Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07400 and CA264_07405 are separated by 6 nucleotides CA264_07405 and CA264_07410 are separated by 171 nucleotides
CA264_07400: CA264_07400 - threonine--tRNA ligase, at 1,703,862 to 1,705,799
_07400
CA264_07405: CA264_07405 - hypothetical protein, at 1,705,806 to 1,706,885
_07405
CA264_07410: CA264_07410 - hypothetical protein, at 1,707,057 to 1,707,845
_07410
Position (kb)
1705
1706
1707 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1705.799 kb on + strand at 1705.799 kb on + strand at 1705.834 kb on - strand at 1705.870 kb on + strand at 1705.871 kb on - strand at 1705.900 kb on + strand at 1705.900 kb on + strand at 1705.900 kb on + strand at 1705.900 kb on + strand at 1705.901 kb on - strand at 1705.901 kb on - strand at 1705.901 kb on - strand at 1705.917 kb on + strand, within CA264_07405 at 1705.918 kb on - strand, within CA264_07405 at 1705.936 kb on + strand, within CA264_07405 at 1705.957 kb on + strand, within CA264_07405 at 1705.975 kb on + strand, within CA264_07405 at 1705.975 kb on + strand, within CA264_07405 at 1706.026 kb on + strand, within CA264_07405 at 1706.083 kb on - strand, within CA264_07405 at 1706.083 kb on - strand, within CA264_07405 at 1706.094 kb on - strand, within CA264_07405 at 1706.095 kb on + strand, within CA264_07405 at 1706.122 kb on - strand, within CA264_07405 at 1706.123 kb on + strand, within CA264_07405 at 1706.124 kb on - strand, within CA264_07405 at 1706.127 kb on + strand, within CA264_07405 at 1706.127 kb on + strand, within CA264_07405 at 1706.128 kb on - strand, within CA264_07405 at 1706.195 kb on + strand, within CA264_07405 at 1706.197 kb on + strand, within CA264_07405 at 1706.197 kb on + strand, within CA264_07405 at 1706.281 kb on - strand, within CA264_07405 at 1706.344 kb on + strand, within CA264_07405 at 1706.344 kb on + strand, within CA264_07405 at 1706.344 kb on + strand, within CA264_07405 at 1706.398 kb on + strand, within CA264_07405 at 1706.399 kb on - strand, within CA264_07405 at 1706.401 kb on + strand, within CA264_07405 at 1706.401 kb on + strand, within CA264_07405 at 1706.401 kb on + strand, within CA264_07405 at 1706.402 kb on - strand, within CA264_07405 at 1706.402 kb on - strand, within CA264_07405 at 1706.486 kb on - strand, within CA264_07405 at 1706.486 kb on - strand, within CA264_07405 at 1706.487 kb on + strand, within CA264_07405 at 1706.524 kb on + strand, within CA264_07405 at 1706.525 kb on - strand, within CA264_07405 at 1706.601 kb on + strand, within CA264_07405 at 1706.710 kb on + strand, within CA264_07405 at 1706.711 kb on - strand, within CA264_07405 at 1706.711 kb on - strand, within CA264_07405 at 1706.869 kb on - strand at 1706.899 kb on + strand at 1706.902 kb on + strand at 1706.902 kb on + strand at 1706.976 kb on + strand at 1706.976 kb on + strand at 1707.047 kb on + strand at 1707.059 kb on - strand at 1707.059 kb on - strand at 1707.078 kb on + strand at 1707.079 kb on - strand at 1707.083 kb on + strand at 1707.190 kb on + strand, within CA264_07410 at 1707.190 kb on + strand, within CA264_07410 at 1707.191 kb on - strand, within CA264_07410 at 1707.212 kb on - strand, within CA264_07410 at 1707.214 kb on + strand, within CA264_07410 at 1707.224 kb on + strand, within CA264_07410 at 1707.355 kb on + strand, within CA264_07410 at 1707.355 kb on + strand, within CA264_07410 at 1707.371 kb on + strand, within CA264_07410 at 1707.539 kb on - strand, within CA264_07410 at 1707.584 kb on + strand, within CA264_07410 at 1707.628 kb on + strand, within CA264_07410 at 1707.629 kb on - strand, within CA264_07410 at 1707.652 kb on + strand, within CA264_07410 at 1707.653 kb on - strand, within CA264_07410 at 1707.653 kb on - strand, within CA264_07410 at 1707.653 kb on - strand, within CA264_07410 at 1707.675 kb on + strand, within CA264_07410 at 1707.710 kb on + strand, within CA264_07410 at 1707.710 kb on + strand, within CA264_07410 at 1707.712 kb on + strand, within CA264_07410 at 1707.712 kb on + strand, within CA264_07410 at 1707.824 kb on + strand at 1707.845 kb on + strand at 1707.849 kb on + strand at 1707.849 kb on + strand at 1707.849 kb on + strand at 1707.849 kb on + strand at 1707.850 kb on - strand at 1707.850 kb on - strand at 1707.862 kb on + strand at 1707.862 kb on + strand at 1707.862 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 1,705,799 + +1.0 1,705,799 + -0.0 1,705,834 - +0.3 1,705,870 + -0.2 1,705,871 - +0.4 1,705,900 + +0.2 1,705,900 + -1.2 1,705,900 + +0.1 1,705,900 + +0.6 1,705,901 - -0.5 1,705,901 - -0.5 1,705,901 - -0.9 1,705,917 + CA264_07405 0.10 -0.4 1,705,918 - CA264_07405 0.10 +0.0 1,705,936 + CA264_07405 0.12 +0.1 1,705,957 + CA264_07405 0.14 -0.4 1,705,975 + CA264_07405 0.16 +0.1 1,705,975 + CA264_07405 0.16 +0.0 1,706,026 + CA264_07405 0.20 -0.1 1,706,083 - CA264_07405 0.26 +0.7 1,706,083 - CA264_07405 0.26 +0.3 1,706,094 - CA264_07405 0.27 -0.8 1,706,095 + CA264_07405 0.27 -0.2 1,706,122 - CA264_07405 0.29 -0.8 1,706,123 + CA264_07405 0.29 +0.6 1,706,124 - CA264_07405 0.29 +0.2 1,706,127 + CA264_07405 0.30 -0.7 1,706,127 + CA264_07405 0.30 -0.5 1,706,128 - CA264_07405 0.30 +0.5 1,706,195 + CA264_07405 0.36 +0.5 1,706,197 + CA264_07405 0.36 +1.2 1,706,197 + CA264_07405 0.36 -1.8 1,706,281 - CA264_07405 0.44 -0.1 1,706,344 + CA264_07405 0.50 -0.2 1,706,344 + CA264_07405 0.50 -0.6 1,706,344 + CA264_07405 0.50 -0.1 1,706,398 + CA264_07405 0.55 -0.2 1,706,399 - CA264_07405 0.55 +0.5 1,706,401 + CA264_07405 0.55 +0.6 1,706,401 + CA264_07405 0.55 +0.3 1,706,401 + CA264_07405 0.55 +0.1 1,706,402 - CA264_07405 0.55 +0.5 1,706,402 - CA264_07405 0.55 -0.5 1,706,486 - CA264_07405 0.63 +0.6 1,706,486 - CA264_07405 0.63 -0.8 1,706,487 + CA264_07405 0.63 +0.5 1,706,524 + CA264_07405 0.66 +0.0 1,706,525 - CA264_07405 0.67 -0.7 1,706,601 + CA264_07405 0.74 -0.1 1,706,710 + CA264_07405 0.84 -2.3 1,706,711 - CA264_07405 0.84 +0.1 1,706,711 - CA264_07405 0.84 -0.2 1,706,869 - -0.4 1,706,899 + +0.1 1,706,902 + -0.4 1,706,902 + +0.0 1,706,976 + -0.3 1,706,976 + +0.3 1,707,047 + -0.7 1,707,059 - -0.0 1,707,059 - +2.8 1,707,078 + -0.1 1,707,079 - +1.2 1,707,083 + +0.1 1,707,190 + CA264_07410 0.17 +0.3 1,707,190 + CA264_07410 0.17 +0.2 1,707,191 - CA264_07410 0.17 +0.1 1,707,212 - CA264_07410 0.20 +0.3 1,707,214 + CA264_07410 0.20 -1.0 1,707,224 + CA264_07410 0.21 -0.9 1,707,355 + CA264_07410 0.38 +0.5 1,707,355 + CA264_07410 0.38 -0.2 1,707,371 + CA264_07410 0.40 -1.1 1,707,539 - CA264_07410 0.61 -0.5 1,707,584 + CA264_07410 0.67 +0.2 1,707,628 + CA264_07410 0.72 +2.2 1,707,629 - CA264_07410 0.72 -1.0 1,707,652 + CA264_07410 0.75 -0.2 1,707,653 - CA264_07410 0.76 -0.0 1,707,653 - CA264_07410 0.76 -0.3 1,707,653 - CA264_07410 0.76 -0.3 1,707,675 + CA264_07410 0.78 -0.5 1,707,710 + CA264_07410 0.83 +1.2 1,707,710 + CA264_07410 0.83 -0.3 1,707,712 + CA264_07410 0.83 -1.1 1,707,712 + CA264_07410 0.83 +0.1 1,707,824 + -0.1 1,707,845 + -0.5 1,707,849 + +0.5 1,707,849 + -0.2 1,707,849 + -0.4 1,707,849 + -0.4 1,707,850 - -0.9 1,707,850 - +0.8 1,707,862 + +0.5 1,707,862 + -0.5 1,707,862 + -0.4
Or see this region's nucleotide sequence