Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04925 and CA264_04930 are separated by 183 nucleotides CA264_04930 and CA264_04935 are separated by 232 nucleotides
CA264_04925: CA264_04925 - hypothetical protein, at 1,142,707 to 1,143,771
_04925
CA264_04930: CA264_04930 - DNA polymerase III subunit delta, at 1,143,955 to 1,145,001
_04930
CA264_04935: CA264_04935 - hypothetical protein, at 1,145,234 to 1,148,374
_04935
Position (kb)
1143
1144
1145
1146 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1143.006 kb on - strand, within CA264_04925 at 1143.006 kb on - strand, within CA264_04925 at 1143.023 kb on + strand, within CA264_04925 at 1143.024 kb on - strand, within CA264_04925 at 1143.158 kb on + strand, within CA264_04925 at 1143.158 kb on + strand, within CA264_04925 at 1143.161 kb on + strand, within CA264_04925 at 1143.162 kb on - strand, within CA264_04925 at 1143.192 kb on - strand, within CA264_04925 at 1143.211 kb on - strand, within CA264_04925 at 1143.261 kb on + strand, within CA264_04925 at 1143.433 kb on + strand, within CA264_04925 at 1143.487 kb on + strand, within CA264_04925 at 1143.531 kb on + strand, within CA264_04925 at 1143.542 kb on - strand, within CA264_04925 at 1143.542 kb on - strand, within CA264_04925 at 1143.588 kb on + strand, within CA264_04925 at 1143.628 kb on + strand, within CA264_04925 at 1143.641 kb on + strand, within CA264_04925 at 1143.641 kb on + strand, within CA264_04925 at 1143.641 kb on + strand, within CA264_04925 at 1143.642 kb on - strand, within CA264_04925 at 1143.642 kb on - strand, within CA264_04925 at 1143.733 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1143.779 kb on + strand at 1145.011 kb on + strand at 1145.015 kb on + strand at 1145.015 kb on + strand at 1145.016 kb on - strand at 1145.053 kb on + strand at 1145.054 kb on - strand at 1145.054 kb on - strand at 1145.054 kb on - strand at 1145.054 kb on - strand at 1145.055 kb on + strand at 1145.069 kb on + strand at 1145.069 kb on + strand at 1145.089 kb on - strand at 1145.129 kb on + strand at 1145.130 kb on - strand at 1145.178 kb on + strand at 1145.178 kb on + strand at 1145.179 kb on - strand at 1145.191 kb on - strand at 1145.229 kb on + strand at 1145.230 kb on - strand at 1145.234 kb on - strand at 1145.241 kb on + strand at 1145.923 kb on + strand, within CA264_04935
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 1,143,006 - CA264_04925 0.28 +1.9 1,143,006 - CA264_04925 0.28 +0.1 1,143,023 + CA264_04925 0.30 -0.2 1,143,024 - CA264_04925 0.30 -1.8 1,143,158 + CA264_04925 0.42 -0.7 1,143,158 + CA264_04925 0.42 +0.0 1,143,161 + CA264_04925 0.43 +0.0 1,143,162 - CA264_04925 0.43 +1.4 1,143,192 - CA264_04925 0.46 -0.7 1,143,211 - CA264_04925 0.47 +0.1 1,143,261 + CA264_04925 0.52 -1.9 1,143,433 + CA264_04925 0.68 -0.6 1,143,487 + CA264_04925 0.73 +1.5 1,143,531 + CA264_04925 0.77 -0.2 1,143,542 - CA264_04925 0.78 -0.6 1,143,542 - CA264_04925 0.78 +1.3 1,143,588 + CA264_04925 0.83 +1.0 1,143,628 + CA264_04925 0.86 -1.4 1,143,641 + CA264_04925 0.88 -0.5 1,143,641 + CA264_04925 0.88 -0.5 1,143,641 + CA264_04925 0.88 +1.2 1,143,642 - CA264_04925 0.88 -1.7 1,143,642 - CA264_04925 0.88 +1.5 1,143,733 + -1.1 1,143,779 + -0.3 1,143,779 + -0.1 1,143,779 + -0.3 1,143,779 + +1.1 1,143,779 + -1.8 1,145,011 + +0.1 1,145,015 + +0.7 1,145,015 + -0.3 1,145,016 - +0.1 1,145,053 + +0.2 1,145,054 - -0.8 1,145,054 - +0.3 1,145,054 - +0.4 1,145,054 - -1.3 1,145,055 + -0.2 1,145,069 + +0.3 1,145,069 + -0.2 1,145,089 - -1.0 1,145,129 + -0.1 1,145,130 - -0.2 1,145,178 + -1.5 1,145,178 + +1.2 1,145,179 - +0.9 1,145,191 - -0.4 1,145,229 + +0.7 1,145,230 - -0.3 1,145,234 - +1.4 1,145,241 + -1.7 1,145,923 + CA264_04935 0.22 -2.2
Or see this region's nucleotide sequence