Experiment: m.b. Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02720 and CA264_02725 are separated by 61 nucleotides CA264_02725 and CA264_02730 are separated by 39 nucleotides CA264_02730 and CA264_02735 are separated by 112 nucleotides CA264_02735 and CA264_02740 are separated by 327 nucleotides
CA264_02720: CA264_02720 - peroxiredoxin, at 627,467 to 627,955
_02720
CA264_02725: CA264_02725 - hypothetical protein, at 628,017 to 628,595
_02725
CA264_02730: CA264_02730 - hypothetical protein, at 628,635 to 629,600
_02730
CA264_02735: CA264_02735 - hypothetical protein, at 629,713 to 629,955
_02735
CA264_02740: CA264_02740 - hypothetical protein, at 630,283 to 631,668
_02740
Position (kb) 628
629
630 Strain fitness (log2 ratio) -2
-1
0
1
2 at 627.644 kb on + strand, within CA264_02720 at 627.679 kb on - strand, within CA264_02720 at 627.679 kb on - strand, within CA264_02720 at 627.728 kb on + strand, within CA264_02720 at 627.728 kb on + strand, within CA264_02720 at 627.728 kb on + strand, within CA264_02720 at 627.751 kb on + strand, within CA264_02720 at 627.758 kb on - strand, within CA264_02720 at 627.793 kb on + strand, within CA264_02720 at 627.827 kb on + strand, within CA264_02720 at 627.827 kb on + strand, within CA264_02720 at 627.828 kb on - strand, within CA264_02720 at 627.828 kb on - strand, within CA264_02720 at 627.828 kb on - strand, within CA264_02720 at 627.832 kb on + strand, within CA264_02720 at 627.832 kb on + strand, within CA264_02720 at 627.833 kb on - strand, within CA264_02720 at 627.858 kb on - strand, within CA264_02720 at 627.858 kb on - strand, within CA264_02720 at 627.865 kb on + strand, within CA264_02720 at 627.894 kb on + strand, within CA264_02720 at 627.895 kb on - strand, within CA264_02720 at 627.951 kb on + strand at 627.959 kb on - strand at 627.996 kb on + strand at 627.997 kb on - strand at 628.067 kb on - strand at 628.067 kb on - strand at 628.089 kb on - strand, within CA264_02725 at 628.089 kb on - strand, within CA264_02725 at 628.104 kb on + strand, within CA264_02725 at 628.105 kb on - strand, within CA264_02725 at 628.105 kb on - strand, within CA264_02725 at 628.142 kb on - strand, within CA264_02725 at 628.142 kb on - strand, within CA264_02725 at 628.153 kb on + strand, within CA264_02725 at 628.153 kb on + strand, within CA264_02725 at 628.154 kb on - strand, within CA264_02725 at 628.200 kb on + strand, within CA264_02725 at 628.201 kb on - strand, within CA264_02725 at 628.330 kb on - strand, within CA264_02725 at 628.400 kb on - strand, within CA264_02725 at 628.418 kb on - strand, within CA264_02725 at 628.457 kb on + strand, within CA264_02725 at 628.457 kb on + strand, within CA264_02725 at 628.457 kb on + strand, within CA264_02725 at 628.458 kb on - strand, within CA264_02725 at 628.500 kb on - strand, within CA264_02725 at 628.500 kb on - strand, within CA264_02725 at 628.573 kb on - strand at 628.580 kb on + strand at 628.581 kb on - strand at 628.581 kb on - strand at 628.581 kb on - strand at 628.611 kb on + strand at 628.611 kb on + strand at 628.612 kb on - strand at 628.614 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.621 kb on + strand at 628.656 kb on + strand at 628.656 kb on + strand at 628.778 kb on - strand, within CA264_02730 at 628.778 kb on - strand, within CA264_02730 at 628.810 kb on - strand, within CA264_02730 at 628.945 kb on + strand, within CA264_02730 at 628.951 kb on + strand, within CA264_02730 at 628.951 kb on + strand, within CA264_02730 at 628.951 kb on + strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 629.213 kb on - strand, within CA264_02730 at 629.283 kb on + strand, within CA264_02730 at 629.284 kb on - strand, within CA264_02730 at 629.405 kb on - strand, within CA264_02730 at 629.405 kb on - strand, within CA264_02730 at 629.452 kb on + strand, within CA264_02730 at 629.519 kb on + strand at 629.552 kb on + strand at 629.553 kb on - strand at 629.560 kb on - strand at 629.567 kb on + strand at 629.666 kb on - strand at 629.671 kb on - strand at 629.671 kb on - strand at 629.715 kb on - strand at 629.758 kb on - strand, within CA264_02735 at 629.765 kb on - strand, within CA264_02735 at 629.859 kb on - strand, within CA264_02735 at 629.862 kb on - strand, within CA264_02735 at 629.862 kb on - strand, within CA264_02735 at 629.862 kb on - strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.863 kb on + strand, within CA264_02735 at 629.864 kb on - strand, within CA264_02735 at 629.864 kb on - strand, within CA264_02735 at 629.864 kb on - strand, within CA264_02735 at 629.867 kb on + strand, within CA264_02735 at 629.868 kb on - strand, within CA264_02735 at 629.868 kb on - strand, within CA264_02735 at 629.934 kb on + strand at 629.934 kb on + strand at 629.934 kb on + strand at 629.935 kb on - strand at 629.938 kb on + strand at 629.939 kb on - strand at 629.939 kb on - strand at 629.945 kb on - strand at 629.967 kb on + strand at 629.968 kb on - strand at 629.975 kb on - strand at 629.975 kb on - strand at 629.982 kb on + strand at 629.983 kb on - strand at 629.990 kb on + strand at 629.991 kb on - strand at 630.009 kb on + strand at 630.010 kb on - strand at 630.013 kb on + strand at 630.014 kb on - strand at 630.014 kb on - strand at 630.023 kb on + strand at 630.031 kb on + strand at 630.250 kb on + strand at 630.251 kb on - strand at 630.252 kb on + strand at 630.252 kb on + strand at 630.252 kb on + strand at 630.252 kb on + strand at 630.252 kb on + strand at 630.253 kb on - strand at 630.253 kb on - strand at 630.253 kb on - strand at 630.255 kb on + strand at 630.255 kb on + strand at 630.255 kb on + strand at 630.256 kb on - strand at 630.285 kb on - strand at 630.330 kb on - strand at 630.330 kb on - strand at 630.341 kb on + strand at 630.390 kb on - strand at 630.393 kb on - strand at 630.396 kb on + strand at 630.409 kb on - strand at 630.504 kb on - strand, within CA264_02740
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0001 mg/ml remove 627,644 + CA264_02720 0.36 -0.6 627,679 - CA264_02720 0.43 +0.1 627,679 - CA264_02720 0.43 -0.1 627,728 + CA264_02720 0.53 +1.1 627,728 + CA264_02720 0.53 +0.2 627,728 + CA264_02720 0.53 -0.2 627,751 + CA264_02720 0.58 +0.3 627,758 - CA264_02720 0.60 +0.7 627,793 + CA264_02720 0.67 -0.3 627,827 + CA264_02720 0.74 +0.2 627,827 + CA264_02720 0.74 +0.0 627,828 - CA264_02720 0.74 -0.6 627,828 - CA264_02720 0.74 +0.1 627,828 - CA264_02720 0.74 -0.8 627,832 + CA264_02720 0.75 +0.5 627,832 + CA264_02720 0.75 +1.5 627,833 - CA264_02720 0.75 +0.5 627,858 - CA264_02720 0.80 -0.0 627,858 - CA264_02720 0.80 +1.3 627,865 + CA264_02720 0.81 +0.1 627,894 + CA264_02720 0.87 +0.7 627,895 - CA264_02720 0.88 -0.3 627,951 + -0.1 627,959 - +0.4 627,996 + -0.4 627,997 - -0.3 628,067 - -0.7 628,067 - -0.7 628,089 - CA264_02725 0.12 +2.3 628,089 - CA264_02725 0.12 -0.2 628,104 + CA264_02725 0.15 +0.3 628,105 - CA264_02725 0.15 +0.7 628,105 - CA264_02725 0.15 -0.1 628,142 - CA264_02725 0.22 -0.7 628,142 - CA264_02725 0.22 -0.4 628,153 + CA264_02725 0.23 +0.6 628,153 + CA264_02725 0.23 +0.2 628,154 - CA264_02725 0.24 +0.7 628,200 + CA264_02725 0.32 +0.3 628,201 - CA264_02725 0.32 -0.4 628,330 - CA264_02725 0.54 -0.1 628,400 - CA264_02725 0.66 +1.4 628,418 - CA264_02725 0.69 -2.1 628,457 + CA264_02725 0.76 +0.4 628,457 + CA264_02725 0.76 -0.3 628,457 + CA264_02725 0.76 +0.4 628,458 - CA264_02725 0.76 +0.5 628,500 - CA264_02725 0.83 -1.9 628,500 - CA264_02725 0.83 +0.4 628,573 - +0.1 628,580 + +1.3 628,581 - +0.4 628,581 - -0.9 628,581 - -0.4 628,611 + +0.1 628,611 + +0.2 628,612 - +0.5 628,614 + -0.0 628,619 + +0.3 628,619 + -0.2 628,619 + +0.5 628,619 + -0.7 628,619 + -0.2 628,620 - +0.2 628,620 - -0.2 628,620 - +0.2 628,620 - -0.1 628,620 - +0.4 628,620 - -0.7 628,621 + -0.6 628,656 + -0.6 628,656 + -0.2 628,778 - CA264_02730 0.15 +0.2 628,778 - CA264_02730 0.15 -0.7 628,810 - CA264_02730 0.18 -0.2 628,945 + CA264_02730 0.32 +0.3 628,951 + CA264_02730 0.33 -0.1 628,951 + CA264_02730 0.33 -0.3 628,951 + CA264_02730 0.33 +0.3 628,952 - CA264_02730 0.33 -0.2 628,952 - CA264_02730 0.33 -0.3 628,952 - CA264_02730 0.33 +0.1 628,952 - CA264_02730 0.33 +0.3 629,213 - CA264_02730 0.60 +0.6 629,283 + CA264_02730 0.67 -0.1 629,284 - CA264_02730 0.67 -0.6 629,405 - CA264_02730 0.80 +0.8 629,405 - CA264_02730 0.80 -0.3 629,452 + CA264_02730 0.85 -0.0 629,519 + +0.7 629,552 + +0.6 629,553 - -0.0 629,560 - -0.2 629,567 + +0.1 629,666 - +0.0 629,671 - -0.7 629,671 - -0.2 629,715 - +0.4 629,758 - CA264_02735 0.19 +0.6 629,765 - CA264_02735 0.21 +0.3 629,859 - CA264_02735 0.60 +0.0 629,862 - CA264_02735 0.61 -1.2 629,862 - CA264_02735 0.61 -0.2 629,862 - CA264_02735 0.61 +0.6 629,863 + CA264_02735 0.62 -0.6 629,863 + CA264_02735 0.62 -0.6 629,863 + CA264_02735 0.62 -1.3 629,863 + CA264_02735 0.62 +0.6 629,863 + CA264_02735 0.62 -0.5 629,863 + CA264_02735 0.62 +1.1 629,863 + CA264_02735 0.62 -0.8 629,863 + CA264_02735 0.62 +0.4 629,863 + CA264_02735 0.62 -0.3 629,863 + CA264_02735 0.62 -0.0 629,864 - CA264_02735 0.62 -0.8 629,864 - CA264_02735 0.62 -1.0 629,864 - CA264_02735 0.62 +0.6 629,867 + CA264_02735 0.63 -0.2 629,868 - CA264_02735 0.64 +0.2 629,868 - CA264_02735 0.64 -0.5 629,934 + -0.1 629,934 + -0.1 629,934 + +1.0 629,935 - +0.3 629,938 + +0.3 629,939 - -0.1 629,939 - -0.7 629,945 - -0.1 629,967 + -0.1 629,968 - +1.3 629,975 - -0.1 629,975 - +1.0 629,982 + -0.2 629,983 - -0.6 629,990 + +0.7 629,991 - -0.1 630,009 + -1.4 630,010 - -0.8 630,013 + -1.4 630,014 - -1.1 630,014 - +0.4 630,023 + -1.3 630,031 + -0.6 630,250 + +0.6 630,251 - -0.7 630,252 + -0.4 630,252 + -0.9 630,252 + -0.3 630,252 + -0.2 630,252 + +0.3 630,253 - +0.1 630,253 - +0.2 630,253 - +1.1 630,255 + -2.0 630,255 + -0.1 630,255 + -1.8 630,256 - +0.3 630,285 - -0.3 630,330 - -0.1 630,330 - -0.3 630,341 + -0.3 630,390 - -0.4 630,393 - +1.1 630,396 + -0.3 630,409 - +2.5 630,504 - CA264_02740 0.16 +0.3
Or see this region's nucleotide sequence