Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2485 and Echvi_2486 are separated by 259 nucleotides Echvi_2486 and Echvi_2487 are separated by 68 nucleotides
Echvi_2485: Echvi_2485 - AraC-type DNA-binding domain-containing proteins, at 2,952,993 to 2,954,081
_2485
Echvi_2486: Echvi_2486 - hypothetical protein, at 2,954,341 to 2,954,937
_2486
Echvi_2487: Echvi_2487 - Fatty acid desaturase, at 2,955,006 to 2,956,082
_2487
Position (kb)
2954
2955 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2953.400 kb on + strand, within Echvi_2485 at 2953.400 kb on + strand, within Echvi_2485 at 2953.401 kb on - strand, within Echvi_2485 at 2953.422 kb on + strand, within Echvi_2485 at 2953.423 kb on - strand, within Echvi_2485 at 2953.423 kb on - strand, within Echvi_2485 at 2953.423 kb on - strand, within Echvi_2485 at 2953.423 kb on - strand, within Echvi_2485 at 2953.483 kb on + strand, within Echvi_2485 at 2953.484 kb on - strand, within Echvi_2485 at 2953.484 kb on - strand, within Echvi_2485 at 2953.490 kb on - strand, within Echvi_2485 at 2953.490 kb on - strand, within Echvi_2485 at 2953.558 kb on - strand, within Echvi_2485 at 2953.568 kb on + strand, within Echvi_2485 at 2953.568 kb on + strand, within Echvi_2485 at 2953.568 kb on + strand, within Echvi_2485 at 2953.568 kb on + strand, within Echvi_2485 at 2953.645 kb on + strand, within Echvi_2485 at 2953.646 kb on - strand, within Echvi_2485 at 2953.654 kb on + strand, within Echvi_2485 at 2953.654 kb on + strand, within Echvi_2485 at 2953.663 kb on + strand, within Echvi_2485 at 2953.664 kb on - strand, within Echvi_2485 at 2953.708 kb on + strand, within Echvi_2485 at 2953.766 kb on + strand, within Echvi_2485 at 2953.766 kb on + strand, within Echvi_2485 at 2953.784 kb on + strand, within Echvi_2485 at 2953.852 kb on + strand, within Echvi_2485 at 2953.852 kb on + strand, within Echvi_2485 at 2953.852 kb on + strand, within Echvi_2485 at 2953.853 kb on - strand, within Echvi_2485 at 2953.853 kb on - strand, within Echvi_2485 at 2953.853 kb on - strand, within Echvi_2485 at 2953.908 kb on + strand, within Echvi_2485 at 2953.917 kb on - strand, within Echvi_2485 at 2953.934 kb on - strand, within Echvi_2485 at 2953.934 kb on - strand, within Echvi_2485 at 2953.936 kb on - strand, within Echvi_2485 at 2953.948 kb on + strand, within Echvi_2485 at 2953.949 kb on - strand, within Echvi_2485 at 2953.960 kb on - strand, within Echvi_2485 at 2954.008 kb on + strand at 2954.023 kb on + strand at 2954.067 kb on + strand at 2954.084 kb on + strand at 2954.084 kb on + strand at 2954.085 kb on - strand at 2954.085 kb on - strand at 2954.085 kb on - strand at 2954.095 kb on + strand at 2954.104 kb on - strand at 2954.152 kb on + strand at 2954.172 kb on + strand at 2954.172 kb on + strand at 2954.173 kb on - strand at 2954.173 kb on - strand at 2954.173 kb on - strand at 2954.173 kb on - strand at 2954.175 kb on + strand at 2954.180 kb on - strand at 2954.196 kb on + strand at 2954.213 kb on + strand at 2954.224 kb on + strand at 2954.224 kb on + strand at 2954.224 kb on + strand at 2954.224 kb on + strand at 2954.224 kb on + strand at 2954.225 kb on - strand at 2954.260 kb on - strand at 2954.286 kb on - strand at 2954.300 kb on + strand at 2954.300 kb on + strand at 2954.301 kb on - strand at 2954.333 kb on + strand at 2954.340 kb on + strand at 2954.340 kb on + strand at 2954.340 kb on + strand at 2954.341 kb on - strand at 2954.344 kb on + strand at 2954.344 kb on + strand at 2954.345 kb on - strand at 2954.345 kb on - strand at 2954.348 kb on + strand at 2954.376 kb on + strand at 2954.377 kb on - strand at 2954.377 kb on - strand at 2954.380 kb on - strand at 2954.434 kb on + strand, within Echvi_2486 at 2954.435 kb on - strand, within Echvi_2486 at 2954.437 kb on + strand, within Echvi_2486 at 2954.445 kb on - strand, within Echvi_2486 at 2954.528 kb on - strand, within Echvi_2486 at 2954.531 kb on + strand, within Echvi_2486 at 2954.531 kb on + strand, within Echvi_2486 at 2954.531 kb on + strand, within Echvi_2486 at 2954.532 kb on - strand, within Echvi_2486 at 2954.532 kb on - strand, within Echvi_2486 at 2954.532 kb on - strand, within Echvi_2486 at 2954.532 kb on - strand, within Echvi_2486 at 2954.576 kb on - strand, within Echvi_2486 at 2954.581 kb on - strand, within Echvi_2486 at 2954.609 kb on - strand, within Echvi_2486 at 2954.609 kb on - strand, within Echvi_2486 at 2954.611 kb on - strand, within Echvi_2486 at 2954.644 kb on + strand, within Echvi_2486 at 2954.644 kb on + strand, within Echvi_2486 at 2954.668 kb on + strand, within Echvi_2486 at 2954.668 kb on + strand, within Echvi_2486 at 2954.668 kb on + strand, within Echvi_2486 at 2954.778 kb on + strand, within Echvi_2486 at 2954.778 kb on + strand, within Echvi_2486 at 2954.778 kb on + strand, within Echvi_2486 at 2954.779 kb on - strand, within Echvi_2486 at 2954.826 kb on + strand, within Echvi_2486 at 2954.827 kb on - strand, within Echvi_2486 at 2954.827 kb on - strand, within Echvi_2486 at 2954.827 kb on - strand, within Echvi_2486 at 2954.842 kb on - strand, within Echvi_2486 at 2955.008 kb on - strand at 2955.028 kb on - strand at 2955.077 kb on + strand at 2955.079 kb on + strand at 2955.080 kb on - strand at 2955.089 kb on + strand at 2955.089 kb on + strand at 2955.133 kb on + strand, within Echvi_2487 at 2955.183 kb on - strand, within Echvi_2487 at 2955.300 kb on - strand, within Echvi_2487 at 2955.376 kb on + strand, within Echvi_2487 at 2955.376 kb on + strand, within Echvi_2487 at 2955.377 kb on - strand, within Echvi_2487 at 2955.377 kb on - strand, within Echvi_2487 at 2955.440 kb on + strand, within Echvi_2487 at 2955.440 kb on + strand, within Echvi_2487 at 2955.441 kb on - strand, within Echvi_2487 at 2955.441 kb on - strand, within Echvi_2487 at 2955.441 kb on - strand, within Echvi_2487 at 2955.442 kb on + strand, within Echvi_2487 at 2955.442 kb on + strand, within Echvi_2487 at 2955.442 kb on + strand, within Echvi_2487 at 2955.443 kb on - strand, within Echvi_2487 at 2955.443 kb on - strand, within Echvi_2487 at 2955.443 kb on - strand, within Echvi_2487 at 2955.443 kb on - strand, within Echvi_2487 at 2955.445 kb on + strand, within Echvi_2487 at 2955.446 kb on - strand, within Echvi_2487 at 2955.446 kb on - strand, within Echvi_2487 at 2955.446 kb on - strand, within Echvi_2487 at 2955.446 kb on - strand, within Echvi_2487 at 2955.465 kb on + strand, within Echvi_2487 at 2955.466 kb on - strand, within Echvi_2487 at 2955.466 kb on - strand, within Echvi_2487 at 2955.476 kb on - strand, within Echvi_2487 at 2955.566 kb on + strand, within Echvi_2487 at 2955.567 kb on - strand, within Echvi_2487 at 2955.576 kb on + strand, within Echvi_2487 at 2955.693 kb on - strand, within Echvi_2487 at 2955.694 kb on + strand, within Echvi_2487 at 2955.694 kb on + strand, within Echvi_2487 at 2955.694 kb on + strand, within Echvi_2487 at 2955.694 kb on + strand, within Echvi_2487 at 2955.695 kb on - strand, within Echvi_2487 at 2955.698 kb on + strand, within Echvi_2487 at 2955.698 kb on + strand, within Echvi_2487 at 2955.698 kb on + strand, within Echvi_2487 at 2955.699 kb on - strand, within Echvi_2487 at 2955.733 kb on + strand, within Echvi_2487 at 2955.734 kb on - strand, within Echvi_2487 at 2955.756 kb on - strand, within Echvi_2487 at 2955.777 kb on - strand, within Echvi_2487 at 2955.794 kb on + strand, within Echvi_2487 at 2955.799 kb on + strand, within Echvi_2487 at 2955.799 kb on + strand, within Echvi_2487 at 2955.800 kb on - strand, within Echvi_2487 at 2955.884 kb on + strand, within Echvi_2487 at 2955.885 kb on - strand, within Echvi_2487 at 2955.897 kb on + strand, within Echvi_2487 at 2955.927 kb on + strand, within Echvi_2487 at 2955.928 kb on - strand, within Echvi_2487 at 2955.929 kb on + strand, within Echvi_2487 at 2955.930 kb on - strand, within Echvi_2487
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,953,400 + Echvi_2485 0.37 -1.7 2,953,400 + Echvi_2485 0.37 -0.9 2,953,401 - Echvi_2485 0.37 +0.2 2,953,422 + Echvi_2485 0.39 -1.1 2,953,423 - Echvi_2485 0.39 +0.2 2,953,423 - Echvi_2485 0.39 -0.7 2,953,423 - Echvi_2485 0.39 -1.1 2,953,423 - Echvi_2485 0.39 -0.4 2,953,483 + Echvi_2485 0.45 -1.2 2,953,484 - Echvi_2485 0.45 +0.0 2,953,484 - Echvi_2485 0.45 -0.1 2,953,490 - Echvi_2485 0.46 +0.6 2,953,490 - Echvi_2485 0.46 +0.5 2,953,558 - Echvi_2485 0.52 -1.1 2,953,568 + Echvi_2485 0.53 -0.5 2,953,568 + Echvi_2485 0.53 -0.1 2,953,568 + Echvi_2485 0.53 -0.8 2,953,568 + Echvi_2485 0.53 -0.7 2,953,645 + Echvi_2485 0.60 +0.5 2,953,646 - Echvi_2485 0.60 -0.8 2,953,654 + Echvi_2485 0.61 -1.2 2,953,654 + Echvi_2485 0.61 -0.1 2,953,663 + Echvi_2485 0.62 -0.0 2,953,664 - Echvi_2485 0.62 -0.0 2,953,708 + Echvi_2485 0.66 +1.9 2,953,766 + Echvi_2485 0.71 -0.5 2,953,766 + Echvi_2485 0.71 -0.3 2,953,784 + Echvi_2485 0.73 -0.1 2,953,852 + Echvi_2485 0.79 -0.3 2,953,852 + Echvi_2485 0.79 -0.3 2,953,852 + Echvi_2485 0.79 +0.0 2,953,853 - Echvi_2485 0.79 -0.1 2,953,853 - Echvi_2485 0.79 -1.0 2,953,853 - Echvi_2485 0.79 +0.2 2,953,908 + Echvi_2485 0.84 -1.4 2,953,917 - Echvi_2485 0.85 -0.9 2,953,934 - Echvi_2485 0.86 -1.0 2,953,934 - Echvi_2485 0.86 +0.3 2,953,936 - Echvi_2485 0.87 -0.5 2,953,948 + Echvi_2485 0.88 +0.1 2,953,949 - Echvi_2485 0.88 +1.1 2,953,960 - Echvi_2485 0.89 +0.8 2,954,008 + +1.3 2,954,023 + +0.3 2,954,067 + +0.6 2,954,084 + -0.1 2,954,084 + +1.1 2,954,085 - +0.1 2,954,085 - -1.4 2,954,085 - +0.1 2,954,095 + -0.6 2,954,104 - -1.2 2,954,152 + +0.6 2,954,172 + -0.4 2,954,172 + +0.6 2,954,173 - -0.6 2,954,173 - -0.8 2,954,173 - +0.2 2,954,173 - -2.1 2,954,175 + -0.7 2,954,180 - -0.1 2,954,196 + +0.3 2,954,213 + -0.4 2,954,224 + -0.5 2,954,224 + -0.5 2,954,224 + -2.6 2,954,224 + -0.5 2,954,224 + +1.5 2,954,225 - -1.1 2,954,260 - -0.4 2,954,286 - +0.3 2,954,300 + +0.7 2,954,300 + +0.6 2,954,301 - -0.5 2,954,333 + +0.3 2,954,340 + +1.9 2,954,340 + +0.6 2,954,340 + +1.5 2,954,341 - +0.2 2,954,344 + +0.1 2,954,344 + +1.1 2,954,345 - +0.8 2,954,345 - -1.4 2,954,348 + +0.9 2,954,376 + +0.8 2,954,377 - +0.3 2,954,377 - -0.2 2,954,380 - -0.2 2,954,434 + Echvi_2486 0.16 +0.0 2,954,435 - Echvi_2486 0.16 +1.1 2,954,437 + Echvi_2486 0.16 +0.4 2,954,445 - Echvi_2486 0.17 -0.3 2,954,528 - Echvi_2486 0.31 +1.1 2,954,531 + Echvi_2486 0.32 -0.9 2,954,531 + Echvi_2486 0.32 +0.4 2,954,531 + Echvi_2486 0.32 +1.0 2,954,532 - Echvi_2486 0.32 +0.5 2,954,532 - Echvi_2486 0.32 +0.3 2,954,532 - Echvi_2486 0.32 -0.4 2,954,532 - Echvi_2486 0.32 -0.2 2,954,576 - Echvi_2486 0.39 +0.2 2,954,581 - Echvi_2486 0.40 -0.2 2,954,609 - Echvi_2486 0.45 +0.2 2,954,609 - Echvi_2486 0.45 +0.5 2,954,611 - Echvi_2486 0.45 -0.6 2,954,644 + Echvi_2486 0.51 -0.7 2,954,644 + Echvi_2486 0.51 +0.2 2,954,668 + Echvi_2486 0.55 -0.7 2,954,668 + Echvi_2486 0.55 -0.1 2,954,668 + Echvi_2486 0.55 +1.8 2,954,778 + Echvi_2486 0.73 -0.2 2,954,778 + Echvi_2486 0.73 +0.8 2,954,778 + Echvi_2486 0.73 +0.0 2,954,779 - Echvi_2486 0.73 +0.0 2,954,826 + Echvi_2486 0.81 -0.9 2,954,827 - Echvi_2486 0.81 +0.5 2,954,827 - Echvi_2486 0.81 -0.0 2,954,827 - Echvi_2486 0.81 +1.0 2,954,842 - Echvi_2486 0.84 +1.0 2,955,008 - +0.2 2,955,028 - +1.5 2,955,077 + +0.8 2,955,079 + +0.8 2,955,080 - -0.3 2,955,089 + +0.6 2,955,089 + +0.3 2,955,133 + Echvi_2487 0.12 -0.4 2,955,183 - Echvi_2487 0.16 +0.3 2,955,300 - Echvi_2487 0.27 -0.3 2,955,376 + Echvi_2487 0.34 +0.2 2,955,376 + Echvi_2487 0.34 -1.0 2,955,377 - Echvi_2487 0.34 -0.7 2,955,377 - Echvi_2487 0.34 -0.4 2,955,440 + Echvi_2487 0.40 -0.2 2,955,440 + Echvi_2487 0.40 -1.0 2,955,441 - Echvi_2487 0.40 +0.0 2,955,441 - Echvi_2487 0.40 +0.0 2,955,441 - Echvi_2487 0.40 -0.4 2,955,442 + Echvi_2487 0.40 +0.4 2,955,442 + Echvi_2487 0.40 +0.5 2,955,442 + Echvi_2487 0.40 +1.2 2,955,443 - Echvi_2487 0.41 +1.3 2,955,443 - Echvi_2487 0.41 -0.6 2,955,443 - Echvi_2487 0.41 +0.4 2,955,443 - Echvi_2487 0.41 -0.4 2,955,445 + Echvi_2487 0.41 -1.8 2,955,446 - Echvi_2487 0.41 -0.4 2,955,446 - Echvi_2487 0.41 -0.2 2,955,446 - Echvi_2487 0.41 -0.5 2,955,446 - Echvi_2487 0.41 +0.7 2,955,465 + Echvi_2487 0.43 +0.1 2,955,466 - Echvi_2487 0.43 -1.5 2,955,466 - Echvi_2487 0.43 +0.6 2,955,476 - Echvi_2487 0.44 -1.0 2,955,566 + Echvi_2487 0.52 +0.7 2,955,567 - Echvi_2487 0.52 +0.5 2,955,576 + Echvi_2487 0.53 +0.0 2,955,693 - Echvi_2487 0.64 +0.5 2,955,694 + Echvi_2487 0.64 -0.2 2,955,694 + Echvi_2487 0.64 -1.5 2,955,694 + Echvi_2487 0.64 -0.5 2,955,694 + Echvi_2487 0.64 +0.9 2,955,695 - Echvi_2487 0.64 -1.7 2,955,698 + Echvi_2487 0.64 -0.7 2,955,698 + Echvi_2487 0.64 -0.5 2,955,698 + Echvi_2487 0.64 -1.1 2,955,699 - Echvi_2487 0.64 -0.3 2,955,733 + Echvi_2487 0.68 +0.9 2,955,734 - Echvi_2487 0.68 -0.1 2,955,756 - Echvi_2487 0.70 +0.8 2,955,777 - Echvi_2487 0.72 +1.5 2,955,794 + Echvi_2487 0.73 -1.0 2,955,799 + Echvi_2487 0.74 -0.2 2,955,799 + Echvi_2487 0.74 -0.5 2,955,800 - Echvi_2487 0.74 -3.0 2,955,884 + Echvi_2487 0.82 +0.7 2,955,885 - Echvi_2487 0.82 -0.4 2,955,897 + Echvi_2487 0.83 -1.7 2,955,927 + Echvi_2487 0.86 +1.5 2,955,928 - Echvi_2487 0.86 +1.1 2,955,929 + Echvi_2487 0.86 +0.9 2,955,930 - Echvi_2487 0.86 -0.0
Or see this region's nucleotide sequence