Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2990 and Echvi_2991 are separated by 129 nucleotides Echvi_2991 and Echvi_2992 are separated by 250 nucleotides
Echvi_2990: Echvi_2990 - Acyl-CoA dehydrogenases, at 3,573,447 to 3,574,655
_2990
Echvi_2991: Echvi_2991 - Tryptophan 2,3-dioxygenase (vermilion), at 3,574,785 to 3,575,759
_2991
Echvi_2992: Echvi_2992 - Uncharacterized FAD-dependent dehydrogenases, at 3,576,010 to 3,577,593
_2992
Position (kb)
3574
3575
3576 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3573.829 kb on + strand, within Echvi_2990 at 3573.830 kb on - strand, within Echvi_2990 at 3573.998 kb on + strand, within Echvi_2990 at 3573.999 kb on - strand, within Echvi_2990 at 3573.999 kb on - strand, within Echvi_2990 at 3573.999 kb on - strand, within Echvi_2990 at 3574.020 kb on - strand, within Echvi_2990 at 3574.046 kb on + strand, within Echvi_2990 at 3574.047 kb on - strand, within Echvi_2990 at 3574.047 kb on - strand, within Echvi_2990 at 3574.047 kb on - strand, within Echvi_2990 at 3574.083 kb on + strand, within Echvi_2990 at 3574.083 kb on + strand, within Echvi_2990 at 3574.087 kb on - strand, within Echvi_2990 at 3574.087 kb on - strand, within Echvi_2990 at 3574.093 kb on - strand, within Echvi_2990 at 3574.093 kb on - strand, within Echvi_2990 at 3574.112 kb on + strand, within Echvi_2990 at 3574.137 kb on + strand, within Echvi_2990 at 3574.138 kb on - strand, within Echvi_2990 at 3574.141 kb on - strand, within Echvi_2990 at 3574.144 kb on + strand, within Echvi_2990 at 3574.388 kb on + strand, within Echvi_2990 at 3574.388 kb on + strand, within Echvi_2990 at 3574.389 kb on - strand, within Echvi_2990 at 3574.389 kb on - strand, within Echvi_2990 at 3574.389 kb on - strand, within Echvi_2990 at 3574.390 kb on + strand, within Echvi_2990 at 3574.391 kb on - strand, within Echvi_2990 at 3574.412 kb on - strand, within Echvi_2990 at 3574.412 kb on - strand, within Echvi_2990 at 3574.507 kb on + strand, within Echvi_2990 at 3574.507 kb on + strand, within Echvi_2990 at 3574.508 kb on - strand, within Echvi_2990 at 3574.557 kb on + strand at 3574.656 kb on - strand at 3574.657 kb on + strand at 3574.658 kb on - strand at 3574.658 kb on - strand at 3574.699 kb on - strand at 3574.700 kb on + strand at 3574.720 kb on + strand at 3574.734 kb on + strand at 3574.780 kb on + strand at 3574.805 kb on + strand at 3574.834 kb on + strand at 3574.834 kb on + strand at 3574.835 kb on - strand at 3574.835 kb on - strand at 3574.846 kb on - strand at 3574.846 kb on - strand at 3574.848 kb on - strand at 3574.894 kb on - strand, within Echvi_2991 at 3574.906 kb on + strand, within Echvi_2991 at 3574.907 kb on - strand, within Echvi_2991 at 3574.911 kb on + strand, within Echvi_2991 at 3574.912 kb on - strand, within Echvi_2991 at 3574.912 kb on - strand, within Echvi_2991 at 3574.920 kb on + strand, within Echvi_2991 at 3574.920 kb on + strand, within Echvi_2991 at 3574.921 kb on - strand, within Echvi_2991 at 3574.921 kb on - strand, within Echvi_2991 at 3574.921 kb on - strand, within Echvi_2991 at 3574.922 kb on + strand, within Echvi_2991 at 3574.923 kb on - strand, within Echvi_2991 at 3574.970 kb on + strand, within Echvi_2991 at 3575.032 kb on + strand, within Echvi_2991 at 3575.033 kb on - strand, within Echvi_2991 at 3575.068 kb on + strand, within Echvi_2991 at 3575.069 kb on - strand, within Echvi_2991 at 3575.069 kb on - strand, within Echvi_2991 at 3575.069 kb on - strand, within Echvi_2991 at 3575.183 kb on + strand, within Echvi_2991 at 3575.304 kb on - strand, within Echvi_2991 at 3575.470 kb on + strand, within Echvi_2991 at 3575.470 kb on + strand, within Echvi_2991 at 3575.544 kb on + strand, within Echvi_2991 at 3575.545 kb on - strand, within Echvi_2991 at 3575.565 kb on - strand, within Echvi_2991 at 3575.576 kb on + strand, within Echvi_2991 at 3575.580 kb on + strand, within Echvi_2991 at 3575.580 kb on + strand, within Echvi_2991 at 3575.580 kb on + strand, within Echvi_2991 at 3575.581 kb on - strand, within Echvi_2991 at 3575.581 kb on - strand, within Echvi_2991 at 3575.588 kb on + strand, within Echvi_2991 at 3575.637 kb on + strand, within Echvi_2991 at 3575.638 kb on - strand, within Echvi_2991 at 3575.671 kb on - strand at 3575.783 kb on + strand at 3575.783 kb on + strand at 3575.783 kb on + strand at 3575.784 kb on - strand at 3575.784 kb on - strand at 3575.788 kb on - strand at 3575.789 kb on + strand at 3575.789 kb on + strand at 3575.790 kb on - strand at 3575.790 kb on - strand at 3575.805 kb on - strand at 3575.805 kb on - strand at 3575.815 kb on + strand at 3575.815 kb on + strand at 3575.816 kb on - strand at 3575.816 kb on - strand at 3575.816 kb on - strand at 3575.829 kb on + strand at 3575.830 kb on - strand at 3575.850 kb on - strand at 3575.964 kb on - strand at 3575.977 kb on + strand at 3575.977 kb on + strand at 3575.977 kb on + strand at 3575.977 kb on + strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.978 kb on - strand at 3575.990 kb on + strand at 3575.999 kb on + strand at 3575.999 kb on + strand at 3576.000 kb on - strand at 3576.030 kb on + strand at 3576.030 kb on + strand at 3576.030 kb on + strand at 3576.030 kb on + strand at 3576.031 kb on - strand at 3576.031 kb on - strand at 3576.031 kb on - strand at 3576.031 kb on - strand at 3576.075 kb on + strand at 3576.075 kb on + strand at 3576.076 kb on - strand at 3576.092 kb on + strand at 3576.093 kb on - strand at 3576.114 kb on + strand at 3576.146 kb on + strand at 3576.146 kb on + strand at 3576.146 kb on + strand at 3576.147 kb on - strand at 3576.147 kb on - strand at 3576.147 kb on - strand at 3576.147 kb on - strand at 3576.180 kb on + strand, within Echvi_2992 at 3576.223 kb on - strand, within Echvi_2992 at 3576.223 kb on - strand, within Echvi_2992 at 3576.253 kb on - strand, within Echvi_2992 at 3576.362 kb on + strand, within Echvi_2992 at 3576.362 kb on + strand, within Echvi_2992 at 3576.362 kb on + strand, within Echvi_2992 at 3576.362 kb on + strand, within Echvi_2992 at 3576.363 kb on - strand, within Echvi_2992 at 3576.366 kb on + strand, within Echvi_2992 at 3576.394 kb on - strand, within Echvi_2992 at 3576.394 kb on - strand, within Echvi_2992 at 3576.410 kb on + strand, within Echvi_2992 at 3576.453 kb on + strand, within Echvi_2992 at 3576.453 kb on + strand, within Echvi_2992 at 3576.454 kb on - strand, within Echvi_2992 at 3576.457 kb on + strand, within Echvi_2992 at 3576.476 kb on - strand, within Echvi_2992 at 3576.504 kb on - strand, within Echvi_2992 at 3576.549 kb on + strand, within Echvi_2992 at 3576.549 kb on + strand, within Echvi_2992 at 3576.550 kb on - strand, within Echvi_2992 at 3576.550 kb on - strand, within Echvi_2992 at 3576.551 kb on + strand, within Echvi_2992 at 3576.580 kb on - strand, within Echvi_2992 at 3576.580 kb on - strand, within Echvi_2992 at 3576.603 kb on - strand, within Echvi_2992 at 3576.606 kb on + strand, within Echvi_2992 at 3576.606 kb on + strand, within Echvi_2992 at 3576.607 kb on - strand, within Echvi_2992 at 3576.607 kb on - strand, within Echvi_2992 at 3576.607 kb on - strand, within Echvi_2992 at 3576.663 kb on + strand, within Echvi_2992
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,573,829 + Echvi_2990 0.32 -0.6 3,573,830 - Echvi_2990 0.32 +0.0 3,573,998 + Echvi_2990 0.46 -1.2 3,573,999 - Echvi_2990 0.46 -0.4 3,573,999 - Echvi_2990 0.46 -0.5 3,573,999 - Echvi_2990 0.46 -0.9 3,574,020 - Echvi_2990 0.47 +0.1 3,574,046 + Echvi_2990 0.50 +0.3 3,574,047 - Echvi_2990 0.50 +0.3 3,574,047 - Echvi_2990 0.50 -0.1 3,574,047 - Echvi_2990 0.50 +3.2 3,574,083 + Echvi_2990 0.53 +0.3 3,574,083 + Echvi_2990 0.53 -0.7 3,574,087 - Echvi_2990 0.53 +1.0 3,574,087 - Echvi_2990 0.53 -0.7 3,574,093 - Echvi_2990 0.53 -0.8 3,574,093 - Echvi_2990 0.53 -0.5 3,574,112 + Echvi_2990 0.55 +0.7 3,574,137 + Echvi_2990 0.57 -0.4 3,574,138 - Echvi_2990 0.57 +0.3 3,574,141 - Echvi_2990 0.57 +0.2 3,574,144 + Echvi_2990 0.58 -0.7 3,574,388 + Echvi_2990 0.78 +0.1 3,574,388 + Echvi_2990 0.78 -0.2 3,574,389 - Echvi_2990 0.78 +1.5 3,574,389 - Echvi_2990 0.78 +0.7 3,574,389 - Echvi_2990 0.78 +1.3 3,574,390 + Echvi_2990 0.78 +1.3 3,574,391 - Echvi_2990 0.78 -0.8 3,574,412 - Echvi_2990 0.80 -0.3 3,574,412 - Echvi_2990 0.80 -1.5 3,574,507 + Echvi_2990 0.88 -0.2 3,574,507 + Echvi_2990 0.88 -1.0 3,574,508 - Echvi_2990 0.88 +0.4 3,574,557 + -0.8 3,574,656 - +0.8 3,574,657 + -0.5 3,574,658 - +0.2 3,574,658 - +0.7 3,574,699 - -0.3 3,574,700 + +0.3 3,574,720 + +0.4 3,574,734 + -0.1 3,574,780 + +0.2 3,574,805 + -1.3 3,574,834 + -1.6 3,574,834 + -1.1 3,574,835 - -1.6 3,574,835 - -0.5 3,574,846 - -2.6 3,574,846 - -1.1 3,574,848 - -1.2 3,574,894 - Echvi_2991 0.11 -0.7 3,574,906 + Echvi_2991 0.12 -1.2 3,574,907 - Echvi_2991 0.13 -0.2 3,574,911 + Echvi_2991 0.13 -1.0 3,574,912 - Echvi_2991 0.13 -1.3 3,574,912 - Echvi_2991 0.13 -1.0 3,574,920 + Echvi_2991 0.14 +0.1 3,574,920 + Echvi_2991 0.14 -1.2 3,574,921 - Echvi_2991 0.14 -0.7 3,574,921 - Echvi_2991 0.14 -0.9 3,574,921 - Echvi_2991 0.14 -0.2 3,574,922 + Echvi_2991 0.14 +1.8 3,574,923 - Echvi_2991 0.14 -0.8 3,574,970 + Echvi_2991 0.19 -0.3 3,575,032 + Echvi_2991 0.25 -0.7 3,575,033 - Echvi_2991 0.25 -0.8 3,575,068 + Echvi_2991 0.29 -1.3 3,575,069 - Echvi_2991 0.29 +0.1 3,575,069 - Echvi_2991 0.29 +0.3 3,575,069 - Echvi_2991 0.29 -1.5 3,575,183 + Echvi_2991 0.41 -2.9 3,575,304 - Echvi_2991 0.53 -1.2 3,575,470 + Echvi_2991 0.70 -0.9 3,575,470 + Echvi_2991 0.70 +0.0 3,575,544 + Echvi_2991 0.78 -1.6 3,575,545 - Echvi_2991 0.78 -1.2 3,575,565 - Echvi_2991 0.80 -0.9 3,575,576 + Echvi_2991 0.81 -0.7 3,575,580 + Echvi_2991 0.82 +0.3 3,575,580 + Echvi_2991 0.82 -0.5 3,575,580 + Echvi_2991 0.82 -0.5 3,575,581 - Echvi_2991 0.82 -0.3 3,575,581 - Echvi_2991 0.82 -0.0 3,575,588 + Echvi_2991 0.82 -1.3 3,575,637 + Echvi_2991 0.87 -2.1 3,575,638 - Echvi_2991 0.87 +0.1 3,575,671 - -1.0 3,575,783 + -1.1 3,575,783 + +0.1 3,575,783 + -1.3 3,575,784 - +1.0 3,575,784 - +0.6 3,575,788 - +0.0 3,575,789 + +1.0 3,575,789 + -1.3 3,575,790 - +0.3 3,575,790 - -1.4 3,575,805 - +0.4 3,575,805 - -1.7 3,575,815 + +0.5 3,575,815 + -0.6 3,575,816 - -0.7 3,575,816 - -1.6 3,575,816 - +0.7 3,575,829 + -0.8 3,575,830 - -2.1 3,575,850 - +0.4 3,575,964 - +0.1 3,575,977 + +0.7 3,575,977 + -0.3 3,575,977 + -0.0 3,575,977 + +1.1 3,575,978 - -0.0 3,575,978 - +0.0 3,575,978 - -1.0 3,575,978 - +1.3 3,575,978 - -0.1 3,575,978 - +0.8 3,575,978 - +0.5 3,575,978 - +0.3 3,575,990 + +0.2 3,575,999 + -0.2 3,575,999 + +0.7 3,576,000 - -1.7 3,576,030 + -2.1 3,576,030 + -0.5 3,576,030 + -0.9 3,576,030 + -2.4 3,576,031 - +0.1 3,576,031 - -0.0 3,576,031 - +0.5 3,576,031 - -1.3 3,576,075 + -0.2 3,576,075 + +2.3 3,576,076 - +0.7 3,576,092 + -0.3 3,576,093 - -1.1 3,576,114 + -0.1 3,576,146 + -0.7 3,576,146 + +0.3 3,576,146 + +0.3 3,576,147 - +0.8 3,576,147 - +1.1 3,576,147 - +0.1 3,576,147 - -0.0 3,576,180 + Echvi_2992 0.11 +0.1 3,576,223 - Echvi_2992 0.13 -0.7 3,576,223 - Echvi_2992 0.13 +0.5 3,576,253 - Echvi_2992 0.15 -1.9 3,576,362 + Echvi_2992 0.22 -0.3 3,576,362 + Echvi_2992 0.22 -1.2 3,576,362 + Echvi_2992 0.22 -0.3 3,576,362 + Echvi_2992 0.22 +1.8 3,576,363 - Echvi_2992 0.22 +0.4 3,576,366 + Echvi_2992 0.22 +0.2 3,576,394 - Echvi_2992 0.24 +0.4 3,576,394 - Echvi_2992 0.24 +0.0 3,576,410 + Echvi_2992 0.25 +0.6 3,576,453 + Echvi_2992 0.28 -1.6 3,576,453 + Echvi_2992 0.28 -0.7 3,576,454 - Echvi_2992 0.28 -0.5 3,576,457 + Echvi_2992 0.28 -0.3 3,576,476 - Echvi_2992 0.29 +0.6 3,576,504 - Echvi_2992 0.31 +0.3 3,576,549 + Echvi_2992 0.34 -0.0 3,576,549 + Echvi_2992 0.34 +0.1 3,576,550 - Echvi_2992 0.34 +1.0 3,576,550 - Echvi_2992 0.34 +1.9 3,576,551 + Echvi_2992 0.34 -1.6 3,576,580 - Echvi_2992 0.36 -0.8 3,576,580 - Echvi_2992 0.36 +0.5 3,576,603 - Echvi_2992 0.37 +0.1 3,576,606 + Echvi_2992 0.38 -0.4 3,576,606 + Echvi_2992 0.38 -2.0 3,576,607 - Echvi_2992 0.38 +0.3 3,576,607 - Echvi_2992 0.38 +0.2 3,576,607 - Echvi_2992 0.38 +0.3 3,576,663 + Echvi_2992 0.41 -3.0
Or see this region's nucleotide sequence