Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4506 and Echvi_4507 are separated by 10 nucleotides Echvi_4507 and Echvi_4508 overlap by 4 nucleotides
Echvi_4506: Echvi_4506 - Gluconolactonase, at 5,382,391 to 5,383,494
_4506
Echvi_4507: Echvi_4507 - hypothetical protein, at 5,383,505 to 5,383,915
_4507
Echvi_4508: Echvi_4508 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 5,383,912 to 5,384,931
_4508
Position (kb)
5383
5384 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5382.506 kb on - strand, within Echvi_4506 at 5382.551 kb on + strand, within Echvi_4506 at 5382.552 kb on - strand, within Echvi_4506 at 5382.671 kb on + strand, within Echvi_4506 at 5382.908 kb on - strand, within Echvi_4506 at 5383.109 kb on - strand, within Echvi_4506 at 5383.114 kb on + strand, within Echvi_4506 at 5383.114 kb on + strand, within Echvi_4506 at 5383.142 kb on + strand, within Echvi_4506 at 5383.142 kb on + strand, within Echvi_4506 at 5383.162 kb on + strand, within Echvi_4506 at 5383.163 kb on - strand, within Echvi_4506 at 5383.284 kb on + strand, within Echvi_4506 at 5383.284 kb on + strand, within Echvi_4506 at 5383.284 kb on + strand, within Echvi_4506 at 5383.284 kb on + strand, within Echvi_4506 at 5383.285 kb on - strand, within Echvi_4506 at 5383.303 kb on + strand, within Echvi_4506 at 5383.304 kb on - strand, within Echvi_4506 at 5383.304 kb on - strand, within Echvi_4506 at 5383.330 kb on - strand, within Echvi_4506 at 5383.337 kb on + strand, within Echvi_4506 at 5383.390 kb on + strand at 5383.465 kb on + strand at 5383.474 kb on + strand at 5383.475 kb on - strand at 5383.475 kb on - strand at 5383.475 kb on - strand at 5383.530 kb on + strand at 5383.530 kb on + strand at 5383.531 kb on - strand at 5383.531 kb on - strand at 5383.531 kb on - strand at 5383.603 kb on + strand, within Echvi_4507 at 5383.604 kb on - strand, within Echvi_4507 at 5383.604 kb on - strand, within Echvi_4507 at 5383.780 kb on + strand, within Echvi_4507 at 5383.781 kb on - strand, within Echvi_4507 at 5383.804 kb on + strand, within Echvi_4507 at 5383.805 kb on - strand, within Echvi_4507 at 5383.805 kb on - strand, within Echvi_4507 at 5383.846 kb on + strand, within Echvi_4507 at 5383.847 kb on - strand, within Echvi_4507 at 5383.993 kb on - strand at 5383.994 kb on + strand at 5383.995 kb on - strand at 5383.995 kb on - strand at 5384.008 kb on + strand at 5384.009 kb on - strand at 5384.075 kb on - strand, within Echvi_4508 at 5384.075 kb on - strand, within Echvi_4508 at 5384.076 kb on + strand, within Echvi_4508 at 5384.077 kb on - strand, within Echvi_4508 at 5384.186 kb on + strand, within Echvi_4508 at 5384.186 kb on + strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.187 kb on - strand, within Echvi_4508 at 5384.275 kb on - strand, within Echvi_4508 at 5384.299 kb on - strand, within Echvi_4508 at 5384.374 kb on - strand, within Echvi_4508 at 5384.382 kb on + strand, within Echvi_4508 at 5384.393 kb on - strand, within Echvi_4508 at 5384.464 kb on + strand, within Echvi_4508 at 5384.465 kb on - strand, within Echvi_4508 at 5384.509 kb on + strand, within Echvi_4508 at 5384.527 kb on + strand, within Echvi_4508 at 5384.528 kb on - strand, within Echvi_4508 at 5384.542 kb on + strand, within Echvi_4508 at 5384.542 kb on + strand, within Echvi_4508 at 5384.584 kb on + strand, within Echvi_4508 at 5384.585 kb on - strand, within Echvi_4508 at 5384.681 kb on - strand, within Echvi_4508 at 5384.681 kb on - strand, within Echvi_4508 at 5384.759 kb on + strand, within Echvi_4508 at 5384.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 5,382,506 - Echvi_4506 0.10 -0.6 5,382,551 + Echvi_4506 0.14 -0.3 5,382,552 - Echvi_4506 0.15 +0.8 5,382,671 + Echvi_4506 0.25 -1.9 5,382,908 - Echvi_4506 0.47 -0.6 5,383,109 - Echvi_4506 0.65 -1.9 5,383,114 + Echvi_4506 0.65 -1.8 5,383,114 + Echvi_4506 0.65 +0.1 5,383,142 + Echvi_4506 0.68 +0.8 5,383,142 + Echvi_4506 0.68 -0.1 5,383,162 + Echvi_4506 0.70 +1.0 5,383,163 - Echvi_4506 0.70 -0.2 5,383,284 + Echvi_4506 0.81 +0.3 5,383,284 + Echvi_4506 0.81 +0.3 5,383,284 + Echvi_4506 0.81 +0.8 5,383,284 + Echvi_4506 0.81 +0.4 5,383,285 - Echvi_4506 0.81 +0.5 5,383,303 + Echvi_4506 0.83 -0.5 5,383,304 - Echvi_4506 0.83 -0.3 5,383,304 - Echvi_4506 0.83 +1.5 5,383,330 - Echvi_4506 0.85 +0.5 5,383,337 + Echvi_4506 0.86 -0.5 5,383,390 + -0.3 5,383,465 + +0.2 5,383,474 + -0.2 5,383,475 - +1.5 5,383,475 - +0.2 5,383,475 - +0.4 5,383,530 + +0.8 5,383,530 + -0.2 5,383,531 - -0.6 5,383,531 - +0.1 5,383,531 - -0.2 5,383,603 + Echvi_4507 0.24 -0.5 5,383,604 - Echvi_4507 0.24 -1.0 5,383,604 - Echvi_4507 0.24 -1.1 5,383,780 + Echvi_4507 0.67 -0.0 5,383,781 - Echvi_4507 0.67 -1.0 5,383,804 + Echvi_4507 0.73 +0.5 5,383,805 - Echvi_4507 0.73 -0.5 5,383,805 - Echvi_4507 0.73 -0.4 5,383,846 + Echvi_4507 0.83 -1.6 5,383,847 - Echvi_4507 0.83 -0.6 5,383,993 - -0.6 5,383,994 + +0.7 5,383,995 - -0.1 5,383,995 - +0.3 5,384,008 + -1.7 5,384,009 - +1.0 5,384,075 - Echvi_4508 0.16 -0.1 5,384,075 - Echvi_4508 0.16 -0.4 5,384,076 + Echvi_4508 0.16 -0.5 5,384,077 - Echvi_4508 0.16 -0.6 5,384,186 + Echvi_4508 0.27 -0.0 5,384,186 + Echvi_4508 0.27 +1.3 5,384,187 - Echvi_4508 0.27 +1.8 5,384,187 - Echvi_4508 0.27 -0.3 5,384,187 - Echvi_4508 0.27 -0.2 5,384,187 - Echvi_4508 0.27 -0.9 5,384,275 - Echvi_4508 0.36 +0.2 5,384,299 - Echvi_4508 0.38 +0.7 5,384,374 - Echvi_4508 0.45 -0.5 5,384,382 + Echvi_4508 0.46 -2.3 5,384,393 - Echvi_4508 0.47 +0.4 5,384,464 + Echvi_4508 0.54 +0.1 5,384,465 - Echvi_4508 0.54 +1.7 5,384,509 + Echvi_4508 0.59 +0.6 5,384,527 + Echvi_4508 0.60 -0.1 5,384,528 - Echvi_4508 0.60 +1.0 5,384,542 + Echvi_4508 0.62 -1.2 5,384,542 + Echvi_4508 0.62 +0.3 5,384,584 + Echvi_4508 0.66 -1.0 5,384,585 - Echvi_4508 0.66 +0.8 5,384,681 - Echvi_4508 0.75 +0.3 5,384,681 - Echvi_4508 0.75 +1.3 5,384,759 + Echvi_4508 0.83 -0.8 5,384,844 - -1.3
Or see this region's nucleotide sequence