Strain Fitness in Pseudomonas simiae WCS417 around PS417_06555

Experiment: Chloramphenicol 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.015 mg/ml
1,452,163	+				-0.4
1,452,164	-		PS417_06550	0.25	-0.7
1,452,247	+		PS417_06550	0.32	+0.8
1,452,289	+		PS417_06550	0.36	-0.3
1,452,289	+		PS417_06550	0.36	-0.0
1,452,290	-		PS417_06550	0.36	+0.6
1,452,290	-		PS417_06550	0.36	-0.2
1,452,493	+		PS417_06550	0.55	+0.4
1,452,494	-		PS417_06550	0.55	-0.7
1,452,494	-		PS417_06550	0.55	-0.2
1,452,497	+		PS417_06550	0.55	-0.4
1,452,497	+		PS417_06550	0.55	-0.3
1,452,497	+		PS417_06550	0.55	+1.9
1,452,497	+		PS417_06550	0.55	-0.7
1,452,498	-		PS417_06550	0.55	+0.3
1,452,498	-		PS417_06550	0.55	-0.9
1,452,498	-		PS417_06550	0.55	+1.9
1,452,498	-		PS417_06550	0.55	-0.7
1,452,498	-		PS417_06550	0.55	+0.1
1,452,498	-		PS417_06550	0.55	-0.1
1,452,498	-		PS417_06550	0.55	+0.2
1,452,566	-		PS417_06550	0.61	+2.2
1,452,712	+		PS417_06550	0.75	+0.3
1,452,713	-		PS417_06550	0.75	+0.2
1,452,865	+		PS417_06550	0.89	+0.5
1,452,865	+		PS417_06550	0.89	-0.1
1,452,866	-		PS417_06550	0.89	-0.0
1,452,866	-		PS417_06550	0.89	+0.3
1,452,868	+		PS417_06550	0.89	-0.5
1,452,966	+				+1.2
1,452,986	-				+0.6
1,452,993	+				+0.2
1,452,993	+				-1.1
1,452,994	-				-1.9
1,452,994	-				+0.2
1,453,018	-				-0.1
1,453,018	-				+0.4
1,453,204	+		PS417_06555	0.11	-0.9
1,453,246	-		PS417_06555	0.13	+0.8
1,453,351	-		PS417_06555	0.20	-0.2
1,453,428	+		PS417_06555	0.25	+0.0
1,453,449	+		PS417_06555	0.26	-0.7
1,453,449	+		PS417_06555	0.26	-0.6
1,453,450	-		PS417_06555	0.26	-0.9
1,453,450	-		PS417_06555	0.26	-0.1
1,453,450	-		PS417_06555	0.26	-1.1
1,453,450	-		PS417_06555	0.26	-0.3
1,453,507	-		PS417_06555	0.29	-1.1
1,453,653	+		PS417_06555	0.39	+0.6
1,453,654	-		PS417_06555	0.39	+0.1
1,453,654	-		PS417_06555	0.39	-0.6
1,453,692	+		PS417_06555	0.41	-0.1
1,453,692	+				+1.9
1,453,692	+		PS417_06555	0.41	-0.3
1,453,806	+		PS417_06555	0.48	-0.7
1,453,806	+		PS417_06555	0.48	-1.0
1,453,806	+		PS417_06555	0.48	+0.3
1,453,806	+		PS417_06555	0.48	+0.4
1,453,806	+		PS417_06555	0.48	+0.1
1,453,807	-		PS417_06555	0.48	-1.7
1,454,007	-		PS417_06555	0.60	-0.3
1,454,007	-		PS417_06555	0.60	+1.4
1,454,030	-		PS417_06555	0.62	-0.7
1,454,030	-		PS417_06555	0.62	-0.8
1,454,030	-		PS417_06555	0.62	+0.1
1,454,052	+		PS417_06555	0.63	-0.5
1,454,249	+		PS417_06555	0.75	+0.9
1,454,250	-		PS417_06555	0.76	+0.6
1,454,388	+		PS417_06555	0.84	-0.6
1,454,389	-		PS417_06555	0.84	+0.7
1,454,389	-		PS417_06555	0.84	-0.9
1,454,458	+		PS417_06555	0.88	-2.3
1,454,479	-		PS417_06555	0.90	-1.0
1,454,518	-				+0.2
1,454,521	+				-0.1
1,454,521	+				+1.1
1,454,522	-				+0.5
1,454,522	-				+0.5
1,454,639	+				-0.5
1,454,700	+				+2.7
1,454,700	+				+0.3
1,454,700	+				-0.3
1,454,701	-				+0.0
1,454,702	+				-0.1
1,454,703	-				-0.1
1,454,703	-				-0.1
1,454,732	-				+2.2
1,454,947	+		PS417_06560	0.29	-0.2
1,454,948	-		PS417_06560	0.29	-0.1
1,455,101	-		PS417_06560	0.52	-0.0
1,455,247	+		PS417_06560	0.74	-1.4
1,455,247	+		PS417_06560	0.74	-0.3
1,455,247	+		PS417_06560	0.74	+0.9
1,455,248	-		PS417_06560	0.74	-0.1
1,455,248	-		PS417_06560	0.74	+1.2
1,455,396	+				+0.9
1,455,396	+				-0.7
1,455,530	+				-0.8
1,455,607	+		PS417_06565	0.15	-0.1
1,455,619	+		PS417_06565	0.17	+0.0
1,455,628	+		PS417_06565	0.18	-0.3
1,455,628	+		PS417_06565	0.18	+0.3
1,455,629	-		PS417_06565	0.18	+0.9