Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0316

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0315 and Echvi_0316 overlap by 4 nucleotidesEchvi_0316 and Echvi_0317 are separated by 2 nucleotidesEchvi_0317 and Echvi_0318 overlap by 4 nucleotides Echvi_0315: Echvi_0315 - Cell division protein FtsI/penicillin-binding protein 2, at 328,155 to 330,266 _0315 Echvi_0316: Echvi_0316 - hypothetical protein, at 330,263 to 330,664 _0316 Echvi_0317: Echvi_0317 - S-adenosyl-methyltransferase MraW, at 330,667 to 331,575 _0317 Echvi_0318: Echvi_0318 - mraZ protein, at 331,572 to 332,024 _0318 Position (kb) 330 331Strain fitness (log2 ratio) -1 0 1at 330.276 kb on - strandat 330.276 kb on - strandat 330.671 kb on - strandat 331.644 kb on - strand, within Echvi_0318at 331.649 kb on - strand, within Echvi_0318

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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330,276 - +0.2
330,276 - +0.3
330,671 - +1.7
331,644 - Echvi_0318 0.16 -0.8
331,649 - Echvi_0318 0.17 -1.0

Or see this region's nucleotide sequence