvi_0558 0.30 +3.6 630,426 - Echvi_0558 0.30 +0.3 630,426 - Echvi_0558 0.30 -1.0 630,433 + Echvi_0558 0.30 +0.4 630,434 - Echvi_0558 0.30 +0.7 630,438 + Echvi_0558 0.31 +1.7 630,454 + Echvi_0558 0.32 +2.6 630,455 - Echvi_0558 0.32 -0.6 630,474 + Echvi_0558 0.33 +1.3 630,504 + Echvi_0558 0.35 +1.4 630,555 + Echvi_0558 0.39 +1.9 630,574 + Echvi_0558 0.40 +1.4 630,718 + Echvi_0558 0.50 +0.2 630,798 + Echvi_0558 0.55 +1.4 630,799 - Echvi_0558 0.55 +0.3 630,842 + Echvi_0558 0.58 +1.0 630,906 - Echvi_0558 0.62 +0.0 630,939 + Echvi_0558 0.64 +2.6 630,939 + Echvi_0558 0.64 +2.1 630,939 + Echvi_0558 0.64 +2.7 630,939 + Echvi_0558 0.64 +2.8 630,940 - Echvi_0558 0.64 -1.1 630,941 + Echvi_0558 0.65 +2.9 630,941 + Echvi_0558 0.65 +2.8 630,941 + Echvi_0558 0.65 +2.0 630,942 - Echvi_0558 0.65 +0.6 630,942 - Echvi_0558 0.65 -0.9 630,942 - Echvi_0558 0.65 -0.9 630,942 - Echvi_0558 0.65 +1.1 630,942 - Echvi_0558 0.65 +1.0 631,000 + Echvi_0558 0.68 +2.3 631,001 - Echvi_0558 0.69 +0.3 631,015 - Echvi_0558 0.69 -0.9 631,048 - Echvi_0558 0.72 -1.7 631,097 + Echvi_0558 0.75 +2.8 631,098 - Echvi_0558 0.75 +0.3 631,127 - Echvi_0558 0.77 -0.7 631,156 + Echvi_0558 0.79 +3.8 631,214 - Echvi_0558 0.83 -2.7 631,269 + Echvi_0558 0.87 +2.5 631,270 - Echvi_0558 0.87 -0.5 631,278 + Echvi_0558 0.87 +1.9 631,278 + Echvi_0558 0.87 +2.3 631,279 - Echvi_0558 0.87 -0.2 631,279 - Echvi_0558 0.87 -1.9 631,350 + +2.8 631,350 + +2.9 631,390 + +1.2 631,466 + +2.8 631,466 + +2.0 631,467 - +4.1 631,467 - -0.0 631,467 - +0.9 631,470 - +0.8 631,479 - +0.1 631,487 + -1.2 631,492 - +0.1 631,492 - +0.8 631,492 - -2.9 631,492 - +1.1 631,530 - +0.5 631,534 + +0.6 631,535 - +0.1 631,535 - -1.1 631,536 + -2.1 631,536 + -0.9 631,536 + -0.7 631,542 - -1.6 631,567 + -1.9 631,568 - -0.4 631,623 - -0.2 631,653 - -0.1 631,877 + -1.3 631,877 + -1.3 631,924 + -0.7 631,951 - -0.8 631,954 - +2.1 631,963 + -0.2 632,084 + -0.1 632,120 - -0.3 632,120 - -0.1 632,243 - Echvi_0559 0.14 +1.0 632,262 + Echvi_0559 0.15 +0.5 632,262 + Echvi_0559 0.15 -1.0 632,263 - Echvi_0559 0.15 +0.6 632,263 - Echvi_0559 0.15 -0.3 632,430 - Echvi_0559 0.24 -0.4
Or see this region's nucleotide sequence