Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2914 and Echvi_2915 are separated by 118 nucleotides Echvi_2915 and Echvi_2916 are separated by 50 nucleotides
Echvi_2914: Echvi_2914 - putative nicotinate phosphoribosyltransferase, at 3,488,943 to 3,490,418
_2914
Echvi_2915: Echvi_2915 - Amidases related to nicotinamidase, at 3,490,537 to 3,491,154
_2915
Echvi_2916: Echvi_2916 - phenazine biosynthesis protein PhzF family, at 3,491,205 to 3,491,996
_2916
Position (kb)
3490
3491
3492 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3490.411 kb on - strand at 3490.411 kb on - strand at 3490.411 kb on - strand at 3490.417 kb on - strand at 3490.417 kb on - strand at 3490.417 kb on - strand at 3490.422 kb on - strand at 3490.430 kb on - strand at 3490.492 kb on + strand at 3490.492 kb on + strand at 3490.820 kb on + strand, within Echvi_2915 at 3490.871 kb on + strand, within Echvi_2915 at 3490.872 kb on - strand, within Echvi_2915 at 3490.880 kb on - strand, within Echvi_2915 at 3490.944 kb on + strand, within Echvi_2915 at 3490.947 kb on + strand, within Echvi_2915 at 3490.960 kb on + strand, within Echvi_2915 at 3490.960 kb on + strand, within Echvi_2915 at 3490.966 kb on - strand, within Echvi_2915 at 3490.966 kb on - strand, within Echvi_2915 at 3490.992 kb on + strand, within Echvi_2915 at 3490.993 kb on - strand, within Echvi_2915 at 3491.036 kb on - strand, within Echvi_2915 at 3491.065 kb on - strand, within Echvi_2915 at 3491.070 kb on - strand, within Echvi_2915 at 3491.084 kb on - strand, within Echvi_2915 at 3491.084 kb on - strand, within Echvi_2915 at 3491.084 kb on - strand, within Echvi_2915 at 3491.166 kb on - strand at 3491.166 kb on - strand at 3491.184 kb on + strand at 3491.184 kb on + strand at 3491.184 kb on + strand at 3491.185 kb on - strand at 3491.186 kb on + strand at 3491.205 kb on - strand at 3491.205 kb on - strand at 3491.416 kb on + strand, within Echvi_2916 at 3491.417 kb on - strand, within Echvi_2916 at 3491.447 kb on + strand, within Echvi_2916 at 3491.447 kb on + strand, within Echvi_2916 at 3491.454 kb on + strand, within Echvi_2916 at 3491.454 kb on + strand, within Echvi_2916 at 3491.458 kb on + strand, within Echvi_2916 at 3491.458 kb on + strand, within Echvi_2916 at 3491.458 kb on + strand, within Echvi_2916 at 3491.459 kb on - strand, within Echvi_2916 at 3491.459 kb on - strand, within Echvi_2916 at 3491.525 kb on + strand, within Echvi_2916 at 3491.525 kb on + strand, within Echvi_2916 at 3491.526 kb on - strand, within Echvi_2916 at 3491.620 kb on + strand, within Echvi_2916 at 3491.675 kb on + strand, within Echvi_2916 at 3491.676 kb on - strand, within Echvi_2916 at 3491.686 kb on - strand, within Echvi_2916 at 3491.689 kb on + strand, within Echvi_2916 at 3491.690 kb on - strand, within Echvi_2916 at 3491.690 kb on - strand, within Echvi_2916 at 3491.690 kb on - strand, within Echvi_2916 at 3491.690 kb on - strand, within Echvi_2916 at 3491.764 kb on - strand, within Echvi_2916 at 3491.768 kb on + strand, within Echvi_2916 at 3491.768 kb on + strand, within Echvi_2916 at 3491.768 kb on + strand, within Echvi_2916 at 3491.768 kb on + strand, within Echvi_2916 at 3491.770 kb on + strand, within Echvi_2916 at 3491.770 kb on + strand, within Echvi_2916 at 3491.771 kb on - strand, within Echvi_2916 at 3491.771 kb on - strand, within Echvi_2916 at 3491.772 kb on + strand, within Echvi_2916 at 3491.772 kb on + strand, within Echvi_2916 at 3491.772 kb on + strand, within Echvi_2916 at 3491.772 kb on + strand, within Echvi_2916 at 3491.773 kb on - strand, within Echvi_2916 at 3491.773 kb on - strand, within Echvi_2916 at 3491.781 kb on + strand, within Echvi_2916 at 3491.850 kb on + strand, within Echvi_2916 at 3491.871 kb on - strand, within Echvi_2916 at 3491.882 kb on - strand, within Echvi_2916 at 3491.949 kb on - strand at 3491.949 kb on - strand at 3491.994 kb on + strand at 3491.997 kb on + strand at 3492.007 kb on + strand at 3492.039 kb on + strand at 3492.040 kb on - strand at 3492.059 kb on - strand at 3492.069 kb on + strand at 3492.145 kb on - strand at 3492.145 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,490,411 - +0.1 3,490,411 - -0.5 3,490,411 - +1.4 3,490,417 - -0.6 3,490,417 - -0.3 3,490,417 - -1.7 3,490,422 - -1.7 3,490,430 - -0.5 3,490,492 + +0.5 3,490,492 + +1.4 3,490,820 + Echvi_2915 0.46 -1.2 3,490,871 + Echvi_2915 0.54 -0.6 3,490,872 - Echvi_2915 0.54 -0.3 3,490,880 - Echvi_2915 0.56 -0.0 3,490,944 + Echvi_2915 0.66 +2.1 3,490,947 + Echvi_2915 0.66 -0.9 3,490,960 + Echvi_2915 0.68 -0.2 3,490,960 + Echvi_2915 0.68 -1.1 3,490,966 - Echvi_2915 0.69 +0.5 3,490,966 - Echvi_2915 0.69 +0.0 3,490,992 + Echvi_2915 0.74 +0.3 3,490,993 - Echvi_2915 0.74 +0.3 3,491,036 - Echvi_2915 0.81 +0.4 3,491,065 - Echvi_2915 0.85 +0.4 3,491,070 - Echvi_2915 0.86 +0.2 3,491,084 - Echvi_2915 0.89 -0.5 3,491,084 - Echvi_2915 0.89 -0.8 3,491,084 - Echvi_2915 0.89 +0.3 3,491,166 - -0.8 3,491,166 - -0.1 3,491,184 + +1.5 3,491,184 + +0.8 3,491,184 + +0.4 3,491,185 - +0.2 3,491,186 + -0.8 3,491,205 - -0.5 3,491,205 - +0.3 3,491,416 + Echvi_2916 0.27 -0.7 3,491,417 - Echvi_2916 0.27 +0.8 3,491,447 + Echvi_2916 0.31 -0.0 3,491,447 + Echvi_2916 0.31 -0.7 3,491,454 + Echvi_2916 0.31 +1.3 3,491,454 + Echvi_2916 0.31 +0.2 3,491,458 + Echvi_2916 0.32 -0.5 3,491,458 + Echvi_2916 0.32 -0.4 3,491,458 + Echvi_2916 0.32 +0.8 3,491,459 - Echvi_2916 0.32 +0.0 3,491,459 - Echvi_2916 0.32 -0.2 3,491,525 + Echvi_2916 0.40 +0.6 3,491,525 + Echvi_2916 0.40 -0.2 3,491,526 - Echvi_2916 0.41 +0.1 3,491,620 + Echvi_2916 0.52 -1.5 3,491,675 + Echvi_2916 0.59 +1.3 3,491,676 - Echvi_2916 0.59 -0.0 3,491,686 - Echvi_2916 0.61 -0.0 3,491,689 + Echvi_2916 0.61 -0.4 3,491,690 - Echvi_2916 0.61 -0.1 3,491,690 - Echvi_2916 0.61 -2.4 3,491,690 - Echvi_2916 0.61 +0.2 3,491,690 - Echvi_2916 0.61 +1.3 3,491,764 - Echvi_2916 0.71 -0.8 3,491,768 + Echvi_2916 0.71 -0.2 3,491,768 + Echvi_2916 0.71 -0.7 3,491,768 + Echvi_2916 0.71 +0.2 3,491,768 + Echvi_2916 0.71 -0.2 3,491,770 + Echvi_2916 0.71 -0.2 3,491,770 + Echvi_2916 0.71 +0.0 3,491,771 - Echvi_2916 0.71 -1.1 3,491,771 - Echvi_2916 0.71 -0.8 3,491,772 + Echvi_2916 0.72 +0.2 3,491,772 + Echvi_2916 0.72 +0.1 3,491,772 + Echvi_2916 0.72 -0.2 3,491,772 + Echvi_2916 0.72 -0.4 3,491,773 - Echvi_2916 0.72 +0.2 3,491,773 - Echvi_2916 0.72 -0.5 3,491,781 + Echvi_2916 0.73 +0.2 3,491,850 + Echvi_2916 0.81 -0.2 3,491,871 - Echvi_2916 0.84 -1.9 3,491,882 - Echvi_2916 0.85 -1.0 3,491,949 - +0.4 3,491,949 - -0.7 3,491,994 + -0.2 3,491,997 + -0.2 3,492,007 + +1.3 3,492,039 + +0.2 3,492,040 - -0.1 3,492,059 - -0.4 3,492,069 + -0.2 3,492,145 - +0.0 3,492,145 - -0.7
Or see this region's nucleotide sequence