Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4426 and Echvi_4427 are separated by 3 nucleotides Echvi_4427 and Echvi_4428 are separated by 517 nucleotides
Echvi_4426: Echvi_4426 - Outer membrane protein, at 5,293,756 to 5,295,111
_4426
Echvi_4427: Echvi_4427 - Transcriptional regulator, at 5,295,115 to 5,295,720
_4427
Echvi_4428: Echvi_4428 - Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain, at 5,296,238 to 5,299,924
_4428
Position (kb)
5295
5296 Strain fitness (log2 ratio)
-2
-1
0
1 at 5294.124 kb on + strand, within Echvi_4426 at 5294.124 kb on + strand, within Echvi_4426 at 5294.124 kb on + strand, within Echvi_4426 at 5294.124 kb on + strand, within Echvi_4426 at 5294.125 kb on - strand, within Echvi_4426 at 5294.125 kb on - strand, within Echvi_4426 at 5294.125 kb on - strand, within Echvi_4426 at 5294.145 kb on + strand, within Echvi_4426 at 5294.205 kb on - strand, within Echvi_4426 at 5294.234 kb on + strand, within Echvi_4426 at 5294.267 kb on - strand, within Echvi_4426 at 5294.329 kb on + strand, within Echvi_4426 at 5294.329 kb on + strand, within Echvi_4426 at 5294.484 kb on - strand, within Echvi_4426 at 5294.697 kb on - strand, within Echvi_4426 at 5294.778 kb on - strand, within Echvi_4426 at 5295.016 kb on + strand at 5295.135 kb on + strand at 5295.137 kb on + strand at 5295.168 kb on + strand at 5295.168 kb on + strand at 5295.168 kb on + strand at 5295.168 kb on + strand at 5295.202 kb on + strand, within Echvi_4427 at 5295.211 kb on + strand, within Echvi_4427 at 5295.315 kb on + strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.447 kb on - strand, within Echvi_4427 at 5295.468 kb on - strand, within Echvi_4427 at 5295.558 kb on + strand, within Echvi_4427 at 5295.602 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.700 kb on + strand at 5295.701 kb on - strand at 5295.962 kb on + strand at 5295.994 kb on + strand at 5296.088 kb on + strand at 5296.093 kb on - strand at 5296.156 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 5,294,124 + Echvi_4426 0.27 +1.0 5,294,124 + Echvi_4426 0.27 +0.0 5,294,124 + Echvi_4426 0.27 +0.4 5,294,124 + Echvi_4426 0.27 -0.4 5,294,125 - Echvi_4426 0.27 -0.2 5,294,125 - Echvi_4426 0.27 -0.6 5,294,125 - Echvi_4426 0.27 -1.0 5,294,145 + Echvi_4426 0.29 -0.3 5,294,205 - Echvi_4426 0.33 +0.0 5,294,234 + Echvi_4426 0.35 +0.6 5,294,267 - Echvi_4426 0.38 -0.9 5,294,329 + Echvi_4426 0.42 +0.2 5,294,329 + Echvi_4426 0.42 +0.2 5,294,484 - Echvi_4426 0.54 +0.4 5,294,697 - Echvi_4426 0.69 -0.3 5,294,778 - Echvi_4426 0.75 -1.3 5,295,016 + -0.3 5,295,135 + +0.7 5,295,137 + +0.9 5,295,168 + -0.0 5,295,168 + -0.5 5,295,168 + +0.5 5,295,168 + +0.1 5,295,202 + Echvi_4427 0.14 +1.0 5,295,211 + Echvi_4427 0.16 -1.6 5,295,315 + Echvi_4427 0.33 -0.4 5,295,316 - Echvi_4427 0.33 +0.5 5,295,316 - Echvi_4427 0.33 -1.0 5,295,316 - Echvi_4427 0.33 -0.5 5,295,447 - Echvi_4427 0.55 -0.8 5,295,468 - Echvi_4427 0.58 +0.4 5,295,558 + Echvi_4427 0.73 +0.4 5,295,602 + Echvi_4427 0.80 -1.4 5,295,656 + Echvi_4427 0.89 -1.6 5,295,656 + Echvi_4427 0.89 -0.4 5,295,656 + Echvi_4427 0.89 -0.8 5,295,656 + Echvi_4427 0.89 +0.2 5,295,656 + Echvi_4427 0.89 -0.0 5,295,656 + Echvi_4427 0.89 -0.7 5,295,656 + Echvi_4427 0.89 -0.6 5,295,656 + Echvi_4427 0.89 -1.6 5,295,656 + Echvi_4427 0.89 -0.5 5,295,656 + Echvi_4427 0.89 +0.2 5,295,656 + Echvi_4427 0.89 -0.9 5,295,657 - Echvi_4427 0.89 -1.0 5,295,657 - Echvi_4427 0.89 +0.2 5,295,657 - Echvi_4427 0.89 -0.4 5,295,657 - Echvi_4427 0.89 -1.9 5,295,657 - Echvi_4427 0.89 -0.0 5,295,657 - Echvi_4427 0.89 -0.3 5,295,657 - Echvi_4427 0.89 -1.2 5,295,657 - Echvi_4427 0.89 -0.5 5,295,657 - Echvi_4427 0.89 -0.6 5,295,700 + -0.2 5,295,701 - -1.0 5,295,962 + +0.5 5,295,994 + -2.0 5,296,088 + +0.7 5,296,093 - +0.7 5,296,156 + +0.5
Or see this region's nucleotide sequence