Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5072 and Atu5073 are separated by 3 nucleotides Atu5073 and Atu5074 overlap by 4 nucleotides Atu5074 and Atu5075 are separated by 60 nucleotides Atu5075 and Atu5076 are separated by 3 nucleotides
Atu5072: Atu5072 - hypothetical protein, at 71,901 to 73,091
Atu5072
Atu5073: Atu5073 - pyridoxal phosphate biosynthesis protein, at 73,095 to 74,060
Atu5073
Atu5074: Atu5074 - iron alcohol dehydrogenase, at 74,057 to 75,178
Atu5074
Atu5075: Atu5075 - GntR family transcriptional regulator, at 75,239 to 75,943
Atu5075
Atu5076: Atu5076 - hypothetical protein, at 75,947 to 76,975
Atu5076
Position (kb) 74
75
76 Strain fitness (log2 ratio) -1
0
1
2 at 73.123 kb on - strand at 73.129 kb on - strand at 73.222 kb on + strand, within Atu5073 at 73.222 kb on - strand, within Atu5073 at 73.224 kb on - strand, within Atu5073 at 73.312 kb on + strand, within Atu5073 at 73.320 kb on - strand, within Atu5073 at 73.396 kb on + strand, within Atu5073 at 73.396 kb on + strand, within Atu5073 at 73.478 kb on - strand, within Atu5073 at 73.484 kb on + strand, within Atu5073 at 73.526 kb on + strand, within Atu5073 at 73.532 kb on + strand, within Atu5073 at 73.532 kb on + strand, within Atu5073 at 73.542 kb on - strand, within Atu5073 at 73.585 kb on + strand, within Atu5073 at 73.616 kb on + strand, within Atu5073 at 73.649 kb on - strand, within Atu5073 at 73.649 kb on - strand, within Atu5073 at 73.713 kb on + strand, within Atu5073 at 73.784 kb on - strand, within Atu5073 at 73.805 kb on - strand, within Atu5073 at 73.822 kb on + strand, within Atu5073 at 73.827 kb on + strand, within Atu5073 at 73.832 kb on + strand, within Atu5073 at 73.893 kb on + strand, within Atu5073 at 73.911 kb on + strand, within Atu5073 at 73.950 kb on + strand, within Atu5073 at 73.958 kb on - strand, within Atu5073 at 73.958 kb on - strand, within Atu5073 at 73.958 kb on - strand, within Atu5073 at 73.965 kb on + strand at 74.054 kb on + strand at 74.088 kb on + strand at 74.149 kb on + strand at 74.164 kb on + strand at 74.238 kb on - strand, within Atu5074 at 74.244 kb on - strand, within Atu5074 at 74.250 kb on + strand, within Atu5074 at 74.393 kb on - strand, within Atu5074 at 74.402 kb on + strand, within Atu5074 at 74.410 kb on - strand, within Atu5074 at 74.435 kb on - strand, within Atu5074 at 74.558 kb on + strand, within Atu5074 at 74.583 kb on - strand, within Atu5074 at 74.596 kb on + strand, within Atu5074 at 74.635 kb on + strand, within Atu5074 at 74.642 kb on - strand, within Atu5074 at 74.650 kb on - strand, within Atu5074 at 74.693 kb on + strand, within Atu5074 at 74.693 kb on + strand, within Atu5074 at 74.693 kb on + strand, within Atu5074 at 74.729 kb on + strand, within Atu5074 at 74.737 kb on - strand, within Atu5074 at 74.737 kb on - strand, within Atu5074 at 74.762 kb on + strand, within Atu5074 at 74.804 kb on - strand, within Atu5074 at 74.804 kb on - strand, within Atu5074 at 74.804 kb on - strand, within Atu5074 at 74.806 kb on + strand, within Atu5074 at 74.852 kb on + strand, within Atu5074 at 74.860 kb on - strand, within Atu5074 at 74.860 kb on - strand, within Atu5074 at 74.917 kb on + strand, within Atu5074 at 74.967 kb on + strand, within Atu5074 at 74.972 kb on + strand, within Atu5074 at 74.995 kb on - strand, within Atu5074 at 75.084 kb on - strand at 75.086 kb on + strand at 75.180 kb on - strand at 75.183 kb on + strand at 75.183 kb on + strand at 75.204 kb on - strand at 75.204 kb on - strand at 75.322 kb on - strand, within Atu5075 at 75.368 kb on + strand, within Atu5075 at 75.376 kb on - strand, within Atu5075 at 75.392 kb on + strand, within Atu5075 at 75.400 kb on - strand, within Atu5075 at 75.467 kb on + strand, within Atu5075 at 75.469 kb on + strand, within Atu5075 at 75.472 kb on + strand, within Atu5075 at 75.545 kb on + strand, within Atu5075 at 75.574 kb on + strand, within Atu5075 at 75.606 kb on - strand, within Atu5075 at 75.765 kb on + strand, within Atu5075 at 75.771 kb on + strand, within Atu5075 at 75.797 kb on + strand, within Atu5075 at 75.805 kb on + strand, within Atu5075 at 75.812 kb on - strand, within Atu5075 at 75.918 kb on - strand at 76.008 kb on - strand at 76.065 kb on - strand, within Atu5076 at 76.074 kb on - strand, within Atu5076 at 76.090 kb on + strand, within Atu5076 at 76.096 kb on + strand, within Atu5076 at 76.102 kb on + strand, within Atu5076 at 76.102 kb on + strand, within Atu5076 at 76.110 kb on - strand, within Atu5076 at 76.114 kb on - strand, within Atu5076 at 76.139 kb on + strand, within Atu5076 at 76.175 kb on + strand, within Atu5076
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 73,123 - +0.7 73,129 - +2.2 73,222 + Atu5073 0.13 +0.2 73,222 - Atu5073 0.13 +0.2 73,224 - Atu5073 0.13 -0.9 73,312 + Atu5073 0.22 +0.9 73,320 - Atu5073 0.23 +0.1 73,396 + Atu5073 0.31 -1.1 73,396 + Atu5073 0.31 +1.2 73,478 - Atu5073 0.40 +0.6 73,484 + Atu5073 0.40 +1.4 73,526 + Atu5073 0.45 +0.3 73,532 + Atu5073 0.45 +0.5 73,532 + Atu5073 0.45 +0.1 73,542 - Atu5073 0.46 +0.2 73,585 + Atu5073 0.51 +1.2 73,616 + Atu5073 0.54 -0.1 73,649 - Atu5073 0.57 +0.0 73,649 - Atu5073 0.57 +0.3 73,713 + Atu5073 0.64 -0.3 73,784 - Atu5073 0.71 +0.6 73,805 - Atu5073 0.73 -0.1 73,822 + Atu5073 0.75 -0.5 73,827 + Atu5073 0.76 +0.1 73,832 + Atu5073 0.76 +1.5 73,893 + Atu5073 0.83 +0.2 73,911 + Atu5073 0.84 +1.2 73,950 + Atu5073 0.89 +0.6 73,958 - Atu5073 0.89 +0.3 73,958 - Atu5073 0.89 +0.3 73,958 - Atu5073 0.89 -0.6 73,965 + +1.2 74,054 + +0.1 74,088 + -0.3 74,149 + +1.2 74,164 + +2.4 74,238 - Atu5074 0.16 -1.1 74,244 - Atu5074 0.17 +0.5 74,250 + Atu5074 0.17 +0.4 74,393 - Atu5074 0.30 +0.6 74,402 + Atu5074 0.31 -0.2 74,410 - Atu5074 0.31 -0.7 74,435 - Atu5074 0.34 +1.8 74,558 + Atu5074 0.45 -1.0 74,583 - Atu5074 0.47 -0.7 74,596 + Atu5074 0.48 +0.0 74,635 + Atu5074 0.52 +2.6 74,642 - Atu5074 0.52 +0.4 74,650 - Atu5074 0.53 -0.1 74,693 + Atu5074 0.57 -0.7 74,693 + Atu5074 0.57 +0.3 74,693 + Atu5074 0.57 -0.9 74,729 + Atu5074 0.60 +1.2 74,737 - Atu5074 0.61 +0.1 74,737 - Atu5074 0.61 -1.0 74,762 + Atu5074 0.63 +0.5 74,804 - Atu5074 0.67 +0.7 74,804 - Atu5074 0.67 +0.2 74,804 - Atu5074 0.67 +0.5 74,806 + Atu5074 0.67 +0.2 74,852 + Atu5074 0.71 +0.7 74,860 - Atu5074 0.72 -0.2 74,860 - Atu5074 0.72 -0.4 74,917 + Atu5074 0.77 +0.7 74,967 + Atu5074 0.81 +0.3 74,972 + Atu5074 0.82 +0.1 74,995 - Atu5074 0.84 -0.7 75,084 - -0.9 75,086 + +0.2 75,180 - -0.7 75,183 + +1.8 75,183 + -0.0 75,204 - +0.3 75,204 - -0.3 75,322 - Atu5075 0.12 -1.0 75,368 + Atu5075 0.18 -0.0 75,376 - Atu5075 0.19 +0.7 75,392 + Atu5075 0.22 -0.3 75,400 - Atu5075 0.23 -0.1 75,467 + Atu5075 0.32 +0.2 75,469 + Atu5075 0.33 +2.6 75,472 + Atu5075 0.33 +0.4 75,545 + Atu5075 0.43 -0.2 75,574 + Atu5075 0.48 -0.4 75,606 - Atu5075 0.52 +1.1 75,765 + Atu5075 0.75 +1.1 75,771 + Atu5075 0.75 +0.6 75,797 + Atu5075 0.79 +0.1 75,805 + Atu5075 0.80 -0.1 75,812 - Atu5075 0.81 +0.9 75,918 - -0.2 76,008 - +1.1 76,065 - Atu5076 0.11 -0.1 76,074 - Atu5076 0.12 +0.3 76,090 + Atu5076 0.14 +0.1 76,096 + Atu5076 0.14 +0.9 76,102 + Atu5076 0.15 +0.6 76,102 + Atu5076 0.15 +0.8 76,110 - Atu5076 0.16 +0.8 76,114 - Atu5076 0.16 -0.4 76,139 + Atu5076 0.19 +0.2 76,175 + Atu5076 0.22 -1.5
Or see this region's nucleotide sequence