Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0141 and Echvi_0142 overlap by 8 nucleotides Echvi_0142 and Echvi_0143 are separated by 17 nucleotides Echvi_0143 and Echvi_0144 overlap by 4 nucleotides
Echvi_0141: Echvi_0141 - Predicted membrane-associated, metal-dependent hydrolase, at 141,044 to 142,135
_0141
Echvi_0142: Echvi_0142 - Domain of Unknown Function (DUF1599)., at 142,128 to 142,679
_0142
Echvi_0143: Echvi_0143 - dihydropteroate synthase, at 142,697 to 143,581
_0143
Echvi_0144: Echvi_0144 - TIGR00159 family protein, at 143,578 to 144,444
_0144
Position (kb) 142
143 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 141.131 kb on + strand at 141.131 kb on + strand at 141.132 kb on - strand at 141.172 kb on + strand, within Echvi_0141 at 141.186 kb on + strand, within Echvi_0141 at 141.186 kb on + strand, within Echvi_0141 at 141.186 kb on + strand, within Echvi_0141 at 141.187 kb on - strand, within Echvi_0141 at 141.190 kb on - strand, within Echvi_0141 at 141.190 kb on - strand, within Echvi_0141 at 141.251 kb on - strand, within Echvi_0141 at 141.253 kb on + strand, within Echvi_0141 at 141.331 kb on + strand, within Echvi_0141 at 141.331 kb on + strand, within Echvi_0141 at 141.331 kb on + strand, within Echvi_0141 at 141.332 kb on - strand, within Echvi_0141 at 141.332 kb on - strand, within Echvi_0141 at 141.332 kb on - strand, within Echvi_0141 at 141.480 kb on + strand, within Echvi_0141 at 141.520 kb on + strand, within Echvi_0141 at 141.520 kb on + strand, within Echvi_0141 at 141.522 kb on + strand, within Echvi_0141 at 141.522 kb on + strand, within Echvi_0141 at 141.523 kb on - strand, within Echvi_0141 at 141.565 kb on + strand, within Echvi_0141 at 141.605 kb on + strand, within Echvi_0141 at 141.753 kb on + strand, within Echvi_0141 at 141.831 kb on + strand, within Echvi_0141 at 141.872 kb on + strand, within Echvi_0141 at 141.873 kb on - strand, within Echvi_0141 at 141.921 kb on - strand, within Echvi_0141 at 141.921 kb on - strand, within Echvi_0141 at 141.941 kb on + strand, within Echvi_0141 at 141.941 kb on + strand, within Echvi_0141 at 141.942 kb on - strand, within Echvi_0141 at 141.942 kb on - strand, within Echvi_0141 at 141.942 kb on - strand, within Echvi_0141 at 141.973 kb on + strand, within Echvi_0141 at 141.973 kb on + strand, within Echvi_0141 at 141.997 kb on + strand, within Echvi_0141 at 142.033 kb on + strand at 142.064 kb on + strand at 142.064 kb on + strand at 142.065 kb on - strand at 142.116 kb on - strand at 142.118 kb on + strand at 142.118 kb on + strand at 143.571 kb on + strand at 143.573 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 141,131 + +0.4 141,131 + -0.6 141,132 - -1.3 141,172 + Echvi_0141 0.12 -1.0 141,186 + Echvi_0141 0.13 +0.7 141,186 + Echvi_0141 0.13 -0.8 141,186 + Echvi_0141 0.13 -0.2 141,187 - Echvi_0141 0.13 -0.1 141,190 - Echvi_0141 0.13 +0.3 141,190 - Echvi_0141 0.13 -0.5 141,251 - Echvi_0141 0.19 -0.0 141,253 + Echvi_0141 0.19 +2.2 141,331 + Echvi_0141 0.26 -1.4 141,331 + Echvi_0141 0.26 +1.6 141,331 + Echvi_0141 0.26 -0.9 141,332 - Echvi_0141 0.26 -1.6 141,332 - Echvi_0141 0.26 +0.4 141,332 - Echvi_0141 0.26 +0.4 141,480 + Echvi_0141 0.40 +2.2 141,520 + Echvi_0141 0.44 -1.2 141,520 + Echvi_0141 0.44 -1.0 141,522 + Echvi_0141 0.44 -0.6 141,522 + Echvi_0141 0.44 -0.2 141,523 - Echvi_0141 0.44 -1.2 141,565 + Echvi_0141 0.48 +1.0 141,605 + Echvi_0141 0.51 -1.7 141,753 + Echvi_0141 0.65 -0.8 141,831 + Echvi_0141 0.72 -1.6 141,872 + Echvi_0141 0.76 -1.0 141,873 - Echvi_0141 0.76 -0.7 141,921 - Echvi_0141 0.80 -0.5 141,921 - Echvi_0141 0.80 -0.5 141,941 + Echvi_0141 0.82 +0.8 141,941 + Echvi_0141 0.82 +0.8 141,942 - Echvi_0141 0.82 -0.0 141,942 - Echvi_0141 0.82 -0.4 141,942 - Echvi_0141 0.82 +0.0 141,973 + Echvi_0141 0.85 -1.7 141,973 + Echvi_0141 0.85 -0.2 141,997 + Echvi_0141 0.87 -1.6 142,033 + -3.2 142,064 + +1.3 142,064 + +0.2 142,065 - -1.0 142,116 - +0.2 142,118 + -0.9 142,118 + +1.4 143,571 + -2.5 143,573 + +0.2
Or see this region's nucleotide sequence