Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08490 and CA264_08495 are separated by 372 nucleotides CA264_08495 and CA264_08500 are separated by 3 nucleotides CA264_08500 and CA264_08505 are separated by 237 nucleotides
CA264_08490: CA264_08490 - hypothetical protein, at 1,973,238 to 1,973,480
_08490
CA264_08495: CA264_08495 - PAS domain-containing sensor histidine kinase, at 1,973,853 to 1,974,941
_08495
CA264_08500: CA264_08500 - hypothetical protein, at 1,974,945 to 1,975,409
_08500
CA264_08505: CA264_08505 - glycosyl transferase family 2, at 1,975,647 to 1,977,290
_08505
Position (kb)
1973
1974
1975 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1972.868 kb on + strand at 1972.877 kb on + strand at 1972.925 kb on + strand at 1973.034 kb on + strand at 1973.034 kb on + strand at 1973.035 kb on - strand at 1973.035 kb on - strand at 1973.035 kb on - strand at 1973.035 kb on - strand at 1973.042 kb on + strand at 1973.042 kb on + strand at 1973.042 kb on + strand at 1973.042 kb on + strand at 1973.043 kb on - strand at 1973.043 kb on - strand at 1973.043 kb on - strand at 1973.043 kb on - strand at 1973.043 kb on - strand at 1973.043 kb on - strand at 1973.082 kb on + strand at 1973.083 kb on - strand at 1973.193 kb on + strand at 1973.202 kb on + strand at 1973.202 kb on + strand at 1973.264 kb on + strand, within CA264_08490 at 1973.359 kb on + strand, within CA264_08490 at 1973.359 kb on + strand, within CA264_08490 at 1973.428 kb on - strand, within CA264_08490 at 1973.499 kb on + strand at 1973.500 kb on - strand at 1973.510 kb on - strand at 1973.521 kb on - strand at 1973.607 kb on - strand at 1973.672 kb on - strand at 1973.672 kb on - strand at 1973.788 kb on + strand at 1973.789 kb on - strand at 1973.790 kb on + strand at 1973.791 kb on - strand at 1973.816 kb on + strand at 1973.842 kb on - strand at 1973.847 kb on - strand at 1973.848 kb on + strand at 1973.849 kb on - strand at 1973.852 kb on + strand at 1973.852 kb on + strand at 1973.879 kb on - strand at 1973.879 kb on - strand at 1973.885 kb on + strand at 1973.887 kb on + strand at 1973.887 kb on + strand at 1973.888 kb on - strand at 1973.888 kb on - strand at 1973.888 kb on - strand at 1973.919 kb on + strand at 1973.920 kb on - strand at 1973.980 kb on + strand, within CA264_08495 at 1973.981 kb on - strand, within CA264_08495 at 1974.003 kb on - strand, within CA264_08495 at 1974.003 kb on - strand, within CA264_08495 at 1974.028 kb on + strand, within CA264_08495 at 1974.033 kb on + strand, within CA264_08495 at 1974.033 kb on + strand, within CA264_08495 at 1974.033 kb on + strand, within CA264_08495 at 1974.034 kb on + strand, within CA264_08495 at 1974.034 kb on - strand, within CA264_08495 at 1974.068 kb on + strand, within CA264_08495 at 1974.069 kb on - strand, within CA264_08495 at 1974.072 kb on + strand, within CA264_08495 at 1974.072 kb on + strand, within CA264_08495 at 1974.073 kb on - strand, within CA264_08495 at 1974.073 kb on - strand, within CA264_08495 at 1974.194 kb on + strand, within CA264_08495 at 1974.197 kb on - strand, within CA264_08495 at 1974.226 kb on - strand, within CA264_08495 at 1974.334 kb on + strand, within CA264_08495 at 1974.343 kb on + strand, within CA264_08495 at 1974.355 kb on + strand, within CA264_08495 at 1974.355 kb on + strand, within CA264_08495 at 1974.356 kb on - strand, within CA264_08495 at 1974.531 kb on + strand, within CA264_08495 at 1974.531 kb on + strand, within CA264_08495 at 1974.531 kb on + strand, within CA264_08495 at 1974.557 kb on + strand, within CA264_08495 at 1974.923 kb on + strand at 1974.923 kb on + strand at 1974.924 kb on - strand at 1974.995 kb on + strand, within CA264_08500 at 1974.996 kb on - strand, within CA264_08500 at 1975.018 kb on + strand, within CA264_08500 at 1975.254 kb on + strand, within CA264_08500 at 1975.255 kb on - strand, within CA264_08500 at 1975.320 kb on + strand, within CA264_08500 at 1975.320 kb on + strand, within CA264_08500 at 1975.360 kb on - strand, within CA264_08500 at 1975.387 kb on + strand at 1975.387 kb on + strand at 1975.462 kb on - strand at 1975.468 kb on + strand at 1975.469 kb on - strand at 1975.472 kb on - strand at 1975.535 kb on + strand at 1975.597 kb on - strand at 1975.649 kb on - strand at 1975.713 kb on - strand at 1975.734 kb on - strand at 1975.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 1,972,868 + +0.1 1,972,877 + -0.2 1,972,925 + -0.6 1,973,034 + +0.0 1,973,034 + -0.2 1,973,035 - +0.6 1,973,035 - -0.5 1,973,035 - +0.1 1,973,035 - +0.1 1,973,042 + -1.3 1,973,042 + +0.0 1,973,042 + -0.1 1,973,042 + -0.4 1,973,043 - +0.2 1,973,043 - +0.4 1,973,043 - -0.4 1,973,043 - -1.9 1,973,043 - +2.9 1,973,043 - +0.0 1,973,082 + -1.6 1,973,083 - +0.0 1,973,193 + +0.0 1,973,202 + -0.2 1,973,202 + +0.7 1,973,264 + CA264_08490 0.11 +0.3 1,973,359 + CA264_08490 0.50 +0.0 1,973,359 + CA264_08490 0.50 -1.0 1,973,428 - CA264_08490 0.78 -0.2 1,973,499 + -0.8 1,973,500 - +0.3 1,973,510 - -1.1 1,973,521 - -0.3 1,973,607 - -0.2 1,973,672 - -0.4 1,973,672 - -0.8 1,973,788 + +0.9 1,973,789 - -0.7 1,973,790 + +0.0 1,973,791 - -0.6 1,973,816 + -0.4 1,973,842 - +0.1 1,973,847 - -0.1 1,973,848 + +0.3 1,973,849 - -0.4 1,973,852 + +0.9 1,973,852 + -0.1 1,973,879 - -0.5 1,973,879 - -0.0 1,973,885 + -0.5 1,973,887 + +0.3 1,973,887 + -0.1 1,973,888 - -0.5 1,973,888 - -0.1 1,973,888 - +0.0 1,973,919 + -1.2 1,973,920 - +0.6 1,973,980 + CA264_08495 0.12 +0.2 1,973,981 - CA264_08495 0.12 -0.9 1,974,003 - CA264_08495 0.14 +0.6 1,974,003 - CA264_08495 0.14 +0.5 1,974,028 + CA264_08495 0.16 -0.7 1,974,033 + CA264_08495 0.17 +0.6 1,974,033 + CA264_08495 0.17 +0.2 1,974,033 + CA264_08495 0.17 +0.0 1,974,034 + CA264_08495 0.17 -0.3 1,974,034 - CA264_08495 0.17 +0.4 1,974,068 + CA264_08495 0.20 +0.4 1,974,069 - CA264_08495 0.20 +0.6 1,974,072 + CA264_08495 0.20 -0.3 1,974,072 + CA264_08495 0.20 -0.4 1,974,073 - CA264_08495 0.20 -0.1 1,974,073 - CA264_08495 0.20 +0.5 1,974,194 + CA264_08495 0.31 -0.5 1,974,197 - CA264_08495 0.32 -0.2 1,974,226 - CA264_08495 0.34 -0.2 1,974,334 + CA264_08495 0.44 +0.3 1,974,343 + CA264_08495 0.45 -0.2 1,974,355 + CA264_08495 0.46 +0.4 1,974,355 + CA264_08495 0.46 -0.8 1,974,356 - CA264_08495 0.46 -0.1 1,974,531 + CA264_08495 0.62 -0.1 1,974,531 + CA264_08495 0.62 +0.0 1,974,531 + CA264_08495 0.62 +0.4 1,974,557 + CA264_08495 0.65 -0.6 1,974,923 + +0.3 1,974,923 + +1.6 1,974,924 - +0.1 1,974,995 + CA264_08500 0.11 -0.9 1,974,996 - CA264_08500 0.11 +1.1 1,975,018 + CA264_08500 0.16 -1.0 1,975,254 + CA264_08500 0.66 +0.1 1,975,255 - CA264_08500 0.67 +0.4 1,975,320 + CA264_08500 0.81 -0.3 1,975,320 + CA264_08500 0.81 -0.1 1,975,360 - CA264_08500 0.89 -0.2 1,975,387 + -0.5 1,975,387 + +1.8 1,975,462 - +0.2 1,975,468 + -0.8 1,975,469 - -0.8 1,975,472 - +1.4 1,975,535 + +0.3 1,975,597 - -0.5 1,975,649 - -1.4 1,975,713 - -0.3 1,975,734 - +1.1 1,975,734 - -0.3
Or see this region's nucleotide sequence