Strain Fitness in Pseudomonas simiae WCS417 around PS417_14690

Experiment: Chloramphenicol 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.015 mg/ml
3,207,108	+		PS417_14680	0.82	+0.1
3,207,185	+				+0.9
3,207,185	+				-1.2
3,207,185	+				+0.2
3,207,186	-				+0.9
3,207,574	+				-0.5
3,207,575	-				+0.2
3,207,610	+				-0.0
3,207,653	+				+0.9
3,207,697	-				+0.4
3,207,802	-				-0.6
3,207,854	-				-1.2
3,207,924	+				-0.3
3,207,925	-				-1.2
3,207,925	-				-0.8
3,207,925	-				+0.7
3,207,925	-				-0.5
3,207,928	+				+0.1
3,207,928	+				+1.4
3,207,929	-				+0.2
3,207,929	-				+2.2
3,207,971	+				-1.6
3,207,972	-				+0.1
3,207,972	-				-0.0
3,208,020	-				-0.3
3,208,077	-				+0.2
3,208,193	-		PS417_14690	0.13	+0.1
3,208,203	+		PS417_14690	0.14	+1.4
3,208,370	+		PS417_14690	0.24	+0.3
3,208,461	+		PS417_14690	0.29	+0.6
3,208,549	+		PS417_14690	0.35	+0.5
3,208,550	+		PS417_14690	0.35	+0.6
3,208,551	-		PS417_14690	0.35	+0.2
3,208,602	+		PS417_14690	0.38	+0.0
3,208,619	+		PS417_14690	0.39	+0.4
3,208,620	-		PS417_14690	0.39	+1.1
3,208,620	-				-1.6
3,208,803	+				+1.0
3,209,338	+		PS417_14690	0.82	+0.3
3,209,338	+		PS417_14690	0.82	-0.1
3,209,339	-		PS417_14690	0.82	+0.4
3,209,339	-		PS417_14690	0.82	+0.4
3,209,416	-		PS417_14690	0.87	+1.2
3,209,704	-				+1.3
3,209,704	-				-1.2
3,209,704	-				+0.8
3,209,845	+				-0.8
3,209,888	-				-0.0
3,209,919	-				+0.4
3,210,051	-				-0.9
3,210,113	+				+0.3
3,210,150	+				-1.2
3,210,150	+				-0.2
3,210,161	+				+0.0
3,210,224	+				+0.3
3,210,344	+				+0.3
3,210,375	-				-0.5
3,210,375	-				+0.8
3,210,375	-				-0.1
3,210,380	+				-1.2
3,210,381	-				+0.4
3,210,426	+				+0.4
3,210,439	-				-1.6
3,210,531	+		PS417_14695	0.22	+0.4
3,210,531	+		PS417_14695	0.22	+0.9
3,210,532	-		PS417_14695	0.22	-0.6
3,210,532	-		PS417_14695	0.22	-0.1