Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3754 and Echvi_3755 are separated by 528 nucleotides Echvi_3755 and Echvi_3756 are separated by 157 nucleotides Echvi_3756 and Echvi_3757 overlap by 4 nucleotides
Echvi_3754: Echvi_3754 - Signal transduction histidine kinase, at 4,475,946 to 4,480,106
_3754
Echvi_3755: Echvi_3755 - Outer membrane cobalamin receptor protein, at 4,480,635 to 4,482,542
_3755
Echvi_3756: Echvi_3756 - hypothetical protein, at 4,482,700 to 4,483,056
_3756
Echvi_3757: Echvi_3757 - Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase, at 4,483,053 to 4,483,562
_3757
Position (kb)
4480
4481
4482
4483 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4479.655 kb on + strand, within Echvi_3754 at 4479.655 kb on + strand, within Echvi_3754 at 4479.669 kb on + strand, within Echvi_3754 at 4479.669 kb on + strand, within Echvi_3754 at 4479.670 kb on - strand, within Echvi_3754 at 4479.670 kb on - strand, within Echvi_3754 at 4479.671 kb on + strand, within Echvi_3754 at 4479.671 kb on + strand, within Echvi_3754 at 4479.672 kb on - strand, within Echvi_3754 at 4479.678 kb on + strand, within Echvi_3754 at 4479.679 kb on - strand, within Echvi_3754 at 4479.700 kb on + strand at 4479.700 kb on + strand at 4479.701 kb on - strand at 4479.742 kb on + strand at 4479.742 kb on + strand at 4479.742 kb on + strand at 4479.743 kb on - strand at 4479.743 kb on - strand at 4479.744 kb on + strand at 4479.744 kb on + strand at 4479.745 kb on - strand at 4479.745 kb on - strand at 4479.745 kb on - strand at 4479.745 kb on - strand at 4479.745 kb on - strand at 4479.880 kb on + strand at 4479.934 kb on + strand at 4479.934 kb on + strand at 4479.934 kb on + strand at 4479.935 kb on - strand at 4479.935 kb on - strand at 4479.935 kb on - strand at 4479.935 kb on - strand at 4479.935 kb on - strand at 4479.937 kb on - strand at 4479.950 kb on + strand at 4479.978 kb on - strand at 4480.035 kb on + strand at 4480.049 kb on - strand at 4480.062 kb on - strand at 4480.109 kb on + strand at 4480.109 kb on + strand at 4480.110 kb on - strand at 4480.110 kb on - strand at 4480.121 kb on + strand at 4480.135 kb on + strand at 4480.226 kb on + strand at 4480.227 kb on - strand at 4480.279 kb on + strand at 4480.288 kb on + strand at 4480.303 kb on + strand at 4480.303 kb on + strand at 4480.304 kb on - strand at 4480.347 kb on - strand at 4480.438 kb on + strand at 4480.439 kb on - strand at 4480.446 kb on + strand at 4480.580 kb on + strand at 4480.613 kb on + strand at 4480.613 kb on + strand at 4480.614 kb on - strand at 4480.626 kb on - strand at 4480.634 kb on + strand at 4480.635 kb on - strand at 4480.652 kb on + strand at 4480.652 kb on + strand at 4480.652 kb on + strand at 4480.653 kb on - strand at 4480.653 kb on - strand at 4480.653 kb on - strand at 4480.701 kb on - strand at 4480.810 kb on - strand at 4480.864 kb on + strand, within Echvi_3755 at 4480.867 kb on + strand at 4480.868 kb on - strand, within Echvi_3755 at 4481.024 kb on - strand, within Echvi_3755 at 4481.030 kb on - strand, within Echvi_3755 at 4481.063 kb on - strand, within Echvi_3755 at 4481.088 kb on + strand, within Echvi_3755 at 4481.089 kb on - strand, within Echvi_3755 at 4481.189 kb on + strand, within Echvi_3755 at 4481.190 kb on - strand, within Echvi_3755 at 4481.238 kb on - strand, within Echvi_3755 at 4481.242 kb on - strand, within Echvi_3755 at 4481.260 kb on + strand, within Echvi_3755 at 4481.260 kb on + strand, within Echvi_3755 at 4481.260 kb on + strand, within Echvi_3755 at 4481.260 kb on + strand, within Echvi_3755 at 4481.260 kb on + strand, within Echvi_3755 at 4481.261 kb on - strand, within Echvi_3755 at 4481.261 kb on - strand, within Echvi_3755 at 4481.261 kb on - strand, within Echvi_3755 at 4481.261 kb on - strand, within Echvi_3755 at 4481.261 kb on - strand, within Echvi_3755 at 4481.262 kb on + strand, within Echvi_3755 at 4481.263 kb on - strand, within Echvi_3755 at 4481.263 kb on - strand, within Echvi_3755 at 4481.425 kb on - strand, within Echvi_3755 at 4481.495 kb on + strand, within Echvi_3755 at 4481.496 kb on - strand, within Echvi_3755 at 4481.499 kb on + strand, within Echvi_3755 at 4481.499 kb on + strand, within Echvi_3755 at 4481.501 kb on + strand, within Echvi_3755 at 4481.501 kb on + strand, within Echvi_3755 at 4481.501 kb on + strand, within Echvi_3755 at 4481.501 kb on + strand, within Echvi_3755 at 4481.502 kb on - strand, within Echvi_3755 at 4481.502 kb on - strand, within Echvi_3755 at 4481.506 kb on - strand, within Echvi_3755 at 4481.528 kb on + strand, within Echvi_3755 at 4481.529 kb on - strand, within Echvi_3755 at 4481.538 kb on + strand, within Echvi_3755 at 4481.539 kb on - strand, within Echvi_3755 at 4481.540 kb on + strand, within Echvi_3755 at 4481.540 kb on + strand, within Echvi_3755 at 4481.541 kb on - strand, within Echvi_3755 at 4481.541 kb on - strand, within Echvi_3755 at 4481.581 kb on + strand, within Echvi_3755 at 4481.581 kb on + strand, within Echvi_3755 at 4481.581 kb on + strand, within Echvi_3755 at 4481.581 kb on + strand, within Echvi_3755 at 4481.582 kb on - strand, within Echvi_3755 at 4481.582 kb on - strand, within Echvi_3755 at 4481.582 kb on - strand, within Echvi_3755 at 4481.583 kb on + strand, within Echvi_3755 at 4481.583 kb on + strand, within Echvi_3755 at 4481.583 kb on + strand, within Echvi_3755 at 4481.584 kb on - strand, within Echvi_3755 at 4481.584 kb on - strand, within Echvi_3755 at 4481.584 kb on - strand, within Echvi_3755 at 4481.599 kb on + strand, within Echvi_3755 at 4481.600 kb on - strand, within Echvi_3755 at 4481.600 kb on - strand, within Echvi_3755 at 4481.659 kb on + strand, within Echvi_3755 at 4481.660 kb on - strand, within Echvi_3755 at 4481.679 kb on + strand, within Echvi_3755 at 4481.805 kb on - strand, within Echvi_3755 at 4481.811 kb on + strand, within Echvi_3755 at 4481.812 kb on - strand, within Echvi_3755 at 4481.829 kb on + strand, within Echvi_3755 at 4481.829 kb on + strand, within Echvi_3755 at 4481.829 kb on + strand, within Echvi_3755 at 4481.829 kb on + strand, within Echvi_3755 at 4481.830 kb on - strand, within Echvi_3755 at 4481.832 kb on - strand, within Echvi_3755 at 4481.832 kb on - strand, within Echvi_3755 at 4481.837 kb on - strand, within Echvi_3755 at 4481.907 kb on + strand, within Echvi_3755 at 4481.907 kb on + strand, within Echvi_3755 at 4481.907 kb on + strand, within Echvi_3755 at 4481.908 kb on - strand, within Echvi_3755 at 4481.908 kb on - strand, within Echvi_3755 at 4481.908 kb on - strand, within Echvi_3755 at 4481.947 kb on - strand, within Echvi_3755 at 4482.006 kb on + strand, within Echvi_3755 at 4482.006 kb on + strand, within Echvi_3755 at 4482.007 kb on - strand, within Echvi_3755 at 4482.007 kb on - strand, within Echvi_3755 at 4482.007 kb on - strand, within Echvi_3755 at 4482.007 kb on - strand, within Echvi_3755 at 4482.008 kb on + strand, within Echvi_3755 at 4482.008 kb on + strand, within Echvi_3755 at 4482.009 kb on - strand, within Echvi_3755 at 4482.009 kb on - strand, within Echvi_3755 at 4482.011 kb on - strand, within Echvi_3755 at 4482.011 kb on - strand, within Echvi_3755 at 4482.083 kb on - strand, within Echvi_3755 at 4482.102 kb on + strand, within Echvi_3755 at 4482.103 kb on - strand, within Echvi_3755 at 4482.104 kb on + strand, within Echvi_3755 at 4482.104 kb on + strand, within Echvi_3755 at 4482.104 kb on + strand, within Echvi_3755 at 4482.186 kb on + strand, within Echvi_3755 at 4482.345 kb on + strand, within Echvi_3755 at 4482.346 kb on - strand, within Echvi_3755 at 4482.352 kb on - strand at 4482.358 kb on + strand at 4482.385 kb on - strand at 4482.421 kb on + strand at 4482.422 kb on - strand at 4482.441 kb on + strand at 4482.455 kb on + strand at 4482.477 kb on - strand at 4482.486 kb on + strand at 4482.486 kb on + strand at 4482.487 kb on - strand at 4482.494 kb on + strand at 4482.495 kb on - strand at 4482.516 kb on - strand at 4482.682 kb on + strand at 4482.682 kb on + strand at 4482.682 kb on + strand at 4482.780 kb on + strand, within Echvi_3756 at 4482.828 kb on - strand, within Echvi_3756 at 4482.839 kb on + strand, within Echvi_3756 at 4482.840 kb on - strand, within Echvi_3756 at 4482.940 kb on + strand, within Echvi_3756 at 4482.969 kb on - strand, within Echvi_3756 at 4482.983 kb on - strand, within Echvi_3756 at 4482.983 kb on - strand, within Echvi_3756 at 4482.983 kb on - strand, within Echvi_3756 at 4482.983 kb on - strand, within Echvi_3756 at 4482.983 kb on - strand, within Echvi_3756 at 4482.983 kb on - strand, within Echvi_3756 at 4483.062 kb on + strand at 4483.062 kb on + strand at 4483.062 kb on + strand at 4483.063 kb on - strand at 4483.098 kb on + strand at 4483.141 kb on - strand, within Echvi_3757 at 4483.255 kb on + strand, within Echvi_3757 at 4483.305 kb on - strand, within Echvi_3757 at 4483.325 kb on + strand, within Echvi_3757 at 4483.326 kb on - strand, within Echvi_3757 at 4483.378 kb on + strand, within Echvi_3757 at 4483.378 kb on + strand, within Echvi_3757 at 4483.497 kb on + strand, within Echvi_3757 at 4483.498 kb on - strand, within Echvi_3757
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,479,655 + Echvi_3754 0.89 -0.7 4,479,655 + Echvi_3754 0.89 +1.2 4,479,669 + Echvi_3754 0.89 -0.8 4,479,669 + Echvi_3754 0.89 +0.7 4,479,670 - Echvi_3754 0.89 +0.2 4,479,670 - Echvi_3754 0.89 -0.2 4,479,671 + Echvi_3754 0.90 -0.1 4,479,671 + Echvi_3754 0.90 +0.1 4,479,672 - Echvi_3754 0.90 -2.3 4,479,678 + Echvi_3754 0.90 +0.7 4,479,679 - Echvi_3754 0.90 -0.2 4,479,700 + +0.3 4,479,700 + -1.3 4,479,701 - +1.3 4,479,742 + +3.4 4,479,742 + -0.3 4,479,742 + +0.0 4,479,743 - +0.1 4,479,743 - -0.9 4,479,744 + -0.3 4,479,744 + -0.8 4,479,745 - +0.5 4,479,745 - +0.1 4,479,745 - -1.2 4,479,745 - -0.6 4,479,745 - +0.1 4,479,880 + -0.2 4,479,934 + -0.0 4,479,934 + +0.8 4,479,934 + -0.0 4,479,935 - -0.4 4,479,935 - -0.2 4,479,935 - -0.4 4,479,935 - -0.1 4,479,935 - -0.6 4,479,937 - -0.3 4,479,950 + -0.1 4,479,978 - +0.3 4,480,035 + -0.1 4,480,049 - +2.0 4,480,062 - -1.6 4,480,109 + +1.7 4,480,109 + -2.0 4,480,110 - +0.6 4,480,110 - -0.4 4,480,121 + +0.3 4,480,135 + -0.3 4,480,226 + +0.2 4,480,227 - +0.8 4,480,279 + +0.5 4,480,288 + +0.7 4,480,303 + +0.4 4,480,303 + +0.1 4,480,304 - -0.0 4,480,347 - +0.3 4,480,438 + -0.8 4,480,439 - +0.7 4,480,446 + -1.7 4,480,580 + -1.0 4,480,613 + -2.2 4,480,613 + -0.2 4,480,614 - -0.2 4,480,626 - +0.7 4,480,634 + -0.9 4,480,635 - -1.5 4,480,652 + -0.2 4,480,652 + +0.8 4,480,652 + -0.2 4,480,653 - -0.8 4,480,653 - -0.9 4,480,653 - +0.6 4,480,701 - -1.1 4,480,810 - +0.5 4,480,864 + Echvi_3755 0.12 -0.1 4,480,867 + -0.5 4,480,868 - Echvi_3755 0.12 -0.4 4,481,024 - Echvi_3755 0.20 +0.1 4,481,030 - Echvi_3755 0.21 -0.9 4,481,063 - Echvi_3755 0.22 -0.2 4,481,088 + Echvi_3755 0.24 -1.5 4,481,089 - Echvi_3755 0.24 -1.2 4,481,189 + Echvi_3755 0.29 -0.7 4,481,190 - Echvi_3755 0.29 +0.8 4,481,238 - Echvi_3755 0.32 -1.1 4,481,242 - Echvi_3755 0.32 -0.5 4,481,260 + Echvi_3755 0.33 +0.1 4,481,260 + Echvi_3755 0.33 +0.1 4,481,260 + Echvi_3755 0.33 +0.7 4,481,260 + Echvi_3755 0.33 -1.2 4,481,260 + Echvi_3755 0.33 +1.3 4,481,261 - Echvi_3755 0.33 -1.2 4,481,261 - Echvi_3755 0.33 +0.8 4,481,261 - Echvi_3755 0.33 -1.2 4,481,261 - Echvi_3755 0.33 +0.1 4,481,261 - Echvi_3755 0.33 -2.1 4,481,262 + Echvi_3755 0.33 -0.6 4,481,263 - Echvi_3755 0.33 -1.0 4,481,263 - Echvi_3755 0.33 -0.4 4,481,425 - Echvi_3755 0.41 -0.2 4,481,495 + Echvi_3755 0.45 -0.5 4,481,496 - Echvi_3755 0.45 -0.2 4,481,499 + Echvi_3755 0.45 -1.0 4,481,499 + Echvi_3755 0.45 -0.5 4,481,501 + Echvi_3755 0.45 -0.1 4,481,501 + Echvi_3755 0.45 +0.4 4,481,501 + Echvi_3755 0.45 +0.5 4,481,501 + Echvi_3755 0.45 -0.5 4,481,502 - Echvi_3755 0.45 -0.0 4,481,502 - Echvi_3755 0.45 -0.1 4,481,506 - Echvi_3755 0.46 -0.0 4,481,528 + Echvi_3755 0.47 -1.1 4,481,529 - Echvi_3755 0.47 -1.4 4,481,538 + Echvi_3755 0.47 +1.4 4,481,539 - Echvi_3755 0.47 -1.1 4,481,540 + Echvi_3755 0.47 -0.6 4,481,540 + Echvi_3755 0.47 -0.0 4,481,541 - Echvi_3755 0.47 -1.3 4,481,541 - Echvi_3755 0.47 -0.5 4,481,581 + Echvi_3755 0.50 -1.9 4,481,581 + Echvi_3755 0.50 -1.3 4,481,581 + Echvi_3755 0.50 -1.0 4,481,581 + Echvi_3755 0.50 -0.9 4,481,582 - Echvi_3755 0.50 -1.8 4,481,582 - Echvi_3755 0.50 -1.2 4,481,582 - Echvi_3755 0.50 -2.1 4,481,583 + Echvi_3755 0.50 -1.1 4,481,583 + Echvi_3755 0.50 -1.0 4,481,583 + Echvi_3755 0.50 -1.0 4,481,584 - Echvi_3755 0.50 -0.5 4,481,584 - Echvi_3755 0.50 -1.7 4,481,584 - Echvi_3755 0.50 -1.0 4,481,599 + Echvi_3755 0.51 -0.7 4,481,600 - Echvi_3755 0.51 -2.1 4,481,600 - Echvi_3755 0.51 -1.2 4,481,659 + Echvi_3755 0.54 -1.4 4,481,660 - Echvi_3755 0.54 -1.6 4,481,679 + Echvi_3755 0.55 -1.6 4,481,805 - Echvi_3755 0.61 -0.8 4,481,811 + Echvi_3755 0.62 -0.4 4,481,812 - Echvi_3755 0.62 -1.0 4,481,829 + Echvi_3755 0.63 -1.4 4,481,829 + Echvi_3755 0.63 +0.3 4,481,829 + Echvi_3755 0.63 -1.5 4,481,829 + Echvi_3755 0.63 -1.2 4,481,830 - Echvi_3755 0.63 -0.2 4,481,832 - Echvi_3755 0.63 +0.5 4,481,832 - Echvi_3755 0.63 +0.7 4,481,837 - Echvi_3755 0.63 -0.7 4,481,907 + Echvi_3755 0.67 -1.9 4,481,907 + Echvi_3755 0.67 +1.8 4,481,907 + Echvi_3755 0.67 -0.2 4,481,908 - Echvi_3755 0.67 -1.2 4,481,908 - Echvi_3755 0.67 -0.4 4,481,908 - Echvi_3755 0.67 -1.7 4,481,947 - Echvi_3755 0.69 -0.9 4,482,006 + Echvi_3755 0.72 +0.1 4,482,006 + Echvi_3755 0.72 -0.3 4,482,007 - Echvi_3755 0.72 +0.3 4,482,007 - Echvi_3755 0.72 +0.4 4,482,007 - Echvi_3755 0.72 -0.7 4,482,007 - Echvi_3755 0.72 +2.4 4,482,008 + Echvi_3755 0.72 +0.1 4,482,008 + Echvi_3755 0.72 +0.5 4,482,009 - Echvi_3755 0.72 -1.5 4,482,009 - Echvi_3755 0.72 -2.7 4,482,011 - Echvi_3755 0.72 -0.1 4,482,011 - Echvi_3755 0.72 -1.2 4,482,083 - Echvi_3755 0.76 +0.2 4,482,102 + Echvi_3755 0.77 -1.6 4,482,103 - Echvi_3755 0.77 +0.1 4,482,104 + Echvi_3755 0.77 -0.8 4,482,104 + Echvi_3755 0.77 -0.5 4,482,104 + Echvi_3755 0.77 +0.0 4,482,186 + Echvi_3755 0.81 -0.3 4,482,345 + Echvi_3755 0.90 -1.2 4,482,346 - Echvi_3755 0.90 -1.1 4,482,352 - -0.5 4,482,358 + -0.5 4,482,385 - +1.0 4,482,421 + -1.5 4,482,422 - -1.4 4,482,441 + +0.0 4,482,455 + -1.6 4,482,477 - -0.1 4,482,486 + +0.0 4,482,486 + +0.5 4,482,487 - -1.8 4,482,494 + +0.6 4,482,495 - -1.6 4,482,516 - -1.2 4,482,682 + +0.4 4,482,682 + +0.1 4,482,682 + -0.5 4,482,780 + Echvi_3756 0.22 -0.5 4,482,828 - Echvi_3756 0.36 +0.2 4,482,839 + Echvi_3756 0.39 -1.3 4,482,840 - Echvi_3756 0.39 +0.8 4,482,940 + Echvi_3756 0.67 -1.7 4,482,969 - Echvi_3756 0.75 -0.7 4,482,983 - Echvi_3756 0.79 +0.4 4,482,983 - Echvi_3756 0.79 -0.4 4,482,983 - Echvi_3756 0.79 +0.2 4,482,983 - Echvi_3756 0.79 -0.7 4,482,983 - Echvi_3756 0.79 -0.3 4,482,983 - Echvi_3756 0.79 -0.0 4,483,062 + +0.8 4,483,062 + -0.1 4,483,062 + -1.3 4,483,063 - -0.8 4,483,098 + +1.5 4,483,141 - Echvi_3757 0.17 -0.4 4,483,255 + Echvi_3757 0.40 -0.8 4,483,305 - Echvi_3757 0.49 -0.7 4,483,325 + Echvi_3757 0.53 +0.7 4,483,326 - Echvi_3757 0.54 -1.0 4,483,378 + Echvi_3757 0.64 -0.1 4,483,378 + Echvi_3757 0.64 -0.2 4,483,497 + Echvi_3757 0.87 +0.2 4,483,498 - Echvi_3757 0.87 -0.5
Or see this region's nucleotide sequence