Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2376 and Echvi_2377 are separated by 84 nucleotides Echvi_2377 and Echvi_2378 are separated by 51 nucleotides
Echvi_2376: Echvi_2376 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 2,813,283 to 2,814,743
_2376
Echvi_2377: Echvi_2377 - hypothetical protein, at 2,814,828 to 2,814,980
_2377
Echvi_2378: Echvi_2378 - Uncharacterized protein conserved in bacteria, at 2,815,032 to 2,820,089
_2378
Position (kb)
2814
2815 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.867 kb on - strand, within Echvi_2376 at 2813.883 kb on - strand, within Echvi_2376 at 2813.952 kb on + strand, within Echvi_2376 at 2813.953 kb on - strand, within Echvi_2376 at 2814.038 kb on - strand, within Echvi_2376 at 2814.196 kb on - strand, within Echvi_2376 at 2814.351 kb on + strand, within Echvi_2376 at 2814.505 kb on - strand, within Echvi_2376 at 2814.626 kb on - strand at 2814.634 kb on - strand at 2814.732 kb on + strand at 2814.836 kb on - strand at 2814.905 kb on - strand, within Echvi_2377 at 2814.932 kb on + strand, within Echvi_2377 at 2814.942 kb on - strand, within Echvi_2377 at 2814.942 kb on - strand, within Echvi_2377 at 2814.994 kb on + strand at 2814.999 kb on - strand at 2814.999 kb on - strand at 2815.002 kb on - strand at 2815.002 kb on - strand at 2815.019 kb on + strand at 2815.076 kb on + strand at 2815.076 kb on + strand at 2815.077 kb on - strand at 2815.081 kb on + strand at 2815.082 kb on - strand at 2815.084 kb on + strand at 2815.084 kb on + strand at 2815.085 kb on - strand at 2815.102 kb on + strand at 2815.106 kb on + strand at 2815.106 kb on + strand at 2815.106 kb on + strand at 2815.112 kb on - strand at 2815.154 kb on + strand at 2815.154 kb on + strand at 2815.176 kb on + strand at 2815.187 kb on + strand at 2815.221 kb on + strand at 2815.221 kb on + strand at 2815.221 kb on + strand at 2815.221 kb on + strand at 2815.222 kb on - strand at 2815.260 kb on + strand at 2815.302 kb on - strand at 2815.325 kb on - strand at 2815.435 kb on + strand at 2815.551 kb on - strand, within Echvi_2378 at 2815.551 kb on - strand, within Echvi_2378 at 2815.551 kb on - strand, within Echvi_2378 at 2815.552 kb on + strand, within Echvi_2378 at 2815.552 kb on + strand, within Echvi_2378 at 2815.552 kb on + strand, within Echvi_2378 at 2815.552 kb on + strand, within Echvi_2378 at 2815.557 kb on + strand, within Echvi_2378 at 2815.598 kb on - strand, within Echvi_2378 at 2815.650 kb on + strand, within Echvi_2378 at 2815.690 kb on - strand, within Echvi_2378 at 2815.745 kb on + strand, within Echvi_2378 at 2815.745 kb on + strand, within Echvi_2378 at 2815.798 kb on - strand, within Echvi_2378 at 2815.831 kb on + strand, within Echvi_2378 at 2815.832 kb on - strand, within Echvi_2378 at 2815.846 kb on + strand, within Echvi_2378 at 2815.846 kb on + strand, within Echvi_2378 at 2815.847 kb on - strand, within Echvi_2378 at 2815.894 kb on + strand, within Echvi_2378 at 2815.913 kb on - strand, within Echvi_2378 at 2815.924 kb on + strand, within Echvi_2378 at 2815.925 kb on - strand, within Echvi_2378
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,813,867 - Echvi_2376 0.40 -0.8 2,813,867 - Echvi_2376 0.40 -0.6 2,813,867 - Echvi_2376 0.40 -1.7 2,813,867 - Echvi_2376 0.40 -0.2 2,813,867 - Echvi_2376 0.40 +0.8 2,813,867 - Echvi_2376 0.40 +1.0 2,813,867 - Echvi_2376 0.40 -0.3 2,813,867 - Echvi_2376 0.40 -0.0 2,813,883 - Echvi_2376 0.41 +0.8 2,813,952 + Echvi_2376 0.46 -1.2 2,813,953 - Echvi_2376 0.46 -0.9 2,814,038 - Echvi_2376 0.52 +0.7 2,814,196 - Echvi_2376 0.62 +0.3 2,814,351 + Echvi_2376 0.73 -1.4 2,814,505 - Echvi_2376 0.84 +0.4 2,814,626 - +1.8 2,814,634 - +0.2 2,814,732 + -0.4 2,814,836 - +0.2 2,814,905 - Echvi_2377 0.50 -0.4 2,814,932 + Echvi_2377 0.68 -0.4 2,814,942 - Echvi_2377 0.75 -2.3 2,814,942 - Echvi_2377 0.75 -0.8 2,814,994 + +1.0 2,814,999 - -1.5 2,814,999 - -0.0 2,815,002 - +0.8 2,815,002 - -0.3 2,815,019 + +0.0 2,815,076 + +0.1 2,815,076 + +1.4 2,815,077 - +0.7 2,815,081 + +0.5 2,815,082 - -1.1 2,815,084 + -0.8 2,815,084 + -0.0 2,815,085 - +0.1 2,815,102 + +0.3 2,815,106 + +0.0 2,815,106 + +0.4 2,815,106 + +1.0 2,815,112 - -0.3 2,815,154 + +2.0 2,815,154 + -0.7 2,815,176 + -0.7 2,815,187 + -0.8 2,815,221 + +0.4 2,815,221 + -0.7 2,815,221 + -0.4 2,815,221 + -0.7 2,815,222 - +0.9 2,815,260 + -1.6 2,815,302 - +0.4 2,815,325 - +0.3 2,815,435 + -0.4 2,815,551 - Echvi_2378 0.10 +0.5 2,815,551 - Echvi_2378 0.10 -0.3 2,815,551 - Echvi_2378 0.10 -0.4 2,815,552 + Echvi_2378 0.10 +1.1 2,815,552 + Echvi_2378 0.10 -1.0 2,815,552 + Echvi_2378 0.10 +1.5 2,815,552 + Echvi_2378 0.10 -0.1 2,815,557 + Echvi_2378 0.10 +1.2 2,815,598 - Echvi_2378 0.11 -0.5 2,815,650 + Echvi_2378 0.12 +0.7 2,815,690 - Echvi_2378 0.13 +0.8 2,815,745 + Echvi_2378 0.14 -0.4 2,815,745 + Echvi_2378 0.14 -0.2 2,815,798 - Echvi_2378 0.15 +1.2 2,815,831 + Echvi_2378 0.16 -0.6 2,815,832 - Echvi_2378 0.16 -0.2 2,815,846 + Echvi_2378 0.16 +0.5 2,815,846 + Echvi_2378 0.16 +0.2 2,815,847 - Echvi_2378 0.16 -1.1 2,815,894 + Echvi_2378 0.17 +0.6 2,815,913 - Echvi_2378 0.17 -0.1 2,815,924 + Echvi_2378 0.18 -1.0 2,815,925 - Echvi_2378 0.18 +0.7
Or see this region's nucleotide sequence