Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2296 and Echvi_2297 are separated by 103 nucleotides Echvi_2297 and Echvi_2298 are separated by 370 nucleotides Echvi_2298 and Echvi_2299 are separated by 31 nucleotides
Echvi_2296: Echvi_2296 - Arabinose efflux permease, at 2,718,867 to 2,720,048
_2296
Echvi_2297: Echvi_2297 - methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain, at 2,720,152 to 2,722,212
_2297
Echvi_2298: Echvi_2298 - hypothetical protein, at 2,722,583 to 2,722,810
_2298
Echvi_2299: Echvi_2299 - Phosphopantetheinyl transferase, at 2,722,842 to 2,723,618
_2299
Position (kb)
2720
2721
2722
2723 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2719.243 kb on - strand, within Echvi_2296 at 2719.244 kb on + strand, within Echvi_2296 at 2719.253 kb on + strand, within Echvi_2296 at 2719.253 kb on + strand, within Echvi_2296 at 2719.286 kb on - strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.521 kb on - strand, within Echvi_2296 at 2719.542 kb on + strand, within Echvi_2296 at 2719.555 kb on + strand, within Echvi_2296 at 2719.556 kb on - strand, within Echvi_2296 at 2719.591 kb on - strand, within Echvi_2296 at 2719.591 kb on - strand, within Echvi_2296 at 2719.649 kb on + strand, within Echvi_2296 at 2719.649 kb on + strand, within Echvi_2296 at 2719.650 kb on - strand, within Echvi_2296 at 2719.759 kb on + strand, within Echvi_2296 at 2719.799 kb on + strand, within Echvi_2296 at 2719.800 kb on - strand, within Echvi_2296 at 2719.905 kb on - strand, within Echvi_2296 at 2719.965 kb on - strand at 2719.985 kb on + strand at 2720.008 kb on - strand at 2720.066 kb on + strand at 2721.821 kb on + strand, within Echvi_2297 at 2721.864 kb on + strand, within Echvi_2297 at 2721.893 kb on + strand, within Echvi_2297 at 2721.893 kb on + strand, within Echvi_2297 at 2722.211 kb on - strand at 2722.219 kb on + strand at 2722.220 kb on - strand at 2722.327 kb on - strand at 2722.333 kb on + strand at 2722.343 kb on - strand at 2722.343 kb on - strand at 2722.345 kb on - strand at 2722.345 kb on - strand at 2722.422 kb on - strand at 2722.446 kb on - strand at 2722.558 kb on + strand at 2722.558 kb on + strand at 2722.558 kb on + strand at 2722.603 kb on + strand at 2722.718 kb on - strand, within Echvi_2298 at 2722.729 kb on + strand, within Echvi_2298 at 2722.777 kb on + strand, within Echvi_2298 at 2722.808 kb on + strand at 2722.841 kb on - strand at 2722.900 kb on + strand at 2722.901 kb on - strand at 2722.953 kb on + strand, within Echvi_2299 at 2722.953 kb on + strand, within Echvi_2299 at 2722.960 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.968 kb on - strand, within Echvi_2299 at 2722.968 kb on - strand, within Echvi_2299 at 2722.970 kb on - strand, within Echvi_2299 at 2723.020 kb on - strand, within Echvi_2299 at 2723.048 kb on + strand, within Echvi_2299 at 2723.063 kb on + strand, within Echvi_2299 at 2723.142 kb on + strand, within Echvi_2299
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,719,243 - Echvi_2296 0.32 +0.4 2,719,244 + Echvi_2296 0.32 +0.1 2,719,253 + Echvi_2296 0.33 -0.6 2,719,253 + Echvi_2296 0.33 -0.3 2,719,286 - Echvi_2296 0.35 +1.1 2,719,520 + Echvi_2296 0.55 -0.7 2,719,520 + Echvi_2296 0.55 -1.7 2,719,520 + Echvi_2296 0.55 -0.3 2,719,520 + Echvi_2296 0.55 -0.6 2,719,520 + Echvi_2296 0.55 +0.5 2,719,521 - Echvi_2296 0.55 +1.1 2,719,542 + Echvi_2296 0.57 -0.9 2,719,555 + Echvi_2296 0.58 +0.1 2,719,556 - Echvi_2296 0.58 -0.6 2,719,591 - Echvi_2296 0.61 +0.6 2,719,591 - Echvi_2296 0.61 -0.4 2,719,649 + Echvi_2296 0.66 -0.6 2,719,649 + Echvi_2296 0.66 +2.3 2,719,650 - Echvi_2296 0.66 +0.6 2,719,759 + Echvi_2296 0.75 -0.5 2,719,799 + Echvi_2296 0.79 -0.7 2,719,800 - Echvi_2296 0.79 -0.6 2,719,905 - Echvi_2296 0.88 -0.3 2,719,965 - +0.5 2,719,985 + +0.5 2,720,008 - -0.6 2,720,066 + -0.4 2,721,821 + Echvi_2297 0.81 +0.4 2,721,864 + Echvi_2297 0.83 -0.3 2,721,893 + Echvi_2297 0.84 +1.6 2,721,893 + Echvi_2297 0.84 -2.3 2,722,211 - +1.2 2,722,219 + +0.2 2,722,220 - -1.0 2,722,327 - -0.6 2,722,333 + -0.2 2,722,343 - -1.0 2,722,343 - +0.4 2,722,345 - +0.7 2,722,345 - -0.3 2,722,422 - +0.6 2,722,446 - -0.4 2,722,558 + -0.4 2,722,558 + -0.1 2,722,558 + -0.2 2,722,603 + +0.5 2,722,718 - Echvi_2298 0.59 +0.4 2,722,729 + Echvi_2298 0.64 +4.0 2,722,777 + Echvi_2298 0.85 +1.5 2,722,808 + +0.3 2,722,841 - -0.3 2,722,900 + +0.0 2,722,901 - -0.9 2,722,953 + Echvi_2299 0.14 +0.6 2,722,953 + Echvi_2299 0.14 +0.0 2,722,960 + Echvi_2299 0.15 -0.8 2,722,967 + Echvi_2299 0.16 +0.6 2,722,967 + Echvi_2299 0.16 -0.4 2,722,967 + Echvi_2299 0.16 +1.0 2,722,968 - Echvi_2299 0.16 -0.9 2,722,968 - Echvi_2299 0.16 +0.1 2,722,970 - Echvi_2299 0.16 -0.2 2,723,020 - Echvi_2299 0.23 -1.4 2,723,048 + Echvi_2299 0.27 -1.5 2,723,063 + Echvi_2299 0.28 +0.1 2,723,142 + Echvi_2299 0.39 -0.7
Or see this region's nucleotide sequence